RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 AFF2P51816 1311 aa18.66■□□□□ 0.58
ATRIP-208ENST00000639561 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
ATRIP-208ENST00000639561 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.58
ATRIP-208ENST00000639561 C8orf37Q96NL8 207 aa18.64■□□□□ 0.57
ATRIP-208ENST00000639561 MARF1Q9Y4F3 1742 aaKnown RBP18.64■□□□□ 0.57
ATRIP-208ENST00000639561 USP32Q8NFA0 1604 aa18.63■□□□□ 0.57
ATRIP-208ENST00000639561 PHF8Q9UPP1 1060 aa18.63■□□□□ 0.57
ATRIP-208ENST00000639561 SBNO2Q9Y2G9 1366 aa18.63■□□□□ 0.57
ATRIP-208ENST00000639561 AMER1Q5JTC6 1135 aaPredicted RBP18.62■□□□□ 0.57
ATRIP-208ENST00000639561 CDK12Q9NYV4 1490 aaPredicted RBP18.61■□□□□ 0.57
ATRIP-208ENST00000639561 XPCQ01831 940 aaPredicted RBP18.61■□□□□ 0.57
ATRIP-208ENST00000639561 KNSTRNQ9Y448 316 aa18.61■□□□□ 0.57
ATRIP-208ENST00000639561 TULP4Q9NRJ4 1543 aa18.61■□□□□ 0.57
ATRIP-208ENST00000639561 ADAMTS2O95450 1211 aa18.61■□□□□ 0.57
ATRIP-208ENST00000639561 SMG6Q86US8 1419 aaKnown RBP18.6■□□□□ 0.57
ATRIP-208ENST00000639561 CENPJQ9HC77 1338 aaPredicted RBP18.6■□□□□ 0.57
ATRIP-208ENST00000639561 RXRBP28702 533 aa18.6■□□□□ 0.57
ATRIP-208ENST00000639561 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
ATRIP-208ENST00000639561 PSME1Q06323 249 aa18.6■□□□□ 0.57
ATRIP-208ENST00000639561 NGLY1Q96IV0 654 aa18.6■□□□□ 0.57
ATRIP-208ENST00000639561 ITSN1Q15811 1721 aa18.59■□□□□ 0.57
ATRIP-208ENST00000639561 SPATA31A3Q5VYP0 1347 aa18.59■□□□□ 0.57
ATRIP-208ENST00000639561 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
ATRIP-208ENST00000639561 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
ATRIP-208ENST00000639561 KRT28Q7Z3Y7 464 aa18.59■□□□□ 0.57
ATRIP-208ENST00000639561 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
ATRIP-208ENST00000639561 TNS3Q68CZ2 1445 aa18.58■□□□□ 0.57
ATRIP-208ENST00000639561 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
ATRIP-208ENST00000639561 WASLO00401 505 aaPredicted RBP18.56■□□□□ 0.56
ATRIP-208ENST00000639561 NUDCQ9Y266 331 aa18.55■□□□□ 0.56
ATRIP-208ENST00000639561 QTRT2Q9H974 415 aaKnown RBP18.55■□□□□ 0.56
ATRIP-208ENST00000639561 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
ATRIP-208ENST00000639561 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
ATRIP-208ENST00000639561 RBM6P78332 1123 aaKnown RBP18.54■□□□□ 0.56
ATRIP-208ENST00000639561 PPP2R1AP30153 589 aa18.54■□□□□ 0.56
ATRIP-208ENST00000639561 FNBP4Q8N3X1 1017 aaPredicted RBP18.54■□□□□ 0.56
ATRIP-208ENST00000639561 USP21Q9UK80 565 aa18.54■□□□□ 0.56
ATRIP-208ENST00000639561 TRPM3Q9HCF6 1732 aaPredicted RBP18.53■□□□□ 0.56
ATRIP-208ENST00000639561 ABCA3Q99758 1704 aa18.53■□□□□ 0.56
ATRIP-208ENST00000639561 CARD14Q9BXL6 1004 aa18.53■□□□□ 0.56
ATRIP-208ENST00000639561 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.53■□□□□ 0.56
ATRIP-208ENST00000639561 BLMP54132 1417 aaPredicted RBP18.52■□□□□ 0.56
ATRIP-208ENST00000639561 PMFBP1Q8TBY8 1022 aa18.52■□□□□ 0.56
ATRIP-208ENST00000639561 TRPC5Q9UL62 973 aaPredicted RBP18.52■□□□□ 0.56
ATRIP-208ENST00000639561 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
ATRIP-208ENST00000639561 ATP7BP35670 1465 aa18.51■□□□□ 0.55
ATRIP-208ENST00000639561 INSRP06213 1382 aa18.51■□□□□ 0.55
ATRIP-208ENST00000639561 TOPAZ1Q8N9V7 1692 aa18.5■□□□□ 0.55
ATRIP-208ENST00000639561 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
ATRIP-208ENST00000639561 ATRNO75882 1429 aa18.5■□□□□ 0.55
ATRIP-208ENST00000639561 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
ATRIP-208ENST00000639561 RGS12O14924 1447 aa18.49■□□□□ 0.55
ATRIP-208ENST00000639561 LMOD2Q6P5Q4 547 aa18.48■□□□□ 0.55
ATRIP-208ENST00000639561 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
ATRIP-208ENST00000639561 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
ATRIP-208ENST00000639561 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
ATRIP-208ENST00000639561 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
ATRIP-208ENST00000639561 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
ATRIP-208ENST00000639561 NWD2Q9ULI1 1742 aa18.46■□□□□ 0.55
ATRIP-208ENST00000639561 CDK19Q9BWU1 502 aa18.46■□□□□ 0.55
ATRIP-208ENST00000639561 SLIT2O94813 1529 aa18.46■□□□□ 0.55
ATRIP-208ENST00000639561 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
ATRIP-208ENST00000639561 PLCH1Q4KWH8 1693 aa18.45■□□□□ 0.54
ATRIP-208ENST00000639561 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
ATRIP-208ENST00000639561 TSHZ2Q9NRE2 1034 aa18.45■□□□□ 0.54
ATRIP-208ENST00000639561 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
ATRIP-208ENST00000639561 NSD3Q9BZ95 1437 aa18.43■□□□□ 0.54
ATRIP-208ENST00000639561 UNC5CLQ8IV45 518 aa18.42■□□□□ 0.54
ATRIP-208ENST00000639561 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
ATRIP-208ENST00000639561 CRYBG1Q9Y4K1 1723 aa18.42■□□□□ 0.54
ATRIP-208ENST00000639561 CABLES1Q8TDN4 633 aa18.42■□□□□ 0.54
ATRIP-208ENST00000639561 UPF1Q92900 1129 aaKnown RBP eCLIP18.41■□□□□ 0.54
ATRIP-208ENST00000639561 POLR3AO14802 1390 aaPredicted RBP18.41■□□□□ 0.54
ATRIP-208ENST00000639561 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
ATRIP-208ENST00000639561 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
ATRIP-208ENST00000639561 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
ATRIP-208ENST00000639561 PAK3O75914 559 aaPredicted RBP18.4■□□□□ 0.54
ATRIP-208ENST00000639561 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
ATRIP-208ENST00000639561 PLEKHG5O94827 1062 aa18.39■□□□□ 0.53
ATRIP-208ENST00000639561 SRPK2P78362 688 aaKnown RBP18.39■□□□□ 0.53
ATRIP-208ENST00000639561 PDE3BQ13370 1112 aa18.39■□□□□ 0.53
ATRIP-208ENST00000639561 GJD4Q96KN9 370 aaPredicted RBP18.39■□□□□ 0.53
ATRIP-208ENST00000639561 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
ATRIP-208ENST00000639561 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
ATRIP-208ENST00000639561 CDCA7LQ96GN5 454 aa18.39■□□□□ 0.53
ATRIP-208ENST00000639561 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
ATRIP-208ENST00000639561 CABP2Q9NPB3 220 aa18.38■□□□□ 0.53
ATRIP-208ENST00000639561 ACEP12821 1306 aa18.37■□□□□ 0.53
ATRIP-208ENST00000639561 GLI3P10071 1580 aa18.37■□□□□ 0.53
ATRIP-208ENST00000639561 PHRF1Q9P1Y6 1649 aaKnown RBP18.37■□□□□ 0.53
ATRIP-208ENST00000639561 PPIP5K1Q6PFW1 1433 aa18.37■□□□□ 0.53
ATRIP-208ENST00000639561 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
ATRIP-208ENST00000639561 VPS72Q15906 364 aa18.35■□□□□ 0.53
ATRIP-208ENST00000639561 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
ATRIP-208ENST00000639561 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
ATRIP-208ENST00000639561 B4GALNT3Q6L9W6 998 aa18.33■□□□□ 0.52
ATRIP-208ENST00000639561 MORC1Q86VD1 984 aa18.32■□□□□ 0.52
ATRIP-208ENST00000639561 RCAN3Q9UKA8 241 aa18.32■□□□□ 0.52
ATRIP-208ENST00000639561 CGNL1Q0VF96 1302 aa18.31■□□□□ 0.52
ATRIP-208ENST00000639561 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms