RNA–Protein interactions for RNA: ENST00000639481.1

CROCCP2-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best) BASIC

Gene CROCCP2, Length 1,296 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-205ENST00000639481 FAM83GA6ND36 823 aa27.83■■■□□ 2.05
CROCCP2-205ENST00000639481 ATAD2Q6PL18 1390 aa27.83■■■□□ 2.05
CROCCP2-205ENST00000639481 POLR3AO14802 1390 aaPredicted RBP27.8■■■□□ 2.04
CROCCP2-205ENST00000639481 COL14A1Q05707 1796 aaKnown RBP27.8■■■□□ 2.04
CROCCP2-205ENST00000639481 PHRF1Q9P1Y6 1649 aaKnown RBP27.79■■■□□ 2.04
CROCCP2-205ENST00000639481 CENPJQ9HC77 1338 aaPredicted RBP27.79■■■□□ 2.04
CROCCP2-205ENST00000639481 PAK3O75914 559 aaPredicted RBP27.79■■■□□ 2.04
CROCCP2-205ENST00000639481 NEUROD1Q13562 356 aa27.79■■■□□ 2.04
CROCCP2-205ENST00000639481 VPS72Q15906 364 aa27.78■■■□□ 2.04
CROCCP2-205ENST00000639481 ACEP12821 1306 aa27.77■■■□□ 2.04
CROCCP2-205ENST00000639481 CCDC61Q9Y6R9 512 aa27.77■■■□□ 2.04
CROCCP2-205ENST00000639481 PLEKHG3A1L390 1219 aa27.75■■■□□ 2.03
CROCCP2-205ENST00000639481 NBPF8Q3BBV2 869 aa27.73■■■□□ 2.03
CROCCP2-205ENST00000639481 CABP2Q9NPB3 220 aa27.72■■■□□ 2.03
CROCCP2-205ENST00000639481 BTG4Q9NY30 223 aa27.72■■■□□ 2.03
CROCCP2-205ENST00000639481 PPIP5K1Q6PFW1 1433 aa27.71■■■□□ 2.03
CROCCP2-205ENST00000639481 SRPK2P78362 688 aaKnown RBP27.7■■■□□ 2.02
CROCCP2-205ENST00000639481 NUTM2GQ5VZR2 741 aa27.7■■■□□ 2.02
CROCCP2-205ENST00000639481 ONECUT3O60422 494 aaPredicted RBP27.69■■■□□ 2.02
CROCCP2-205ENST00000639481 SEPT12Q8IYM1 358 aa27.69■■■□□ 2.02
CROCCP2-205ENST00000639481 CCDC9Q9Y3X0 531 aaKnown RBP27.69■■■□□ 2.02
CROCCP2-205ENST00000639481 ROCK2O75116 1388 aaKnown RBP27.68■■■□□ 2.02
CROCCP2-205ENST00000639481 NRKQ7Z2Y5 1582 aa27.67■■■□□ 2.02
CROCCP2-205ENST00000639481 KIAA0232Q92628 1395 aa27.66■■■□□ 2.02
CROCCP2-205ENST00000639481 PRDM11Q9NQV5 511 aa27.64■■■□□ 2.02
CROCCP2-205ENST00000639481 CHRNA2Q15822 529 aa27.62■■■□□ 2.01
CROCCP2-205ENST00000639481 ZC3H6P61129 1189 aaKnown RBP27.61■■■□□ 2.01
CROCCP2-205ENST00000639481 FAM98CQ17RN3 349 aaKnown RBP27.61■■■□□ 2.01
CROCCP2-205ENST00000639481 CABP1Q9NZU7 370 aa27.61■■■□□ 2.01
CROCCP2-205ENST00000639481 ABTB2Q8N961 1025 aa27.6■■■□□ 2.01
CROCCP2-205ENST00000639481 USP19O94966 1318 aa27.6■■■□□ 2.01
CROCCP2-205ENST00000639481 SPATA31A5Q5VU36 1347 aa27.6■■■□□ 2.01
CROCCP2-205ENST00000639481 SPATA31A7Q8IWB4 1347 aa27.6■■■□□ 2.01
CROCCP2-205ENST00000639481 THSD7AQ9UPZ6 1657 aa27.59■■■□□ 2.01
CROCCP2-205ENST00000639481 LMO7Q8WWI1 1683 aa27.59■■■□□ 2.01
CROCCP2-205ENST00000639481 USP6P35125 1406 aa27.58■■■□□ 2.01
CROCCP2-205ENST00000639481 AKAP12Q02952 1782 aa27.58■■■□□ 2
CROCCP2-205ENST00000639481 PIK3C2AO00443 1686 aa27.57■■■□□ 2
CROCCP2-205ENST00000639481 KRT27Q7Z3Y8 459 aa27.57■■■□□ 2
CROCCP2-205ENST00000639481 CCDC125Q86Z20 511 aa27.57■■■□□ 2
CROCCP2-205ENST00000639481 EVC2Q86UK5 1308 aa27.57■■■□□ 2
CROCCP2-205ENST00000639481 BLMP54132 1417 aaPredicted RBP27.57■■■□□ 2
CROCCP2-205ENST00000639481 SSH2Q76I76 1423 aa27.56■■■□□ 2
CROCCP2-205ENST00000639481 CAMTA1Q9Y6Y1 1673 aa27.56■■■□□ 2
CROCCP2-205ENST00000639481 BRD4O60885 1362 aaPredicted RBP27.53■■■□□ 2
CROCCP2-205ENST00000639481 CPDO75976 1380 aa27.53■■■□□ 2
CROCCP2-205ENST00000639481 A0A0G2JS52 829 aa27.52■■■□□ 2
CROCCP2-205ENST00000639481 MYT1Q01538 1121 aa27.52■■■□□ 2
CROCCP2-205ENST00000639481 TRIM26Q12899 539 aaPredicted RBP27.52■■■□□ 2
CROCCP2-205ENST00000639481 SPATA31A1Q5TZJ5 1347 aa27.51■■□□□ 1.99
CROCCP2-205ENST00000639481 GCP02774 474 aa27.51■■□□□ 1.99
CROCCP2-205ENST00000639481 NLRP13Q86W25 1043 aa27.51■■□□□ 1.99
CROCCP2-205ENST00000639481 STRN4Q9NRL3 753 aa27.51■■□□□ 1.99
CROCCP2-205ENST00000639481 SLIT3O75094 1523 aa27.51■■□□□ 1.99
CROCCP2-205ENST00000639481 SRCAPQ6ZRS2 3230 aa27.5■■□□□ 1.99
CROCCP2-205ENST00000639481 TONSLQ96HA7 1378 aa27.5■■□□□ 1.99
CROCCP2-205ENST00000639481 DEFB132Q7Z7B7 95 aa27.49■■□□□ 1.99
CROCCP2-205ENST00000639481 SBNO2Q9Y2G9 1366 aa27.48■■□□□ 1.99
CROCCP2-205ENST00000639481 FAM182BQ5T319 152 aa27.47■■□□□ 1.99
CROCCP2-205ENST00000639481 CARD11Q9BXL7 1154 aa27.47■■□□□ 1.99
CROCCP2-205ENST00000639481 CPSF1Q10570 1443 aaKnown RBP27.46■■□□□ 1.99
CROCCP2-205ENST00000639481 MON2Q7Z3U7 1717 aa27.46■■□□□ 1.99
CROCCP2-205ENST00000639481 COL18A1P39060 1754 aa27.45■■□□□ 1.99
CROCCP2-205ENST00000639481 NLRP6P59044 892 aa27.45■■□□□ 1.98
CROCCP2-205ENST00000639481 LARP1Q6PKG0 1096 aaKnown RBP27.44■■□□□ 1.98
CROCCP2-205ENST00000639481 COL5A2P05997 1499 aaPredicted RBP27.44■■□□□ 1.98
CROCCP2-205ENST00000639481 TTC21BQ7Z4L5 1316 aa27.42■■□□□ 1.98
CROCCP2-205ENST00000639481 RGPD1P0DJD0 1748 aa27.42■■□□□ 1.98
CROCCP2-205ENST00000639481 TNS1Q9HBL0 1735 aaKnown RBP27.42■■□□□ 1.98
CROCCP2-205ENST00000639481 USP35Q9P2H5 1018 aa27.42■■□□□ 1.98
CROCCP2-205ENST00000639481 EVA1CP58658 441 aa27.41■■□□□ 1.98
CROCCP2-205ENST00000639481 CD163L1Q9NR16 1453 aa27.4■■□□□ 1.98
CROCCP2-205ENST00000639481 ZNF692Q9BU19 519 aaPredicted RBP27.4■■□□□ 1.98
CROCCP2-205ENST00000639481 ZRANB1Q9UGI0 708 aa27.4■■□□□ 1.98
CROCCP2-205ENST00000639481 RGPD5Q99666 1765 aa27.4■■□□□ 1.98
CROCCP2-205ENST00000639481 SF3B2Q13435 895 aaKnown RBP27.38■■□□□ 1.97
CROCCP2-205ENST00000639481 KTN1Q86UP2 1357 aaKnown RBP27.37■■□□□ 1.97
CROCCP2-205ENST00000639481 BARGINQ6ZT62 677 aa27.37■■□□□ 1.97
CROCCP2-205ENST00000639481 AATKQ6ZMQ8 1374 aa27.36■■□□□ 1.97
CROCCP2-205ENST00000639481 ZBTB7CA1YPR0 619 aa27.36■■□□□ 1.97
CROCCP2-205ENST00000639481 PARP4Q9UKK3 1724 aaKnown RBP27.36■■□□□ 1.97
CROCCP2-205ENST00000639481 NFAT5O94916 1531 aa27.35■■□□□ 1.97
CROCCP2-205ENST00000639481 TTC21AQ8NDW8 1320 aa27.35■■□□□ 1.97
CROCCP2-205ENST00000639481 USP54Q70EL1 1684 aa27.34■■□□□ 1.97
CROCCP2-205ENST00000639481 TCP11L2Q8N4U5 519 aa27.33■■□□□ 1.97
CROCCP2-205ENST00000639481 AXIN2Q9Y2T1 843 aa27.33■■□□□ 1.97
CROCCP2-205ENST00000639481 CRB1P82279 1406 aa27.33■■□□□ 1.96
CROCCP2-205ENST00000639481 WNK3Q9BYP7 1800 aa27.32■■□□□ 1.96
CROCCP2-205ENST00000639481 ARHGEF25Q86VW2 580 aa27.31■■□□□ 1.96
CROCCP2-205ENST00000639481 BAG6P46379 1132 aa27.3■■□□□ 1.96
CROCCP2-205ENST00000639481 TESK2Q96S53 571 aa27.3■■□□□ 1.96
CROCCP2-205ENST00000639481 SOX12O15370 315 aa27.29■■□□□ 1.96
CROCCP2-205ENST00000639481 SLC12A5Q9H2X9 1139 aa27.29■■□□□ 1.96
CROCCP2-205ENST00000639481 THRAP3Q9Y2W1 955 aaKnown RBP27.29■■□□□ 1.96
CROCCP2-205ENST00000639481 LRRC37A3O60309 1634 aa27.28■■□□□ 1.96
CROCCP2-205ENST00000639481 DISP2A7MBM2 1401 aa27.28■■□□□ 1.96
CROCCP2-205ENST00000639481 EN1Q05925 392 aaPredicted RBP27.28■■□□□ 1.96
CROCCP2-205ENST00000639481 ST20-MTHFSA0A0A6YYL1 179 aa27.27■■□□□ 1.96
CROCCP2-205ENST00000639481 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.27■■□□□ 1.96
CROCCP2-205ENST00000639481 TMC1Q8TDI8 760 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms