RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 AMHR2Q16671 573 aa9.97□□□□□ -0.81
CCDC7-214ENST00000639453 GIGYF2Q6Y7W6 1299 aaKnown RBP9.97□□□□□ -0.81
CCDC7-214ENST00000639453 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
CCDC7-214ENST00000639453 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
CCDC7-214ENST00000639453 TLL2Q9Y6L7 1015 aa9.96□□□□□ -0.82
CCDC7-214ENST00000639453 ADH1CP00326 375 aa9.95□□□□□ -0.82
CCDC7-214ENST00000639453 ZFP42Q96MM3 310 aa9.95□□□□□ -0.82
CCDC7-214ENST00000639453 ZMYND10O75800 440 aa9.94□□□□□ -0.82
CCDC7-214ENST00000639453 AGERQ15109 404 aa9.94□□□□□ -0.82
CCDC7-214ENST00000639453 MRPL14Q6P1L8 145 aaKnown RBP9.94□□□□□ -0.82
CCDC7-214ENST00000639453 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
CCDC7-214ENST00000639453 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
CCDC7-214ENST00000639453 WDR4P57081 412 aaKnown RBP9.93□□□□□ -0.82
CCDC7-214ENST00000639453 ARID5BQ14865 1188 aa9.93□□□□□ -0.82
CCDC7-214ENST00000639453 LYPD8Q6UX82 237 aa9.93□□□□□ -0.82
CCDC7-214ENST00000639453 TBC1D2Q9BYX2 928 aa9.93□□□□□ -0.82
CCDC7-214ENST00000639453 UPP2O95045 317 aa9.92□□□□□ -0.82
CCDC7-214ENST00000639453 GMPRP36959 345 aa9.92□□□□□ -0.82
CCDC7-214ENST00000639453 H3BM21 787 aa9.91□□□□□ -0.82
CCDC7-214ENST00000639453 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
CCDC7-214ENST00000639453 PURBQ96QR8 312 aaKnown RBP9.9□□□□□ -0.82
CCDC7-214ENST00000639453 VEGFBP49765 207 aa9.89□□□□□ -0.83
CCDC7-214ENST00000639453 NR5A1Q13285 461 aa9.89□□□□□ -0.83
CCDC7-214ENST00000639453 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
CCDC7-214ENST00000639453 PRPF38BQ5VTL8 546 aaKnown RBP9.89□□□□□ -0.83
CCDC7-214ENST00000639453 BPHLQ86WA6 291 aaPredicted RBP9.89□□□□□ -0.83
CCDC7-214ENST00000639453 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
CCDC7-214ENST00000639453 ZC3H15Q8WU90 426 aaKnown RBP9.89□□□□□ -0.83
CCDC7-214ENST00000639453 SPTLC1O15269 473 aa9.87□□□□□ -0.83
CCDC7-214ENST00000639453 MAN1A2O60476 641 aa9.87□□□□□ -0.83
CCDC7-214ENST00000639453 TIMP2P16035 220 aa9.87□□□□□ -0.83
CCDC7-214ENST00000639453 RIC3Q7Z5B4 369 aa9.87□□□□□ -0.83
CCDC7-214ENST00000639453 TSC1Q92574 1164 aa9.87□□□□□ -0.83
CCDC7-214ENST00000639453 CDK15Q96Q40 435 aa9.87□□□□□ -0.83
CCDC7-214ENST00000639453 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-214ENST00000639453 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-214ENST00000639453 ZIC2O95409 532 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-214ENST00000639453 HRCP23327 699 aa9.86□□□□□ -0.83
CCDC7-214ENST00000639453 NUTM2DQ5VT03 806 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-214ENST00000639453 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-214ENST00000639453 PCDHB15Q9Y5E8 787 aa9.85□□□□□ -0.83
CCDC7-214ENST00000639453 CFAP99D6REC4 459 aa9.84□□□□□ -0.83
CCDC7-214ENST00000639453 CSPP1Q1MSJ5 1256 aa9.84□□□□□ -0.83
CCDC7-214ENST00000639453 FOXJ1Q92949 421 aa9.84□□□□□ -0.83
CCDC7-214ENST00000639453 AK7Q96M32 723 aa9.84□□□□□ -0.83
CCDC7-214ENST00000639453 MAP10Q9P2G4 905 aa9.84□□□□□ -0.83
CCDC7-214ENST00000639453 PARP9Q8IXQ6 854 aa9.83□□□□□ -0.84
CCDC7-214ENST00000639453 BMP2P12643 396 aa9.82□□□□□ -0.84
CCDC7-214ENST00000639453 C6orf118Q5T5N4 469 aa9.82□□□□□ -0.84
CCDC7-214ENST00000639453 NBPF14Q5TI25 921 aa9.82□□□□□ -0.84
CCDC7-214ENST00000639453 HELBQ8NG08 1087 aaPredicted RBP9.82□□□□□ -0.84
CCDC7-214ENST00000639453 TRIM66O15016 1216 aa9.81□□□□□ -0.84
CCDC7-214ENST00000639453 F12P00748 615 aaPredicted RBP9.81□□□□□ -0.84
CCDC7-214ENST00000639453 ERBB4Q15303 1308 aa9.81□□□□□ -0.84
CCDC7-214ENST00000639453 KLF16Q9BXK1 252 aaPredicted RBP9.8□□□□□ -0.84
CCDC7-214ENST00000639453 CABLES1Q8TDN4 633 aa9.79□□□□□ -0.84
CCDC7-214ENST00000639453 ITPKCQ96DU7 683 aa9.79□□□□□ -0.84
CCDC7-214ENST00000639453 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
CCDC7-214ENST00000639453 SOBPA7XYQ1 873 aa9.77□□□□□ -0.85
CCDC7-214ENST00000639453 VSIG8P0DPA2 414 aa9.77□□□□□ -0.85
CCDC7-214ENST00000639453 VASH1Q7L8A9 365 aaPredicted RBP9.77□□□□□ -0.85
CCDC7-214ENST00000639453 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
CCDC7-214ENST00000639453 TSEN34Q9BSV6 310 aaKnown RBP9.77□□□□□ -0.85
CCDC7-214ENST00000639453 GRM5P41594 1212 aa9.76□□□□□ -0.85
CCDC7-214ENST00000639453 TUSC1Q2TAM9 212 aa9.76□□□□□ -0.85
CCDC7-214ENST00000639453 EMILIN1Q9Y6C2 1016 aa9.76□□□□□ -0.85
CCDC7-214ENST00000639453 MAGEB6P1A0A0J9YX57 407 aa9.75□□□□□ -0.85
CCDC7-214ENST00000639453 PER1O15534 1290 aaPredicted RBP9.75□□□□□ -0.85
CCDC7-214ENST00000639453 NR3C2P08235 984 aa9.75□□□□□ -0.85
CCDC7-214ENST00000639453 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
CCDC7-214ENST00000639453 MAP4K5Q9Y4K4 846 aa9.75□□□□□ -0.85
CCDC7-214ENST00000639453 FSHRP23945 695 aa9.74□□□□□ -0.85
CCDC7-214ENST00000639453 MEIOBQ8N635 442 aa9.74□□□□□ -0.85
CCDC7-214ENST00000639453 GPKOWQ92917 476 aaPredicted RBP eCLIP9.74□□□□□ -0.85
CCDC7-214ENST00000639453 MYSM1Q5VVJ2 828 aa9.73□□□□□ -0.85
CCDC7-214ENST00000639453 LILRB3O75022 631 aa9.72□□□□□ -0.85
CCDC7-214ENST00000639453 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
CCDC7-214ENST00000639453 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
CCDC7-214ENST00000639453 CCDC116Q8IYX3 515 aa9.72□□□□□ -0.85
CCDC7-214ENST00000639453 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
CCDC7-214ENST00000639453 PPFIA3O75145 1194 aa9.71□□□□□ -0.86
CCDC7-214ENST00000639453 LORP23490 312 aaPredicted RBP9.71□□□□□ -0.86
CCDC7-214ENST00000639453 PDE4DQ08499 809 aa9.71□□□□□ -0.86
CCDC7-214ENST00000639453 TRMT44Q8IYL2 757 aaKnown RBP9.71□□□□□ -0.86
CCDC7-214ENST00000639453 QPCTQ16769 361 aa9.7□□□□□ -0.86
CCDC7-214ENST00000639453 SH3RF1Q7Z6J0 888 aa9.7□□□□□ -0.86
CCDC7-214ENST00000639453 C1QTNF2Q9BXJ5 285 aa9.7□□□□□ -0.86
CCDC7-214ENST00000639453 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
CCDC7-214ENST00000639453 LIMD1Q9UGP4 676 aa9.7□□□□□ -0.86
CCDC7-214ENST00000639453 CLK2P49760 499 aaKnown RBP9.69□□□□□ -0.86
CCDC7-214ENST00000639453 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
CCDC7-214ENST00000639453 CDV3Q9UKY7 258 aaKnown RBP9.69□□□□□ -0.86
CCDC7-214ENST00000639453 TTLL8A6PVC2 850 aa9.68□□□□□ -0.86
CCDC7-214ENST00000639453 DHX9Q08211 1270 aaKnown RBP9.68□□□□□ -0.86
CCDC7-214ENST00000639453 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
CCDC7-214ENST00000639453 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
CCDC7-214ENST00000639453 SLC10A4Q96EP9 437 aa9.66□□□□□ -0.86
CCDC7-214ENST00000639453 ARHGAP9Q9BRR9 750 aa9.66□□□□□ -0.86
CCDC7-214ENST00000639453 DNMT3LQ9UJW3 386 aa9.66□□□□□ -0.86
CCDC7-214ENST00000639453 RNF225M0QZC1 329 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms