RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 IL27Q8NEV9 243 aa17.55■□□□□ 0.4
SCARB2-216ENST00000639300 SMC3Q9UQE7 1217 aa17.55■□□□□ 0.4
SCARB2-216ENST00000639300 CLASRPQ8N2M8 674 aaKnown RBP17.55■□□□□ 0.4
SCARB2-216ENST00000639300 NFE2L2Q16236 605 aa17.54■□□□□ 0.4
SCARB2-216ENST00000639300 UGGT2Q9NYU1 1516 aa17.54■□□□□ 0.4
SCARB2-216ENST00000639300 NEUROD6Q96NK8 337 aa17.54■□□□□ 0.4
SCARB2-216ENST00000639300 KIF14Q15058 1648 aa17.54■□□□□ 0.4
SCARB2-216ENST00000639300 GNAI2P04899 355 aa17.54■□□□□ 0.4
SCARB2-216ENST00000639300 FBLN1P23142 703 aa17.53■□□□□ 0.4
SCARB2-216ENST00000639300 NME9Q86XW9 330 aa17.53■□□□□ 0.4
SCARB2-216ENST00000639300 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
SCARB2-216ENST00000639300 ERC2O15083 957 aa17.53■□□□□ 0.4
SCARB2-216ENST00000639300 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
SCARB2-216ENST00000639300 RNF214Q8ND24 703 aa17.52■□□□□ 0.4
SCARB2-216ENST00000639300 ATP10BO94823 1461 aa17.52■□□□□ 0.4
SCARB2-216ENST00000639300 CD109Q6YHK3 1445 aa17.52■□□□□ 0.4
SCARB2-216ENST00000639300 MCM10Q7L590 875 aa17.52■□□□□ 0.39
SCARB2-216ENST00000639300 RNF20Q5VTR2 975 aa17.51■□□□□ 0.39
SCARB2-216ENST00000639300 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
SCARB2-216ENST00000639300 APPP05067 770 aa17.51■□□□□ 0.39
SCARB2-216ENST00000639300 CREBRFQ8IUR6 639 aa17.51■□□□□ 0.39
SCARB2-216ENST00000639300 FOSBP53539 338 aa17.5■□□□□ 0.39
SCARB2-216ENST00000639300 NINLQ9Y2I6 1382 aa17.5■□□□□ 0.39
SCARB2-216ENST00000639300 ATF3P18847 181 aa17.5■□□□□ 0.39
SCARB2-216ENST00000639300 BECN2A8MW95 431 aa17.49■□□□□ 0.39
SCARB2-216ENST00000639300 CAVIN1Q6NZI2 390 aaKnown RBP17.49■□□□□ 0.39
SCARB2-216ENST00000639300 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
SCARB2-216ENST00000639300 NOS1P29475 1434 aa17.49■□□□□ 0.39
SCARB2-216ENST00000639300 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
SCARB2-216ENST00000639300 RABEP1Q15276 862 aa17.48■□□□□ 0.39
SCARB2-216ENST00000639300 PRPF40AO75400 957 aaKnown RBP17.48■□□□□ 0.39
SCARB2-216ENST00000639300 MRE11P49959 708 aa17.48■□□□□ 0.39
SCARB2-216ENST00000639300 TPM4P67936 248 aa17.48■□□□□ 0.39
SCARB2-216ENST00000639300 TESK2Q96S53 571 aa17.48■□□□□ 0.39
SCARB2-216ENST00000639300 C14orf93Q9H972 538 aaKnown RBP17.48■□□□□ 0.39
SCARB2-216ENST00000639300 NKTRP30414 1462 aaKnown RBP17.48■□□□□ 0.39
SCARB2-216ENST00000639300 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
SCARB2-216ENST00000639300 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
SCARB2-216ENST00000639300 GPRASP1Q5JY77 1395 aa17.47■□□□□ 0.39
SCARB2-216ENST00000639300 GOLGA6L19H0YKK7 550 aa17.47■□□□□ 0.39
SCARB2-216ENST00000639300 IGHDP01880 384 aa17.47■□□□□ 0.39
SCARB2-216ENST00000639300 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-216ENST00000639300 SCAF11Q99590 1463 aaKnown RBP17.47■□□□□ 0.39
SCARB2-216ENST00000639300 TRIM27P14373 513 aa17.47■□□□□ 0.39
SCARB2-216ENST00000639300 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-216ENST00000639300 RASSF8Q8NHQ8 419 aa17.47■□□□□ 0.39
SCARB2-216ENST00000639300 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
SCARB2-216ENST00000639300 EXOC6BQ9Y2D4 811 aa17.47■□□□□ 0.39
SCARB2-216ENST00000639300 PROSER2Q86WR7 435 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-216ENST00000639300 FSD1Q9BTV5 496 aa17.47■□□□□ 0.39
SCARB2-216ENST00000639300 CPLX1O14810 134 aa17.46■□□□□ 0.39
SCARB2-216ENST00000639300 LRPPRCP42704 1394 aaKnown RBP17.46■□□□□ 0.39
SCARB2-216ENST00000639300 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
SCARB2-216ENST00000639300 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.39
SCARB2-216ENST00000639300 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
SCARB2-216ENST00000639300 CNTROBQ8N137 903 aa17.46■□□□□ 0.39
SCARB2-216ENST00000639300 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
SCARB2-216ENST00000639300 SRCIN1Q9C0H9 1055 aa17.45■□□□□ 0.38
SCARB2-216ENST00000639300 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
SCARB2-216ENST00000639300 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
SCARB2-216ENST00000639300 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
SCARB2-216ENST00000639300 CPLX2Q6PUV4 134 aaKnown RBP17.44■□□□□ 0.38
SCARB2-216ENST00000639300 SIL1Q9H173 461 aa17.43■□□□□ 0.38
SCARB2-216ENST00000639300 MCM4P33991 863 aa17.43■□□□□ 0.38
SCARB2-216ENST00000639300 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
SCARB2-216ENST00000639300 K7ELQ4 463 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-216ENST00000639300 SRGAP3O43295 1099 aa17.43■□□□□ 0.38
SCARB2-216ENST00000639300 FBXW7Q969H0 707 aa17.43■□□□□ 0.38
SCARB2-216ENST00000639300 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
SCARB2-216ENST00000639300 DHX29Q7Z478 1369 aaKnown RBP17.42■□□□□ 0.38
SCARB2-216ENST00000639300 SMARCA5O60264 1052 aaPredicted RBP17.42■□□□□ 0.38
SCARB2-216ENST00000639300 RBM33Q96EV2 1170 aaKnown RBP17.42■□□□□ 0.38
SCARB2-216ENST00000639300 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
SCARB2-216ENST00000639300 FAM43AQ8N2R8 423 aa17.42■□□□□ 0.38
SCARB2-216ENST00000639300 F6X3S4 739 aa17.42■□□□□ 0.38
SCARB2-216ENST00000639300 FANCAO15360 1455 aa17.41■□□□□ 0.38
SCARB2-216ENST00000639300 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
SCARB2-216ENST00000639300 TRDNQ13061 729 aa17.41■□□□□ 0.38
SCARB2-216ENST00000639300 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
SCARB2-216ENST00000639300 RALGAPBQ86X10 1494 aa17.41■□□□□ 0.38
SCARB2-216ENST00000639300 PRAG1Q86YV5 1406 aa17.4■□□□□ 0.38
SCARB2-216ENST00000639300 FIBPO43427 364 aa17.4■□□□□ 0.38
SCARB2-216ENST00000639300 CEBPAP49715 358 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-216ENST00000639300 SYNE3Q6ZMZ3 975 aa17.4■□□□□ 0.38
SCARB2-216ENST00000639300 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
SCARB2-216ENST00000639300 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
SCARB2-216ENST00000639300 WASLO00401 505 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-216ENST00000639300 MYL6BP14649 208 aa17.39■□□□□ 0.37
SCARB2-216ENST00000639300 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
SCARB2-216ENST00000639300 PARD3Q8TEW0 1356 aa17.39■□□□□ 0.37
SCARB2-216ENST00000639300 RAPGEF6Q8TEU7 1601 aa17.39■□□□□ 0.37
SCARB2-216ENST00000639300 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
SCARB2-216ENST00000639300 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-216ENST00000639300 CHMP4CQ96CF2 233 aa17.38■□□□□ 0.37
SCARB2-216ENST00000639300 FAM177BA6PVY3 158 aa17.38■□□□□ 0.37
SCARB2-216ENST00000639300 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
SCARB2-216ENST00000639300 IFT57Q9NWB7 429 aa17.38■□□□□ 0.37
SCARB2-216ENST00000639300 ALDH1L2Q3SY69 923 aa17.37■□□□□ 0.37
SCARB2-216ENST00000639300 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
SCARB2-216ENST00000639300 FYB1O15117 783 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms