RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
SCARB2-215ENST00000639145 PPP1R1BQ9UD71 204 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-215ENST00000639145 WDR7Q9Y4E6 1490 aa16.72■□□□□ 0.27
SCARB2-215ENST00000639145 PTCD1O75127 700 aaKnown RBP16.72■□□□□ 0.27
SCARB2-215ENST00000639145 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
SCARB2-215ENST00000639145 NOL10Q9BSC4 688 aaKnown RBP16.72■□□□□ 0.27
SCARB2-215ENST00000639145 FCHSD2O94868 740 aa16.71■□□□□ 0.27
SCARB2-215ENST00000639145 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
SCARB2-215ENST00000639145 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-215ENST00000639145 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-215ENST00000639145 WDR62O43379 1518 aa16.71■□□□□ 0.27
SCARB2-215ENST00000639145 HSP90AB4PQ58FF6 505 aa16.71■□□□□ 0.27
SCARB2-215ENST00000639145 GNAI3P08754 354 aa16.71■□□□□ 0.27
SCARB2-215ENST00000639145 RUFY2Q8WXA3 655 aa16.7■□□□□ 0.26
SCARB2-215ENST00000639145 KIF6Q6ZMV9 814 aa16.7■□□□□ 0.26
SCARB2-215ENST00000639145 SKAP1Q86WV1 359 aa16.7■□□□□ 0.26
SCARB2-215ENST00000639145 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
SCARB2-215ENST00000639145 MCM10Q7L590 875 aa16.7■□□□□ 0.26
SCARB2-215ENST00000639145 NOB1Q9ULX3 412 aaKnown RBP16.7■□□□□ 0.26
SCARB2-215ENST00000639145 A2MP01023 1474 aa16.7■□□□□ 0.26
SCARB2-215ENST00000639145 SF3B2Q13435 895 aaKnown RBP16.69■□□□□ 0.26
SCARB2-215ENST00000639145 KRT28Q7Z3Y7 464 aa16.69■□□□□ 0.26
SCARB2-215ENST00000639145 RASSF8Q8NHQ8 419 aa16.69■□□□□ 0.26
SCARB2-215ENST00000639145 TMPOP42166 694 aaKnown RBP16.69■□□□□ 0.26
SCARB2-215ENST00000639145 NGLY1Q96IV0 654 aa16.69■□□□□ 0.26
SCARB2-215ENST00000639145 NUP160Q12769 1436 aa16.69■□□□□ 0.26
SCARB2-215ENST00000639145 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
SCARB2-215ENST00000639145 BTBD11A6QL63 1104 aa16.68■□□□□ 0.26
SCARB2-215ENST00000639145 ZKSCAN1P17029 563 aaPredicted RBP16.68■□□□□ 0.26
SCARB2-215ENST00000639145 CLASRPQ8N2M8 674 aaKnown RBP16.68■□□□□ 0.26
SCARB2-215ENST00000639145 REC8O95072 547 aa16.68■□□□□ 0.26
SCARB2-215ENST00000639145 TEX14Q8IWB6 1497 aa16.68■□□□□ 0.26
SCARB2-215ENST00000639145 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
SCARB2-215ENST00000639145 DISP3Q9P2K9 1392 aa16.67■□□□□ 0.26
SCARB2-215ENST00000639145 CADPS2Q86UW7 1296 aa16.67■□□□□ 0.26
SCARB2-215ENST00000639145 HTATSF1O43719 755 aaKnown RBP16.67■□□□□ 0.26
SCARB2-215ENST00000639145 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
SCARB2-215ENST00000639145 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
SCARB2-215ENST00000639145 VPS53Q5VIR6 699 aa16.67■□□□□ 0.26
SCARB2-215ENST00000639145 IPO9Q96P70 1041 aaKnown RBP16.67■□□□□ 0.26
SCARB2-215ENST00000639145 NCKAP5LQ9HCH0 1330 aa16.67■□□□□ 0.26
SCARB2-215ENST00000639145 CHRNA2Q15822 529 aa16.66■□□□□ 0.26
SCARB2-215ENST00000639145 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
SCARB2-215ENST00000639145 ABCA5Q8WWZ7 1642 aa16.66■□□□□ 0.26
SCARB2-215ENST00000639145 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
SCARB2-215ENST00000639145 NRDCO43847 1150 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 DRC7Q8IY82 874 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 ACEP12821 1306 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 ZNF518AQ6AHZ1 1483 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 ERC2O15083 957 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 FYB1O15117 783 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
SCARB2-215ENST00000639145 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.26
SCARB2-215ENST00000639145 GOLGA6L6A8MZA4 724 aa16.64■□□□□ 0.26
SCARB2-215ENST00000639145 MARCH6O60337 910 aa16.64■□□□□ 0.26
SCARB2-215ENST00000639145 WDR63Q8IWG1 891 aa16.64■□□□□ 0.26
SCARB2-215ENST00000639145 KIF3AQ9Y496 699 aa16.64■□□□□ 0.26
SCARB2-215ENST00000639145 SF3A1Q15459 793 aaKnown RBP16.64■□□□□ 0.25
SCARB2-215ENST00000639145 AMOTL1Q8IY63 956 aa16.64■□□□□ 0.25
SCARB2-215ENST00000639145 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
SCARB2-215ENST00000639145 UHRF1BP1LA0JNW5 1464 aa16.64■□□□□ 0.25
SCARB2-215ENST00000639145 WWC1Q8IX03 1113 aa16.64■□□□□ 0.25
SCARB2-215ENST00000639145 SIL1Q9H173 461 aa16.64■□□□□ 0.25
SCARB2-215ENST00000639145 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
SCARB2-215ENST00000639145 AKAP17AQ02040 695 aaKnown RBP16.63■□□□□ 0.25
SCARB2-215ENST00000639145 SYNE3Q6ZMZ3 975 aa16.63■□□□□ 0.25
SCARB2-215ENST00000639145 FAM135AQ9P2D6 1515 aa16.63■□□□□ 0.25
SCARB2-215ENST00000639145 TRDNQ13061 729 aa16.63■□□□□ 0.25
SCARB2-215ENST00000639145 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
SCARB2-215ENST00000639145 H3BQV1 296 aa16.62■□□□□ 0.25
SCARB2-215ENST00000639145 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
SCARB2-215ENST00000639145 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-215ENST00000639145 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-215ENST00000639145 BICDL1Q6ZP65 573 aa16.62■□□□□ 0.25
SCARB2-215ENST00000639145 GNAI2P04899 355 aa16.62■□□□□ 0.25
SCARB2-215ENST00000639145 DHX16O60231 1041 aaKnown RBP16.62■□□□□ 0.25
SCARB2-215ENST00000639145 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
SCARB2-215ENST00000639145 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
SCARB2-215ENST00000639145 CPLX2Q6PUV4 134 aaKnown RBP16.61■□□□□ 0.25
SCARB2-215ENST00000639145 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
SCARB2-215ENST00000639145 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
SCARB2-215ENST00000639145 UBAP1LF5GYI3 381 aa16.6■□□□□ 0.25
SCARB2-215ENST00000639145 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
SCARB2-215ENST00000639145 ZRANB1Q9UGI0 708 aa16.6■□□□□ 0.25
SCARB2-215ENST00000639145 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
SCARB2-215ENST00000639145 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
SCARB2-215ENST00000639145 PBRM1Q86U86 1689 aa16.6■□□□□ 0.25
SCARB2-215ENST00000639145 CPLX1O14810 134 aa16.6■□□□□ 0.25
SCARB2-215ENST00000639145 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
SCARB2-215ENST00000639145 SCAF11Q99590 1463 aaKnown RBP16.59■□□□□ 0.25
SCARB2-215ENST00000639145 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
SCARB2-215ENST00000639145 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
SCARB2-215ENST00000639145 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
SCARB2-215ENST00000639145 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
SCARB2-215ENST00000639145 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.25
SCARB2-215ENST00000639145 TMOD3Q9NYL9 352 aa16.58■□□□□ 0.24
SCARB2-215ENST00000639145 CREBRFQ8IUR6 639 aa16.57■□□□□ 0.24
SCARB2-215ENST00000639145 ABCC10Q5T3U5 1492 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms