RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 POM121CA8CG34 1229 aa12.05□□□□□ -0.48
FAM49B-230ENST00000639004 FKBPLQ9UIM3 349 aa12.05□□□□□ -0.48
FAM49B-230ENST00000639004 WASHC4Q2M389 1173 aa12.04□□□□□ -0.48
FAM49B-230ENST00000639004 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
FAM49B-230ENST00000639004 VAC14Q08AM6 782 aa12.03□□□□□ -0.48
FAM49B-230ENST00000639004 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
FAM49B-230ENST00000639004 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
FAM49B-230ENST00000639004 FCF1Q9Y324 198 aaKnown RBP12.01□□□□□ -0.49
FAM49B-230ENST00000639004 CCDC82Q8N4S0 544 aa12□□□□□ -0.49
FAM49B-230ENST00000639004 UNC93B1Q9H1C4 597 aa12□□□□□ -0.49
FAM49B-230ENST00000639004 ARMC2Q8NEN0 867 aa11.99□□□□□ -0.49
FAM49B-230ENST00000639004 PPEF1O14829 653 aaPredicted RBP11.98□□□□□ -0.49
FAM49B-230ENST00000639004 ARID3AQ99856 593 aa11.98□□□□□ -0.49
FAM49B-230ENST00000639004 FBXO45P0C2W1 286 aa11.97□□□□□ -0.49
FAM49B-230ENST00000639004 NR1H3Q13133 447 aa11.97□□□□□ -0.49
FAM49B-230ENST00000639004 ADAMTS19Q8TE59 1207 aa11.97□□□□□ -0.49
FAM49B-230ENST00000639004 GPKOWQ92917 476 aaPredicted RBP eCLIP11.97□□□□□ -0.494e-6■■□□□ 12
FAM49B-230ENST00000639004 GLMNQ92990 594 aa11.97□□□□□ -0.49
FAM49B-230ENST00000639004 ZBBXA8MT70 800 aa11.96□□□□□ -0.49
FAM49B-230ENST00000639004 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
FAM49B-230ENST00000639004 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
FAM49B-230ENST00000639004 CALR3Q96L12 384 aaKnown RBP11.95□□□□□ -0.5
FAM49B-230ENST00000639004 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
FAM49B-230ENST00000639004 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
FAM49B-230ENST00000639004 ALG2Q9H553 416 aa11.94□□□□□ -0.5
FAM49B-230ENST00000639004 ANKLE1Q8NAG6 615 aa11.93□□□□□ -0.5
FAM49B-230ENST00000639004 CCDC97Q96F63 343 aaPredicted RBP11.93□□□□□ -0.5
FAM49B-230ENST00000639004 SERPINA10Q9UK55 444 aa11.93□□□□□ -0.5
FAM49B-230ENST00000639004 GPSM3Q9Y4H4 160 aa11.93□□□□□ -0.5
FAM49B-230ENST00000639004 SOX11P35716 441 aa11.92□□□□□ -0.5
FAM49B-230ENST00000639004 GGCXP38435 758 aa11.92□□□□□ -0.5
FAM49B-230ENST00000639004 PPP1R18Q6NYC8 613 aa11.92□□□□□ -0.5
FAM49B-230ENST00000639004 OCSTAMPQ9BR26 566 aa11.92□□□□□ -0.5
FAM49B-230ENST00000639004 PTK2Q05397 1052 aa11.91□□□□□ -0.5
FAM49B-230ENST00000639004 PLA2G2CQ5R387 149 aa11.91□□□□□ -0.5
FAM49B-230ENST00000639004 BAP1Q92560 729 aa11.91□□□□□ -0.5
FAM49B-230ENST00000639004 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
FAM49B-230ENST00000639004 EIF4G2P78344 907 aaKnown RBP eCLIP11.9□□□□□ -0.5
FAM49B-230ENST00000639004 SH3BP5LQ7L8J4 393 aa11.9□□□□□ -0.5
FAM49B-230ENST00000639004 LINC01559Q495D7 138 aa11.89□□□□□ -0.51
FAM49B-230ENST00000639004 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
FAM49B-230ENST00000639004 ARHGAP9Q9BRR9 750 aa11.88□□□□□ -0.51
FAM49B-230ENST00000639004 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
FAM49B-230ENST00000639004 ZNF511Q8NB15 262 aa11.87□□□□□ -0.51
FAM49B-230ENST00000639004 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
FAM49B-230ENST00000639004 FOXJ1Q92949 421 aa11.86□□□□□ -0.51
FAM49B-230ENST00000639004 ARXQ96QS3 562 aa11.86□□□□□ -0.51
FAM49B-230ENST00000639004 ZBTB24O43167 697 aaPredicted RBP11.85□□□□□ -0.51
FAM49B-230ENST00000639004 ADAM32Q8TC27 787 aa11.85□□□□□ -0.51
FAM49B-230ENST00000639004 SH3BP2P78314 561 aa11.84□□□□□ -0.51
FAM49B-230ENST00000639004 TRIM32Q13049 653 aa11.84□□□□□ -0.51
FAM49B-230ENST00000639004 C4orf48Q5BLP8 95 aa11.83□□□□□ -0.52
FAM49B-230ENST00000639004 BPHLQ86WA6 291 aaPredicted RBP11.83□□□□□ -0.52
FAM49B-230ENST00000639004 UCN2Q96RP3 112 aa11.83□□□□□ -0.52
FAM49B-230ENST00000639004 CARD14Q9BXL6 1004 aa11.83□□□□□ -0.52
FAM49B-230ENST00000639004 MAGEB6P1A0A0J9YX57 407 aa11.82□□□□□ -0.52
FAM49B-230ENST00000639004 ZBTB33Q86T24 672 aa11.82□□□□□ -0.52
FAM49B-230ENST00000639004 PCDHB9Q9Y5E1 797 aa11.82□□□□□ -0.52
FAM49B-230ENST00000639004 RPIAP49247 311 aa11.81□□□□□ -0.52
FAM49B-230ENST00000639004 AGERQ15109 404 aa11.81□□□□□ -0.52
FAM49B-230ENST00000639004 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
FAM49B-230ENST00000639004 EMID1Q96A84 441 aaPredicted RBP11.8□□□□□ -0.52
FAM49B-230ENST00000639004 PPP1R12CQ9BZL4 782 aa11.8□□□□□ -0.52
FAM49B-230ENST00000639004 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
FAM49B-230ENST00000639004 SKOR1P84550 965 aa11.79□□□□□ -0.52
FAM49B-230ENST00000639004 LIAT1Q6ZQX7 453 aa11.79□□□□□ -0.52
FAM49B-230ENST00000639004 ZNF592Q92610 1267 aa11.79□□□□□ -0.52
FAM49B-230ENST00000639004 C1QTNF2Q9BXJ5 285 aa11.79□□□□□ -0.52
FAM49B-230ENST00000639004 CFAP70Q5T0N1 1121 aa11.78□□□□□ -0.52
FAM49B-230ENST00000639004 HOMEZQ8IX15 550 aa11.78□□□□□ -0.52
FAM49B-230ENST00000639004 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
FAM49B-230ENST00000639004 PALM3A6NDB9 673 aaPredicted RBP11.77□□□□□ -0.53
FAM49B-230ENST00000639004 WNT7BP56706 349 aa11.77□□□□□ -0.53
FAM49B-230ENST00000639004 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.53
FAM49B-230ENST00000639004 CEP126Q9P2H0 1117 aa11.77□□□□□ -0.53
FAM49B-230ENST00000639004 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
FAM49B-230ENST00000639004 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
FAM49B-230ENST00000639004 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
FAM49B-230ENST00000639004 A0A0G2JS52 829 aa11.74□□□□□ -0.53
FAM49B-230ENST00000639004 CD2BP2O95400 341 aaKnown RBP11.74□□□□□ -0.53
FAM49B-230ENST00000639004 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
FAM49B-230ENST00000639004 PHTF2Q8N3S3 785 aa11.73□□□□□ -0.53
FAM49B-230ENST00000639004 FAM174AQ8TBP5 190 aa11.73□□□□□ -0.53
FAM49B-230ENST00000639004 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
FAM49B-230ENST00000639004 ATP9BO43861 1147 aa11.72□□□□□ -0.53
FAM49B-230ENST00000639004 RFX1P22670 979 aa11.72□□□□□ -0.53
FAM49B-230ENST00000639004 VARSP26640 1264 aaKnown RBP11.72□□□□□ -0.53
FAM49B-230ENST00000639004 NFATC2IPQ8NCF5 419 aa11.72□□□□□ -0.53
FAM49B-230ENST00000639004 MAFBQ9Y5Q3 323 aaPredicted RBP11.72□□□□□ -0.53
FAM49B-230ENST00000639004 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
FAM49B-230ENST00000639004 SLC19A1P41440 591 aa11.71□□□□□ -0.53
FAM49B-230ENST00000639004 SLFNL1Q499Z3 407 aa11.71□□□□□ -0.53
FAM49B-230ENST00000639004 SKIP12755 728 aa11.7□□□□□ -0.54
FAM49B-230ENST00000639004 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
FAM49B-230ENST00000639004 RNF135Q8IUD6 432 aa11.7□□□□□ -0.54
FAM49B-230ENST00000639004 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
FAM49B-230ENST00000639004 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
FAM49B-230ENST00000639004 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.68□□□□□ -0.54
FAM49B-230ENST00000639004 PPP1R15AO75807 674 aaPredicted RBP11.68□□□□□ -0.54
FAM49B-230ENST00000639004 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms