RNA–Protein interactions for RNA: ENST00000638605.1

ALK-206, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 1 (best)

Gene ALK, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-206ENST00000638605 ATF3P18847 181 aa16.77■□□□□ 0.28
ALK-206ENST00000638605 ZRANB1Q9UGI0 708 aa16.77■□□□□ 0.28
ALK-206ENST00000638605 PHF8Q9UPP1 1060 aa16.77■□□□□ 0.28
ALK-206ENST00000638605 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.28
ALK-206ENST00000638605 TTC21BQ7Z4L5 1316 aa16.77■□□□□ 0.27
ALK-206ENST00000638605 MSH6P52701 1360 aa16.75■□□□□ 0.27
ALK-206ENST00000638605 MTHFSP49914 203 aa16.74■□□□□ 0.27
ALK-206ENST00000638605 COG3Q96JB2 828 aa16.74■□□□□ 0.27
ALK-206ENST00000638605 ORAI2Q96SN7 254 aa16.74■□□□□ 0.27
ALK-206ENST00000638605 NCOA3Q9Y6Q9 1424 aa16.74■□□□□ 0.27
ALK-206ENST00000638605 LRRC7Q96NW7 1537 aa16.74■□□□□ 0.27
ALK-206ENST00000638605 WDR43Q15061 677 aaKnown RBP eCLIP16.74■□□□□ 0.27
ALK-206ENST00000638605 XIRP1Q702N8 1843 aaKnown RBP16.73■□□□□ 0.27
ALK-206ENST00000638605 DCCP43146 1447 aa16.72■□□□□ 0.27
ALK-206ENST00000638605 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
ALK-206ENST00000638605 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
ALK-206ENST00000638605 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
ALK-206ENST00000638605 FBLN1P23142 703 aa16.72■□□□□ 0.27
ALK-206ENST00000638605 C1orf167Q5SNV9 1468 aa16.71■□□□□ 0.27
ALK-206ENST00000638605 TTC21AQ8NDW8 1320 aa16.71■□□□□ 0.27
ALK-206ENST00000638605 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
ALK-206ENST00000638605 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
ALK-206ENST00000638605 PSME1Q06323 249 aa16.7■□□□□ 0.26
ALK-206ENST00000638605 MST1RQ04912 1400 aa16.7■□□□□ 0.26
ALK-206ENST00000638605 PPM1GO15355 546 aaPredicted RBP16.69■□□□□ 0.26
ALK-206ENST00000638605 FOXO3O43524 673 aa16.69■□□□□ 0.26
ALK-206ENST00000638605 XPCQ01831 940 aaPredicted RBP16.69■□□□□ 0.26
ALK-206ENST00000638605 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
ALK-206ENST00000638605 SOX12O15370 315 aa16.68■□□□□ 0.26
ALK-206ENST00000638605 NUTM2GQ5VZR2 741 aa16.68■□□□□ 0.26
ALK-206ENST00000638605 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
ALK-206ENST00000638605 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
ALK-206ENST00000638605 PIK3C2AO00443 1686 aa16.68■□□□□ 0.26
ALK-206ENST00000638605 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
ALK-206ENST00000638605 MAP2P11137 1827 aaKnown RBP16.67■□□□□ 0.26
ALK-206ENST00000638605 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
ALK-206ENST00000638605 ABTB2Q8N961 1025 aa16.66■□□□□ 0.26
ALK-206ENST00000638605 NLRP6P59044 892 aa16.66■□□□□ 0.26
ALK-206ENST00000638605 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
ALK-206ENST00000638605 POLKQ9UBT6 870 aa16.66■□□□□ 0.26
ALK-206ENST00000638605 EMILIN1Q9Y6C2 1016 aa16.65■□□□□ 0.26
ALK-206ENST00000638605 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
ALK-206ENST00000638605 BLMP54132 1417 aaPredicted RBP16.64■□□□□ 0.25
ALK-206ENST00000638605 AATKQ6ZMQ8 1374 aa16.64■□□□□ 0.25
ALK-206ENST00000638605 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
ALK-206ENST00000638605 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
ALK-206ENST00000638605 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
ALK-206ENST00000638605 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
ALK-206ENST00000638605 KRT28Q7Z3Y7 464 aa16.62■□□□□ 0.25
ALK-206ENST00000638605 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
ALK-206ENST00000638605 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
ALK-206ENST00000638605 USP31Q70CQ4 1352 aa16.62■□□□□ 0.25
ALK-206ENST00000638605 COL3A1P02461 1466 aaPredicted RBP16.62■□□□□ 0.25
ALK-206ENST00000638605 U2SURPO15042 1029 aaKnown RBP16.61■□□□□ 0.25
ALK-206ENST00000638605 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
ALK-206ENST00000638605 INSRP06213 1382 aa16.61■□□□□ 0.25
ALK-206ENST00000638605 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
ALK-206ENST00000638605 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
ALK-206ENST00000638605 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
ALK-206ENST00000638605 SLAIN2Q9P270 581 aa16.6■□□□□ 0.25
ALK-206ENST00000638605 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
ALK-206ENST00000638605 CDK12Q9NYV4 1490 aaPredicted RBP16.6■□□□□ 0.25
ALK-206ENST00000638605 SMG6Q86US8 1419 aaKnown RBP16.59■□□□□ 0.25
ALK-206ENST00000638605 PNPLA6Q8IY17 1366 aa16.59■□□□□ 0.25
ALK-206ENST00000638605 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
ALK-206ENST00000638605 BRINP3Q76B58 766 aa16.59■□□□□ 0.25
ALK-206ENST00000638605 NPHP3Q7Z494 1330 aa16.58■□□□□ 0.25
ALK-206ENST00000638605 TRPM3Q9HCF6 1732 aaPredicted RBP16.58■□□□□ 0.24
ALK-206ENST00000638605 USP54Q70EL1 1684 aa16.57■□□□□ 0.24
ALK-206ENST00000638605 MAP3K19Q56UN5 1328 aa16.56■□□□□ 0.24
ALK-206ENST00000638605 LTBP4Q8N2S1 1624 aa16.56■□□□□ 0.24
ALK-206ENST00000638605 PEAK1Q9H792 1746 aa16.55■□□□□ 0.24
ALK-206ENST00000638605 APAF1O14727 1248 aa16.54■□□□□ 0.24
ALK-206ENST00000638605 AMPHP49418 695 aa16.54■□□□□ 0.24
ALK-206ENST00000638605 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
ALK-206ENST00000638605 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
ALK-206ENST00000638605 SBNO1A3KN83 1393 aa16.53■□□□□ 0.24
ALK-206ENST00000638605 PXDNQ92626 1479 aa16.52■□□□□ 0.24
ALK-206ENST00000638605 RUNDC1Q96C34 613 aa16.52■□□□□ 0.24
ALK-206ENST00000638605 FLT4P35916 1363 aa16.52■□□□□ 0.23
ALK-206ENST00000638605 ALS2Q96Q42 1657 aa16.52■□□□□ 0.23
ALK-206ENST00000638605 IL13P35225 146 aa16.51■□□□□ 0.23
ALK-206ENST00000638605 KCNH5Q8NCM2 988 aa16.51■□□□□ 0.23
ALK-206ENST00000638605 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
ALK-206ENST00000638605 TNS3Q68CZ2 1445 aa16.5■□□□□ 0.23
ALK-206ENST00000638605 NFAT5O94916 1531 aa16.5■□□□□ 0.23
ALK-206ENST00000638605 LTN1O94822 1766 aa16.5■□□□□ 0.23
ALK-206ENST00000638605 HMOX1P09601 288 aa16.5■□□□□ 0.23
ALK-206ENST00000638605 GCP02774 474 aa16.49■□□□□ 0.23
ALK-206ENST00000638605 NEUROD2Q15784 382 aa16.49■□□□□ 0.23
ALK-206ENST00000638605 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
ALK-206ENST00000638605 SLIT3O75094 1523 aa16.49■□□□□ 0.23
ALK-206ENST00000638605 USP19O94966 1318 aa16.49■□□□□ 0.23
ALK-206ENST00000638605 SPATA31A3Q5VYP0 1347 aa16.49■□□□□ 0.23
ALK-206ENST00000638605 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
ALK-206ENST00000638605 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
ALK-206ENST00000638605 HOXC9P31274 260 aa16.48■□□□□ 0.23
ALK-206ENST00000638605 IQSEC2Q5JU85 1478 aa16.47■□□□□ 0.23
ALK-206ENST00000638605 FCHSD2O94868 740 aa16.46■□□□□ 0.23
ALK-206ENST00000638605 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms