RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 COL14A1Q05707 1796 aaKnown RBP20.62■□□□□ 0.89
KCNMA1-239ENST00000638531 ACEP12821 1306 aa20.62■□□□□ 0.89
KCNMA1-239ENST00000638531 ATAD2Q6PL18 1390 aa20.61■□□□□ 0.89
KCNMA1-239ENST00000638531 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
KCNMA1-239ENST00000638531 CCER1Q8TC90 406 aaPredicted RBP20.61■□□□□ 0.89
KCNMA1-239ENST00000638531 BRD4O60885 1362 aaPredicted RBP20.6■□□□□ 0.89
KCNMA1-239ENST00000638531 CDK12Q9NYV4 1490 aaPredicted RBP20.6■□□□□ 0.89
KCNMA1-239ENST00000638531 SLIT2O94813 1529 aa20.59■□□□□ 0.89
KCNMA1-239ENST00000638531 USP6P35125 1406 aa20.59■□□□□ 0.89
KCNMA1-239ENST00000638531 USP54Q70EL1 1684 aa20.58■□□□□ 0.89
KCNMA1-239ENST00000638531 NGLY1Q96IV0 654 aa20.58■□□□□ 0.89
KCNMA1-239ENST00000638531 USP47Q96K76 1375 aa20.58■□□□□ 0.88
KCNMA1-239ENST00000638531 LMOD2Q6P5Q4 547 aa20.57■□□□□ 0.88
KCNMA1-239ENST00000638531 FNBP4Q8N3X1 1017 aaPredicted RBP20.57■□□□□ 0.88
KCNMA1-239ENST00000638531 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
KCNMA1-239ENST00000638531 ATRNO75882 1429 aa20.55■□□□□ 0.88
KCNMA1-239ENST00000638531 SSH2Q76I76 1423 aa20.54■□□□□ 0.88
KCNMA1-239ENST00000638531 PAK3O75914 559 aaPredicted RBP20.54■□□□□ 0.88
KCNMA1-239ENST00000638531 HAP1P54257 671 aaPredicted RBP20.54■□□□□ 0.88
KCNMA1-239ENST00000638531 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
KCNMA1-239ENST00000638531 CPSF1Q10570 1443 aaKnown RBP20.53■□□□□ 0.88
KCNMA1-239ENST00000638531 CABP1Q9NZU7 370 aa20.53■□□□□ 0.88
KCNMA1-239ENST00000638531 MYOM1P52179 1685 aa20.52■□□□□ 0.88
KCNMA1-239ENST00000638531 TESK2Q96S53 571 aa20.52■□□□□ 0.88
KCNMA1-239ENST00000638531 USP21Q9UK80 565 aa20.52■□□□□ 0.88
KCNMA1-239ENST00000638531 SLIT3O75094 1523 aa20.52■□□□□ 0.87
KCNMA1-239ENST00000638531 GLI3P10071 1580 aa20.51■□□□□ 0.87
KCNMA1-239ENST00000638531 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
KCNMA1-239ENST00000638531 LMO7Q8WWI1 1683 aa20.51■□□□□ 0.87
KCNMA1-239ENST00000638531 CD163L1Q9NR16 1453 aa20.5■□□□□ 0.87
KCNMA1-239ENST00000638531 SLC24A1O60721 1099 aa20.5■□□□□ 0.87
KCNMA1-239ENST00000638531 PUS7Q96PZ0 661 aaKnown RBP20.5■□□□□ 0.87
KCNMA1-239ENST00000638531 RGS12O14924 1447 aa20.5■□□□□ 0.87
KCNMA1-239ENST00000638531 USP19O94966 1318 aa20.5■□□□□ 0.87
KCNMA1-239ENST00000638531 RXRBP28702 533 aa20.49■□□□□ 0.87
KCNMA1-239ENST00000638531 TRPC5Q9UL62 973 aaPredicted RBP20.49■□□□□ 0.87
KCNMA1-239ENST00000638531 NINLQ9Y2I6 1382 aa20.48■□□□□ 0.87
KCNMA1-239ENST00000638531 RBM6P78332 1123 aaKnown RBP20.48■□□□□ 0.87
KCNMA1-239ENST00000638531 QTRT2Q9H974 415 aaKnown RBP20.48■□□□□ 0.87
KCNMA1-239ENST00000638531 PLEKHG5O94827 1062 aa20.47■□□□□ 0.87
KCNMA1-239ENST00000638531 BRWD3Q6RI45 1802 aa20.47■□□□□ 0.87
KCNMA1-239ENST00000638531 ZNF692Q9BU19 519 aaPredicted RBP20.46■□□□□ 0.87
KCNMA1-239ENST00000638531 KTN1Q86UP2 1357 aaKnown RBP20.46■□□□□ 0.87
KCNMA1-239ENST00000638531 ABTB2Q8N961 1025 aa20.45■□□□□ 0.86
KCNMA1-239ENST00000638531 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.86
KCNMA1-239ENST00000638531 LTN1O94822 1766 aa20.44■□□□□ 0.86
KCNMA1-239ENST00000638531 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
KCNMA1-239ENST00000638531 UNC5CLQ8IV45 518 aa20.44■□□□□ 0.86
KCNMA1-239ENST00000638531 TTC21AQ8NDW8 1320 aa20.44■□□□□ 0.86
KCNMA1-239ENST00000638531 COL18A1P39060 1754 aa20.44■□□□□ 0.86
KCNMA1-239ENST00000638531 NLRP13Q86W25 1043 aa20.43■□□□□ 0.86
KCNMA1-239ENST00000638531 RGPD5Q99666 1765 aa20.43■□□□□ 0.86
KCNMA1-239ENST00000638531 CPDO75976 1380 aa20.43■□□□□ 0.86
KCNMA1-239ENST00000638531 KIAA0232Q92628 1395 aa20.43■□□□□ 0.86
KCNMA1-239ENST00000638531 NUTM2GQ5VZR2 741 aa20.42■□□□□ 0.86
KCNMA1-239ENST00000638531 TTC21BQ7Z4L5 1316 aa20.42■□□□□ 0.86
KCNMA1-239ENST00000638531 EDC4Q6P2E9 1401 aaKnown RBP20.42■□□□□ 0.86
KCNMA1-239ENST00000638531 FAM83GA6ND36 823 aa20.41■□□□□ 0.86
KCNMA1-239ENST00000638531 TMF1P82094 1093 aa20.41■□□□□ 0.86
KCNMA1-239ENST00000638531 A0A1W2PP64 1363 aa20.41■□□□□ 0.86
KCNMA1-239ENST00000638531 NFAT5O94916 1531 aa20.41■□□□□ 0.86
KCNMA1-239ENST00000638531 WNK3Q9BYP7 1800 aa20.4■□□□□ 0.86
KCNMA1-239ENST00000638531 PRDM11Q9NQV5 511 aa20.4■□□□□ 0.86
KCNMA1-239ENST00000638531 ABCC6O95255 1503 aa20.39■□□□□ 0.85
KCNMA1-239ENST00000638531 TMC1Q8TDI8 760 aa20.39■□□□□ 0.85
KCNMA1-239ENST00000638531 VPS72Q15906 364 aa20.38■□□□□ 0.85
KCNMA1-239ENST00000638531 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
KCNMA1-239ENST00000638531 GJD4Q96KN9 370 aaPredicted RBP20.38■□□□□ 0.85
KCNMA1-239ENST00000638531 SLC12A5Q9H2X9 1139 aa20.38■□□□□ 0.85
KCNMA1-239ENST00000638531 TERF2IPQ9NYB0 399 aa20.38■□□□□ 0.85
KCNMA1-239ENST00000638531 THSD7AQ9UPZ6 1657 aa20.38■□□□□ 0.85
KCNMA1-239ENST00000638531 CAMTA1Q9Y6Y1 1673 aa20.38■□□□□ 0.85
KCNMA1-239ENST00000638531 NLRP6P59044 892 aa20.37■□□□□ 0.85
KCNMA1-239ENST00000638531 BTG4Q9NY30 223 aa20.37■□□□□ 0.85
KCNMA1-239ENST00000638531 USP31Q70CQ4 1352 aa20.36■□□□□ 0.85
KCNMA1-239ENST00000638531 ANKRD36BQ8N2N9 1353 aa20.36■□□□□ 0.85
KCNMA1-239ENST00000638531 CDCA8Q53HL2 280 aa20.36■□□□□ 0.85
KCNMA1-239ENST00000638531 GCP02774 474 aa20.35■□□□□ 0.85
KCNMA1-239ENST00000638531 OVOS2A0A0J9YW53 1432 aa20.35■□□□□ 0.85
KCNMA1-239ENST00000638531 OVOS2Q6IE36 1432 aa20.35■□□□□ 0.85
KCNMA1-239ENST00000638531 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
KCNMA1-239ENST00000638531 COL5A2P05997 1499 aaPredicted RBP20.33■□□□□ 0.85
KCNMA1-239ENST00000638531 ANKRD26Q9UPS8 1709 aa20.33■□□□□ 0.84
KCNMA1-239ENST00000638531 EIF4G2P78344 907 aaKnown RBP eCLIP20.32■□□□□ 0.84
KCNMA1-239ENST00000638531 CHRNA2Q15822 529 aa20.32■□□□□ 0.84
KCNMA1-239ENST00000638531 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
KCNMA1-239ENST00000638531 PARP4Q9UKK3 1724 aaKnown RBP20.3■□□□□ 0.84
KCNMA1-239ENST00000638531 FAM208AQ9UK61 1670 aaKnown RBP20.3■□□□□ 0.84
KCNMA1-239ENST00000638531 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.3■□□□□ 0.84
KCNMA1-239ENST00000638531 KCNH5Q8NCM2 988 aa20.3■□□□□ 0.84
KCNMA1-239ENST00000638531 CCDC9Q9Y3X0 531 aaKnown RBP20.3■□□□□ 0.84
KCNMA1-239ENST00000638531 SPATA31A5Q5VU36 1347 aa20.29■□□□□ 0.84
KCNMA1-239ENST00000638531 SPATA31A7Q8IWB4 1347 aa20.29■□□□□ 0.84
KCNMA1-239ENST00000638531 EP400Q96L91 3159 aa20.29■□□□□ 0.84
KCNMA1-239ENST00000638531 HSPA5P11021 654 aaKnown RBP20.28■□□□□ 0.84
KCNMA1-239ENST00000638531 NME9Q86XW9 330 aa20.28■□□□□ 0.84
KCNMA1-239ENST00000638531 ONECUT3O60422 494 aaPredicted RBP20.26■□□□□ 0.83
KCNMA1-239ENST00000638531 ZRANB1Q9UGI0 708 aa20.25■□□□□ 0.83
KCNMA1-239ENST00000638531 SPATA31A1Q5TZJ5 1347 aa20.25■□□□□ 0.83
KCNMA1-239ENST00000638531 ARHGEF25Q86VW2 580 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms