RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
SCARB2-208ENST00000638372 ADGRL1O94910 1474 aa17.47■□□□□ 0.39
SCARB2-208ENST00000638372 TPM4P67936 248 aa17.47■□□□□ 0.39
SCARB2-208ENST00000638372 LRRFIP1Q32MZ4 808 aaKnown RBP17.46■□□□□ 0.39
SCARB2-208ENST00000638372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.46■□□□□ 0.39
SCARB2-208ENST00000638372 ZNF530Q6P9A1 599 aaPredicted RBP17.46■□□□□ 0.39
SCARB2-208ENST00000638372 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
SCARB2-208ENST00000638372 SMC3Q9UQE7 1217 aa17.45■□□□□ 0.38
SCARB2-208ENST00000638372 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
SCARB2-208ENST00000638372 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
SCARB2-208ENST00000638372 GNAI2P04899 355 aa17.45■□□□□ 0.38
SCARB2-208ENST00000638372 NUCB2P80303 420 aa17.45■□□□□ 0.38
SCARB2-208ENST00000638372 KIF14Q15058 1648 aa17.45■□□□□ 0.38
SCARB2-208ENST00000638372 CPLX1O14810 134 aa17.45■□□□□ 0.38
SCARB2-208ENST00000638372 NEK4P51957 841 aa17.45■□□□□ 0.38
SCARB2-208ENST00000638372 MIS18AQ9NYP9 233 aa17.44■□□□□ 0.38
SCARB2-208ENST00000638372 CT47B1P0C2W7 299 aaPredicted RBP17.44■□□□□ 0.38
SCARB2-208ENST00000638372 CPLX2Q6PUV4 134 aaKnown RBP17.44■□□□□ 0.38
SCARB2-208ENST00000638372 NFE2L2Q16236 605 aa17.43■□□□□ 0.38
SCARB2-208ENST00000638372 NME9Q86XW9 330 aa17.43■□□□□ 0.38
SCARB2-208ENST00000638372 TMEM57Q8N5G2 664 aa17.43■□□□□ 0.38
SCARB2-208ENST00000638372 FOSBP53539 338 aa17.43■□□□□ 0.38
SCARB2-208ENST00000638372 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
SCARB2-208ENST00000638372 BECN2A8MW95 431 aa17.42■□□□□ 0.38
SCARB2-208ENST00000638372 AKAP17AQ02040 695 aaKnown RBP17.42■□□□□ 0.38
SCARB2-208ENST00000638372 MSH5O43196 834 aa17.42■□□□□ 0.38
SCARB2-208ENST00000638372 SYNE3Q6ZMZ3 975 aa17.42■□□□□ 0.38
SCARB2-208ENST00000638372 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 EMILIN1Q9Y6C2 1016 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 TRDNQ13061 729 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 DISP3Q9P2K9 1392 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 MCM10Q7L590 875 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 ANKLE2Q86XL3 938 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 VPS37DQ86XT2 251 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
SCARB2-208ENST00000638372 GOLGA6L19H0YKK7 550 aa17.4■□□□□ 0.38
SCARB2-208ENST00000638372 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
SCARB2-208ENST00000638372 CNTROBQ8N137 903 aa17.4■□□□□ 0.38
SCARB2-208ENST00000638372 RBM33Q96EV2 1170 aaKnown RBP17.4■□□□□ 0.38
SCARB2-208ENST00000638372 MAPKBP1O60336 1514 aa17.39■□□□□ 0.38
SCARB2-208ENST00000638372 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
SCARB2-208ENST00000638372 CHD1LQ86WJ1 897 aa17.39■□□□□ 0.37
SCARB2-208ENST00000638372 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-208ENST00000638372 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
SCARB2-208ENST00000638372 TATP17735 454 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-208ENST00000638372 CHMP4CQ96CF2 233 aa17.38■□□□□ 0.37
SCARB2-208ENST00000638372 CCT4P50991 539 aaKnown RBP17.38■□□□□ 0.37
SCARB2-208ENST00000638372 SIL1Q9H173 461 aa17.38■□□□□ 0.37
SCARB2-208ENST00000638372 NOS1P29475 1434 aa17.37■□□□□ 0.37
SCARB2-208ENST00000638372 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
SCARB2-208ENST00000638372 MARCH6O60337 910 aa17.37■□□□□ 0.37
SCARB2-208ENST00000638372 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
SCARB2-208ENST00000638372 DNAJC2Q99543 621 aaKnown RBP17.37■□□□□ 0.37
SCARB2-208ENST00000638372 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
SCARB2-208ENST00000638372 ATP10BO94823 1461 aa17.36■□□□□ 0.37
SCARB2-208ENST00000638372 MYL6BP14649 208 aa17.36■□□□□ 0.37
SCARB2-208ENST00000638372 FBLN1P23142 703 aa17.36■□□□□ 0.37
SCARB2-208ENST00000638372 PES1O00541 588 aaKnown RBP17.36■□□□□ 0.37
SCARB2-208ENST00000638372 IL1RAPL2Q9NP60 686 aa17.36■□□□□ 0.37
SCARB2-208ENST00000638372 FANCAO15360 1455 aa17.36■□□□□ 0.37
SCARB2-208ENST00000638372 TRAK2O60296 914 aa17.36■□□□□ 0.37
SCARB2-208ENST00000638372 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
SCARB2-208ENST00000638372 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
SCARB2-208ENST00000638372 NFXL1Q6ZNB6 911 aa17.35■□□□□ 0.37
SCARB2-208ENST00000638372 RALYLQ86SE5 291 aaKnown RBP17.35■□□□□ 0.37
SCARB2-208ENST00000638372 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-208ENST00000638372 TRIM29Q14134 588 aa17.35■□□□□ 0.37
SCARB2-208ENST00000638372 C14orf93Q9H972 538 aaKnown RBP17.35■□□□□ 0.37
SCARB2-208ENST00000638372 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
SCARB2-208ENST00000638372 NUP153P49790 1475 aaKnown RBP17.34■□□□□ 0.37
SCARB2-208ENST00000638372 SRGAP3O43295 1099 aa17.34■□□□□ 0.37
SCARB2-208ENST00000638372 RNF214Q8ND24 703 aa17.34■□□□□ 0.37
SCARB2-208ENST00000638372 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
SCARB2-208ENST00000638372 RABEP1Q15276 862 aa17.33■□□□□ 0.37
SCARB2-208ENST00000638372 CCDC27Q2M243 656 aa17.33■□□□□ 0.37
SCARB2-208ENST00000638372 VPS53Q5VIR6 699 aa17.33■□□□□ 0.37
SCARB2-208ENST00000638372 FBXW7Q969H0 707 aa17.33■□□□□ 0.37
SCARB2-208ENST00000638372 RAD21O60216 631 aa17.33■□□□□ 0.37
SCARB2-208ENST00000638372 SCAF11Q99590 1463 aaKnown RBP17.33■□□□□ 0.36
SCARB2-208ENST00000638372 DHX29Q7Z478 1369 aaKnown RBP17.33■□□□□ 0.36
SCARB2-208ENST00000638372 PRDM11Q9NQV5 511 aa17.32■□□□□ 0.36
SCARB2-208ENST00000638372 WASLO00401 505 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-208ENST00000638372 UGGT2Q9NYU1 1516 aa17.32■□□□□ 0.36
SCARB2-208ENST00000638372 CABP4P57796 275 aa17.32■□□□□ 0.36
SCARB2-208ENST00000638372 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
SCARB2-208ENST00000638372 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
SCARB2-208ENST00000638372 AMOTL2Q9Y2J4 779 aa17.31■□□□□ 0.36
SCARB2-208ENST00000638372 BTBD11A6QL63 1104 aa17.31■□□□□ 0.36
SCARB2-208ENST00000638372 TPD52L1Q16890 204 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-208ENST00000638372 FOXO3O43524 673 aa17.3■□□□□ 0.36
SCARB2-208ENST00000638372 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
SCARB2-208ENST00000638372 KDM4AO75164 1064 aa17.3■□□□□ 0.36
SCARB2-208ENST00000638372 PRPF40AO75400 957 aaKnown RBP17.3■□□□□ 0.36
SCARB2-208ENST00000638372 FYB1O15117 783 aa17.3■□□□□ 0.36
SCARB2-208ENST00000638372 NOL10Q9BSC4 688 aaKnown RBP17.3■□□□□ 0.36
SCARB2-208ENST00000638372 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-208ENST00000638372 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms