RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 TESK2Q96S53 571 aa17.67■□□□□ 0.42
CLN6-225ENST00000638144 AKAP12Q02952 1782 aa17.66■□□□□ 0.42
CLN6-225ENST00000638144 HAP1P54257 671 aaPredicted RBP17.66■□□□□ 0.42
CLN6-225ENST00000638144 NGLY1Q96IV0 654 aa17.65■□□□□ 0.42
CLN6-225ENST00000638144 ATAD2Q6PL18 1390 aa17.65■□□□□ 0.42
CLN6-225ENST00000638144 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
CLN6-225ENST00000638144 USP6P35125 1406 aa17.63■□□□□ 0.41
CLN6-225ENST00000638144 PLCH1Q4KWH8 1693 aa17.62■□□□□ 0.41
CLN6-225ENST00000638144 TMC1Q8TDI8 760 aa17.62■□□□□ 0.41
CLN6-225ENST00000638144 NRKQ7Z2Y5 1582 aa17.61■□□□□ 0.41
CLN6-225ENST00000638144 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
CLN6-225ENST00000638144 MON2Q7Z3U7 1717 aa17.61■□□□□ 0.41
CLN6-225ENST00000638144 ZNF772Q68DY9 489 aaPredicted RBP17.6■□□□□ 0.41
CLN6-225ENST00000638144 CD163L1Q9NR16 1453 aa17.59■□□□□ 0.41
CLN6-225ENST00000638144 ABTB2Q8N961 1025 aa17.59■□□□□ 0.41
CLN6-225ENST00000638144 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
CLN6-225ENST00000638144 USP21Q9UK80 565 aa17.59■□□□□ 0.41
CLN6-225ENST00000638144 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
CLN6-225ENST00000638144 SSH2Q76I76 1423 aa17.57■□□□□ 0.4
CLN6-225ENST00000638144 KTN1Q86UP2 1357 aaKnown RBP17.57■□□□□ 0.4
CLN6-225ENST00000638144 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
CLN6-225ENST00000638144 QTRT2Q9H974 415 aaKnown RBP17.56■□□□□ 0.4
CLN6-225ENST00000638144 SLIT2O94813 1529 aa17.56■□□□□ 0.4
CLN6-225ENST00000638144 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
CLN6-225ENST00000638144 TMF1P82094 1093 aa17.55■□□□□ 0.4
CLN6-225ENST00000638144 FNBP4Q8N3X1 1017 aaPredicted RBP17.55■□□□□ 0.4
CLN6-225ENST00000638144 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.55■□□□□ 0.4
CLN6-225ENST00000638144 MYOM1P52179 1685 aa17.55■□□□□ 0.4
CLN6-225ENST00000638144 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
CLN6-225ENST00000638144 TTC21BQ7Z4L5 1316 aa17.54■□□□□ 0.4
CLN6-225ENST00000638144 COL14A1Q05707 1796 aaKnown RBP17.54■□□□□ 0.4
CLN6-225ENST00000638144 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
CLN6-225ENST00000638144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLN6-225ENST00000638144 ATRNO75882 1429 aa17.54■□□□□ 0.4
CLN6-225ENST00000638144 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
CLN6-225ENST00000638144 USP19O94966 1318 aa17.53■□□□□ 0.4
CLN6-225ENST00000638144 NRAPQ86VF7 1730 aa17.53■□□□□ 0.4
CLN6-225ENST00000638144 NWD2Q9ULI1 1742 aa17.53■□□□□ 0.4
CLN6-225ENST00000638144 ZC3H6P61129 1189 aaKnown RBP17.53■□□□□ 0.4
CLN6-225ENST00000638144 CHRNA2Q15822 529 aa17.53■□□□□ 0.4
CLN6-225ENST00000638144 RXRBP28702 533 aa17.52■□□□□ 0.4
CLN6-225ENST00000638144 NLRP6P59044 892 aa17.52■□□□□ 0.4
CLN6-225ENST00000638144 PRDM11Q9NQV5 511 aa17.52■□□□□ 0.4
CLN6-225ENST00000638144 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
CLN6-225ENST00000638144 BRD4O60885 1362 aaPredicted RBP17.52■□□□□ 0.39
CLN6-225ENST00000638144 ZBTB7CA1YPR0 619 aa17.51■□□□□ 0.39
CLN6-225ENST00000638144 SOX12O15370 315 aa17.51■□□□□ 0.39
CLN6-225ENST00000638144 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLN6-225ENST00000638144 HDGFL2Q7Z4V5 671 aaPredicted RBP17.51■□□□□ 0.39
CLN6-225ENST00000638144 POLR3GLQ9BT43 218 aa17.51■□□□□ 0.39
CLN6-225ENST00000638144 ZNF692Q9BU19 519 aaPredicted RBP17.51■□□□□ 0.39
CLN6-225ENST00000638144 RGS12O14924 1447 aa17.5■□□□□ 0.39
CLN6-225ENST00000638144 SOCS7O14512 581 aa17.5■□□□□ 0.39
CLN6-225ENST00000638144 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
CLN6-225ENST00000638144 NME9Q86XW9 330 aa17.5■□□□□ 0.39
CLN6-225ENST00000638144 UNC5CLQ8IV45 518 aa17.5■□□□□ 0.39
CLN6-225ENST00000638144 PUS7Q96PZ0 661 aaKnown RBP17.5■□□□□ 0.39
CLN6-225ENST00000638144 TRPC5Q9UL62 973 aaPredicted RBP17.5■□□□□ 0.39
CLN6-225ENST00000638144 SLIT3O75094 1523 aa17.5■□□□□ 0.39
CLN6-225ENST00000638144 GLI3P10071 1580 aa17.49■□□□□ 0.39
CLN6-225ENST00000638144 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
CLN6-225ENST00000638144 BTG4Q9NY30 223 aa17.49■□□□□ 0.39
CLN6-225ENST00000638144 TERF2IPQ9NYB0 399 aa17.49■□□□□ 0.39
CLN6-225ENST00000638144 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
CLN6-225ENST00000638144 EDC4Q6P2E9 1401 aaKnown RBP17.48■□□□□ 0.39
CLN6-225ENST00000638144 NINLQ9Y2I6 1382 aa17.48■□□□□ 0.39
CLN6-225ENST00000638144 GCP02774 474 aa17.47■□□□□ 0.39
CLN6-225ENST00000638144 LMO7Q8WWI1 1683 aa17.46■□□□□ 0.39
CLN6-225ENST00000638144 ANKRD36BQ8N2N9 1353 aa17.46■□□□□ 0.39
CLN6-225ENST00000638144 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
CLN6-225ENST00000638144 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.39
CLN6-225ENST00000638144 USP54Q70EL1 1684 aa17.45■□□□□ 0.38
CLN6-225ENST00000638144 CDCA8Q53HL2 280 aa17.45■□□□□ 0.38
CLN6-225ENST00000638144 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
CLN6-225ENST00000638144 NFAT5O94916 1531 aa17.44■□□□□ 0.38
CLN6-225ENST00000638144 GJD4Q96KN9 370 aaPredicted RBP17.44■□□□□ 0.38
CLN6-225ENST00000638144 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
CLN6-225ENST00000638144 CPDO75976 1380 aa17.43■□□□□ 0.38
CLN6-225ENST00000638144 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
CLN6-225ENST00000638144 RGPD5Q99666 1765 aa17.43■□□□□ 0.38
CLN6-225ENST00000638144 C11orf95C9JLR9 678 aaPredicted RBP17.42■□□□□ 0.38
CLN6-225ENST00000638144 VPS72Q15906 364 aa17.42■□□□□ 0.38
CLN6-225ENST00000638144 LTN1O94822 1766 aa17.42■□□□□ 0.38
CLN6-225ENST00000638144 KIF20BQ96Q89 1820 aa17.42■□□□□ 0.38
CLN6-225ENST00000638144 COL18A1P39060 1754 aa17.41■□□□□ 0.38
CLN6-225ENST00000638144 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
CLN6-225ENST00000638144 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
CLN6-225ENST00000638144 OVOS2A0A0J9YW53 1432 aa17.4■□□□□ 0.38
CLN6-225ENST00000638144 OVOS2Q6IE36 1432 aa17.4■□□□□ 0.38
CLN6-225ENST00000638144 NSD3Q9BZ95 1437 aa17.39■□□□□ 0.38
CLN6-225ENST00000638144 COL5A2P05997 1499 aaPredicted RBP17.38■□□□□ 0.37
CLN6-225ENST00000638144 CARD14Q9BXL6 1004 aa17.38■□□□□ 0.37
CLN6-225ENST00000638144 A0A0G2JS52 829 aa17.37■□□□□ 0.37
CLN6-225ENST00000638144 MYT1Q01538 1121 aa17.37■□□□□ 0.37
CLN6-225ENST00000638144 FAM98CQ17RN3 349 aaKnown RBP17.37■□□□□ 0.37
CLN6-225ENST00000638144 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
CLN6-225ENST00000638144 ARHGEF25Q86VW2 580 aa17.37■□□□□ 0.37
CLN6-225ENST00000638144 KCNH5Q8NCM2 988 aa17.37■□□□□ 0.37
CLN6-225ENST00000638144 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
CLN6-225ENST00000638144 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms