RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MFAP1P55081 439 aaKnown RBP14.89□□□□□ -0.03
CAPN3-221ENST00000638141 DDX49Q9Y6V7 483 aaKnown RBP14.89□□□□□ -0.03
CAPN3-221ENST00000638141 SLC20A2Q08357 652 aa14.88□□□□□ -0.03
CAPN3-221ENST00000638141 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-221ENST00000638141 ZNF710Q8N1W2 664 aa14.88□□□□□ -0.03
CAPN3-221ENST00000638141 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
CAPN3-221ENST00000638141 ARAP3Q8WWN8 1544 aa14.87□□□□□ -0.03
CAPN3-221ENST00000638141 KANK1Q14678 1352 aa14.87□□□□□ -0.03
CAPN3-221ENST00000638141 MYOM1P52179 1685 aa14.86□□□□□ -0.03
CAPN3-221ENST00000638141 BAG4O95429 457 aaKnown RBP14.86□□□□□ -0.03
CAPN3-221ENST00000638141 NEO1Q92859 1461 aa14.86□□□□□ -0.03
CAPN3-221ENST00000638141 YEATS2Q9ULM3 1422 aa14.86□□□□□ -0.03
CAPN3-221ENST00000638141 KIAA2012Q0VF49 1180 aa14.85□□□□□ -0.03
CAPN3-221ENST00000638141 ZSCAN23Q3MJ62 389 aa14.85□□□□□ -0.03
CAPN3-221ENST00000638141 RBSNQ9H1K0 784 aa14.85□□□□□ -0.03
CAPN3-221ENST00000638141 SAMD9LQ8IVG5 1584 aa14.85□□□□□ -0.03
CAPN3-221ENST00000638141 NBPF1Q3BBV0 1214 aa14.85□□□□□ -0.03
CAPN3-221ENST00000638141 APAF1O14727 1248 aa14.84□□□□□ -0.03
CAPN3-221ENST00000638141 CFAP74Q9C0B2 1584 aa14.84□□□□□ -0.03
CAPN3-221ENST00000638141 ADGRL1O94910 1474 aa14.84□□□□□ -0.03
CAPN3-221ENST00000638141 K7ELQ4 463 aaPredicted RBP14.83□□□□□ -0.03
CAPN3-221ENST00000638141 RAPGEF3O95398 923 aa14.83□□□□□ -0.03
CAPN3-221ENST00000638141 HNRNPMP52272 730 aaKnown RBP eCLIP14.83□□□□□ -0.03
CAPN3-221ENST00000638141 CBX1P83916 185 aa14.83□□□□□ -0.03
CAPN3-221ENST00000638141 IQGAP3Q86VI3 1631 aa14.83□□□□□ -0.04
CAPN3-221ENST00000638141 RARSP54136 660 aaKnown RBP14.83□□□□□ -0.04
CAPN3-221ENST00000638141 REREQ9P2R6 1566 aa14.82□□□□□ -0.04
CAPN3-221ENST00000638141 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-221ENST00000638141 ATP2B3Q16720 1220 aa14.82□□□□□ -0.04
CAPN3-221ENST00000638141 ARID3AQ99856 593 aa14.82□□□□□ -0.04
CAPN3-221ENST00000638141 POLR3AO14802 1390 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-221ENST00000638141 TPRNQ4KMQ1 711 aa14.82□□□□□ -0.04
CAPN3-221ENST00000638141 FEZ1Q99689 392 aa14.82□□□□□ -0.04
CAPN3-221ENST00000638141 KDM5AP29375 1690 aaKnown RBP14.81□□□□□ -0.04
CAPN3-221ENST00000638141 PLA2R1Q13018 1463 aa14.81□□□□□ -0.04
CAPN3-221ENST00000638141 SSFA2P28290 1259 aa14.81□□□□□ -0.04
CAPN3-221ENST00000638141 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
CAPN3-221ENST00000638141 KIF16BQ96L93 1317 aa14.81□□□□□ -0.04
CAPN3-221ENST00000638141 IQSEC2Q5JU85 1478 aa14.81□□□□□ -0.04
CAPN3-221ENST00000638141 ABCC1P33527 1531 aa14.81□□□□□ -0.04
CAPN3-221ENST00000638141 SYCP2Q9BX26 1530 aa14.81□□□□□ -0.04
CAPN3-221ENST00000638141 CT47B1P0C2W7 299 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-221ENST00000638141 GABPB1Q06547 395 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-221ENST00000638141 KIF3AQ9Y496 699 aa14.81□□□□□ -0.04
CAPN3-221ENST00000638141 NUCB2P80303 420 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 LRSAM1Q6UWE0 723 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 WDR63Q8IWG1 891 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 AFAP1Q8N556 730 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 ZNF830Q96NB3 372 aaPredicted RBP14.8□□□□□ -0.04
CAPN3-221ENST00000638141 LMBRD1Q9NUN5 540 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 MADDQ8WXG6 1647 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 WWC1Q8IX03 1113 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 PIBF1Q8WXW3 757 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 KIF2CQ99661 725 aa14.8□□□□□ -0.04
CAPN3-221ENST00000638141 DUOX2Q9NRD8 1548 aa14.79□□□□□ -0.04
CAPN3-221ENST00000638141 CYP2E1P05181 493 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-221ENST00000638141 TSPY4P0CV99 314 aa14.79□□□□□ -0.04
CAPN3-221ENST00000638141 TSPY10P0CW01 314 aa14.79□□□□□ -0.04
CAPN3-221ENST00000638141 PRIM1P49642 420 aaKnown RBP14.79□□□□□ -0.04
CAPN3-221ENST00000638141 MVPQ14764 893 aaKnown RBP14.79□□□□□ -0.04
CAPN3-221ENST00000638141 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
CAPN3-221ENST00000638141 TRAPPC8Q9Y2L5 1435 aa14.78□□□□□ -0.04
CAPN3-221ENST00000638141 SCAF11Q99590 1463 aaKnown RBP14.78□□□□□ -0.04
CAPN3-221ENST00000638141 CAVIN1Q6NZI2 390 aaKnown RBP14.78□□□□□ -0.04
CAPN3-221ENST00000638141 FTSJ3Q8IY81 847 aaKnown RBP14.78□□□□□ -0.04
CAPN3-221ENST00000638141 CCDC146Q8IYE0 955 aa14.78□□□□□ -0.04
CAPN3-221ENST00000638141 ANKRD7Q92527 254 aa14.78□□□□□ -0.04
CAPN3-221ENST00000638141 CCDC27Q2M243 656 aa14.77□□□□□ -0.04
CAPN3-221ENST00000638141 SPTLC3Q9NUV7 552 aa14.77□□□□□ -0.04
CAPN3-221ENST00000638141 KIAA1210Q9ULL0 1709 aa14.77□□□□□ -0.04
CAPN3-221ENST00000638141 RICTORQ6R327 1708 aa14.77□□□□□ -0.05
CAPN3-221ENST00000638141 RLBP1P12271 317 aa14.77□□□□□ -0.05
CAPN3-221ENST00000638141 CDK11BP21127 795 aaKnown RBP14.77□□□□□ -0.05
CAPN3-221ENST00000638141 PDCL2Q8N4E4 241 aa14.77□□□□□ -0.05
CAPN3-221ENST00000638141 SHPRHQ149N8 1683 aa14.76□□□□□ -0.05
CAPN3-221ENST00000638141 AK9Q5TCS8 1911 aa14.76□□□□□ -0.05
CAPN3-221ENST00000638141 FRMPD1Q5SYB0 1578 aa14.76□□□□□ -0.05
CAPN3-221ENST00000638141 CEP152O94986 1710 aa14.76□□□□□ -0.05
CAPN3-221ENST00000638141 POGZQ7Z3K3 1410 aa14.76□□□□□ -0.05
CAPN3-221ENST00000638141 FKBP5Q13451 457 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-221ENST00000638141 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.75□□□□□ -0.05
CAPN3-221ENST00000638141 DNAJC2Q99543 621 aaKnown RBP14.75□□□□□ -0.05
CAPN3-221ENST00000638141 BCL2L12Q9HB09 334 aa14.75□□□□□ -0.05
CAPN3-221ENST00000638141 OGFRQ9NZT2 677 aa14.75□□□□□ -0.05
CAPN3-221ENST00000638141 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
CAPN3-221ENST00000638141 SPHKAPQ2M3C7 1700 aa14.74□□□□□ -0.05
CAPN3-221ENST00000638141 CCDC66A2RUB6 948 aa14.74□□□□□ -0.05
CAPN3-221ENST00000638141 FAM193AP78312 1265 aa14.74□□□□□ -0.05
CAPN3-221ENST00000638141 GAS2L2Q8NHY3 880 aa14.74□□□□□ -0.05
CAPN3-221ENST00000638141 CGNQ9P2M7 1197 aaKnown RBP14.74□□□□□ -0.05
CAPN3-221ENST00000638141 ZNF518AQ6AHZ1 1483 aa14.73□□□□□ -0.05
CAPN3-221ENST00000638141 SYCP1Q15431 976 aa14.73□□□□□ -0.05
CAPN3-221ENST00000638141 NOLC1Q14978 699 aaKnown RBP eCLIP14.73□□□□□ -0.05
CAPN3-221ENST00000638141 BMP2KLQ5H9B9 411 aa14.73□□□□□ -0.05
CAPN3-221ENST00000638141 ZKSCAN2Q63HK3 967 aa14.73□□□□□ -0.05
CAPN3-221ENST00000638141 CFAP44Q96MT7 982 aa14.73□□□□□ -0.05
CAPN3-221ENST00000638141 CTIFO43310 598 aaKnown RBP14.72□□□□□ -0.05
CAPN3-221ENST00000638141 DNTTIP2Q5QJE6 756 aaKnown RBP14.72□□□□□ -0.05
CAPN3-221ENST00000638141 MCTP1Q6DN14 999 aa14.72□□□□□ -0.05
CAPN3-221ENST00000638141 CLTCL1P53675 1640 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms