RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CNTROBQ8N137 903 aa22.85■■□□□ 1.25
CACNA1A-257ENST00000638009 TAOK3Q9H2K8 898 aa22.85■■□□□ 1.25
CACNA1A-257ENST00000638009 PPP1R12BO60237 982 aaPredicted RBP22.84■■□□□ 1.25
CACNA1A-257ENST00000638009 HSPA5P11021 654 aaKnown RBP22.83■■□□□ 1.25
CACNA1A-257ENST00000638009 DDX12PQ92771 950 aa22.83■■□□□ 1.25
CACNA1A-257ENST00000638009 CCDC102AQ96A19 550 aa22.83■■□□□ 1.25
CACNA1A-257ENST00000638009 HMGB1P09429 215 aaKnown RBP22.83■■□□□ 1.25
CACNA1A-257ENST00000638009 FAM114A1Q8IWE2 563 aa22.83■■□□□ 1.25
CACNA1A-257ENST00000638009 API5Q9BZZ5 524 aaKnown RBP22.83■■□□□ 1.24
CACNA1A-257ENST00000638009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.83■■□□□ 1.24
CACNA1A-257ENST00000638009 ERCC6Q03468 1493 aa22.83■■□□□ 1.24
CACNA1A-257ENST00000638009 SREK1Q8WXA9 508 aaKnown RBP22.82■■□□□ 1.24
CACNA1A-257ENST00000638009 SPECC1LQ69YQ0 1117 aa22.82■■□□□ 1.24
CACNA1A-257ENST00000638009 AEBP2Q6ZN18 517 aaPredicted RBP22.82■■□□□ 1.24
CACNA1A-257ENST00000638009 SIN3AQ96ST3 1273 aa22.81■■□□□ 1.24
CACNA1A-257ENST00000638009 IKQ13123 557 aaPredicted RBP22.81■■□□□ 1.24
CACNA1A-257ENST00000638009 ERC1Q8IUD2 1116 aa22.81■■□□□ 1.24
CACNA1A-257ENST00000638009 C22orf23Q9BZE7 217 aa22.81■■□□□ 1.24
CACNA1A-257ENST00000638009 VPS36Q86VN1 386 aa22.8■■□□□ 1.24
CACNA1A-257ENST00000638009 BRPF1P55201 1214 aaPredicted RBP22.8■■□□□ 1.24
CACNA1A-257ENST00000638009 RRP1P56182 461 aaKnown RBP22.8■■□□□ 1.24
CACNA1A-257ENST00000638009 BMS1Q14692 1282 aaKnown RBP22.8■■□□□ 1.24
CACNA1A-257ENST00000638009 EPB41L2O43491 1005 aaKnown RBP22.8■■□□□ 1.24
CACNA1A-257ENST00000638009 HOOK3Q86VS8 718 aa22.8■■□□□ 1.24
CACNA1A-257ENST00000638009 TAF4BQ92750 862 aa22.8■■□□□ 1.24
CACNA1A-257ENST00000638009 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
CACNA1A-257ENST00000638009 DDX46Q7L014 1031 aaKnown RBP22.79■■□□□ 1.24
CACNA1A-257ENST00000638009 TBC1D2BQ9UPU7 963 aa22.79■■□□□ 1.24
CACNA1A-257ENST00000638009 ANKRD30AQ9BXX3 1397 aa22.79■■□□□ 1.24
CACNA1A-257ENST00000638009 KIAA1328Q86T90 577 aa22.79■■□□□ 1.24
CACNA1A-257ENST00000638009 FERP16591 822 aa22.79■■□□□ 1.24
CACNA1A-257ENST00000638009 AEBP1Q8IUX7 1158 aa22.79■■□□□ 1.24
CACNA1A-257ENST00000638009 BMP2KQ9NSY1 1161 aaPredicted RBP22.79■■□□□ 1.24
CACNA1A-257ENST00000638009 TRIM22Q8IYM9 498 aa22.77■■□□□ 1.24
CACNA1A-257ENST00000638009 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
CACNA1A-257ENST00000638009 BBXQ8WY36 941 aaPredicted RBP22.77■■□□□ 1.24
CACNA1A-257ENST00000638009 UBXN4Q92575 508 aa22.76■■□□□ 1.23
CACNA1A-257ENST00000638009 FMN1Q68DA7 1419 aa22.76■■□□□ 1.23
CACNA1A-257ENST00000638009 MYH10P35580 1976 aa22.76■■□□□ 1.23
CACNA1A-257ENST00000638009 CDKL5O76039 1030 aa22.75■■□□□ 1.23
CACNA1A-257ENST00000638009 TRAK2O60296 914 aa22.75■■□□□ 1.23
CACNA1A-257ENST00000638009 SMTNL1A8MU46 457 aa22.75■■□□□ 1.23
CACNA1A-257ENST00000638009 EVA1CP58658 441 aa22.75■■□□□ 1.23
CACNA1A-257ENST00000638009 UQCRHLA0A096LP55 91 aa22.74■■□□□ 1.23
CACNA1A-257ENST00000638009 UQCRHP07919 91 aa22.74■■□□□ 1.23
CACNA1A-257ENST00000638009 SETSIPP0DME0 302 aa22.74■■□□□ 1.23
CACNA1A-257ENST00000638009 FAM193AP78312 1265 aa22.74■■□□□ 1.23
CACNA1A-257ENST00000638009 POTEB2H3BUK9 544 aa22.74■■□□□ 1.23
CACNA1A-257ENST00000638009 FERMT1Q9BQL6 677 aa22.73■■□□□ 1.23
CACNA1A-257ENST00000638009 TNMDQ9H2S6 317 aa22.73■■□□□ 1.23
CACNA1A-257ENST00000638009 ARHGAP29Q52LW3 1261 aa22.73■■□□□ 1.23
CACNA1A-257ENST00000638009 WDR66Q8TBY9 1149 aa22.73■■□□□ 1.23
CACNA1A-257ENST00000638009 CCDC83Q8IWF9 413 aa22.73■■□□□ 1.23
CACNA1A-257ENST00000638009 CDC45O75419 566 aa22.72■■□□□ 1.23
CACNA1A-257ENST00000638009 TICAM2Q86XR7 235 aa22.72■■□□□ 1.23
CACNA1A-257ENST00000638009 ZSCAN12O43309 604 aa22.72■■□□□ 1.23
CACNA1A-257ENST00000638009 COG3Q96JB2 828 aa22.72■■□□□ 1.23
CACNA1A-257ENST00000638009 STK38Q15208 465 aa22.72■■□□□ 1.23
CACNA1A-257ENST00000638009 DCAF8L1A6NGE4 600 aa22.71■■□□□ 1.23
CACNA1A-257ENST00000638009 IFFO1Q0D2I5 559 aa22.71■■□□□ 1.23
CACNA1A-257ENST00000638009 CARMIL2Q6F5E8 1435 aa22.71■■□□□ 1.23
CACNA1A-257ENST00000638009 CCDC18Q5T9S5 1454 aa22.71■■□□□ 1.23
CACNA1A-257ENST00000638009 NAA15Q9BXJ9 866 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-257ENST00000638009 FGFR1OPO95684 399 aaKnown RBP22.7■■□□□ 1.22
CACNA1A-257ENST00000638009 KIF3CO14782 793 aa22.7■■□□□ 1.22
CACNA1A-257ENST00000638009 TANGO6Q9C0B7 1094 aa22.7■■□□□ 1.22
CACNA1A-257ENST00000638009 KIF18AQ8NI77 898 aa22.69■■□□□ 1.22
CACNA1A-257ENST00000638009 EVC2Q86UK5 1308 aa22.69■■□□□ 1.22
CACNA1A-257ENST00000638009 CCDC150Q8NCX0 1101 aa22.69■■□□□ 1.22
CACNA1A-257ENST00000638009 WDR33Q9C0J8 1336 aaKnown RBP22.69■■□□□ 1.22
CACNA1A-257ENST00000638009 KRT85P78386 507 aa22.69■■□□□ 1.22
CACNA1A-257ENST00000638009 HOMER2Q9NSB8 354 aa22.69■■□□□ 1.22
CACNA1A-257ENST00000638009 GSTTP1A0A1W2PQM5 241 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 NFKBIBQ15653 356 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 ERICH4A6NGS2 130 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 CCDC6Q16204 474 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 PKD2Q13563 968 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 SWAP70Q9UH65 585 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 FMNL2Q96PY5 1086 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 NUP155O75694 1391 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 KIF5CO60282 957 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 TIGD1Q96MW7 591 aa22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 GTPBP4Q9BZE4 634 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-257ENST00000638009 SPC24Q8NBT2 197 aa22.67■■□□□ 1.22
CACNA1A-257ENST00000638009 NOL7Q9UMY1 257 aaKnown RBP22.67■■□□□ 1.22
CACNA1A-257ENST00000638009 SPA17Q15506 151 aa22.67■■□□□ 1.22
CACNA1A-257ENST00000638009 ANKS4BQ8N8V4 417 aa22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 CEP57L1Q8IYX8 460 aa22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 RNF214Q8ND24 703 aa22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 CGNQ9P2M7 1197 aaKnown RBP22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 PABPN1LA6NDY0 278 aaKnown RBP22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 WASHC4Q2M389 1173 aa22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 GNL3LQ9NVN8 582 aaKnown RBP22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 NOL3O60936 208 aaKnown RBP22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 CCDC27Q2M243 656 aa22.66■■□□□ 1.22
CACNA1A-257ENST00000638009 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
CACNA1A-257ENST00000638009 SOGA3Q5TF21 947 aa22.65■■□□□ 1.22
CACNA1A-257ENST00000638009 FSD2A1L4K1 749 aa22.65■■□□□ 1.22
CACNA1A-257ENST00000638009 NAP1L3Q99457 506 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms