RNA–Protein interactions for RNA: ENST00000637966.1

CACNA1A-255, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,887 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-255ENST00000637966 USP6P35125 1406 aa16.59■□□□□ 0.25
CACNA1A-255ENST00000637966 ATF3P18847 181 aa16.58■□□□□ 0.24
CACNA1A-255ENST00000637966 NME9Q86XW9 330 aa16.58■□□□□ 0.24
CACNA1A-255ENST00000637966 ESCO1Q5FWF5 840 aa16.57■□□□□ 0.24
CACNA1A-255ENST00000637966 SSH2Q76I76 1423 aa16.57■□□□□ 0.24
CACNA1A-255ENST00000637966 DCCP43146 1447 aa16.56■□□□□ 0.24
CACNA1A-255ENST00000637966 LRRC7Q96NW7 1537 aa16.56■□□□□ 0.24
CACNA1A-255ENST00000637966 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-255ENST00000637966 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
CACNA1A-255ENST00000637966 TTC21AQ8NDW8 1320 aa16.55■□□□□ 0.24
CACNA1A-255ENST00000637966 MTHFSP49914 203 aa16.54■□□□□ 0.24
CACNA1A-255ENST00000637966 CADPS2Q86UW7 1296 aa16.54■□□□□ 0.24
CACNA1A-255ENST00000637966 ORAI2Q96SN7 254 aa16.54■□□□□ 0.24
CACNA1A-255ENST00000637966 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
CACNA1A-255ENST00000637966 MSH6P52701 1360 aa16.54■□□□□ 0.24
CACNA1A-255ENST00000637966 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
CACNA1A-255ENST00000637966 COG3Q96JB2 828 aa16.54■□□□□ 0.24
CACNA1A-255ENST00000637966 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
CACNA1A-255ENST00000637966 MST1RQ04912 1400 aa16.52■□□□□ 0.23
CACNA1A-255ENST00000637966 PSME1Q06323 249 aa16.51■□□□□ 0.23
CACNA1A-255ENST00000637966 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
CACNA1A-255ENST00000637966 FOXO3O43524 673 aa16.49■□□□□ 0.23
CACNA1A-255ENST00000637966 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
CACNA1A-255ENST00000637966 FBLN1P23142 703 aa16.48■□□□□ 0.23
CACNA1A-255ENST00000637966 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
CACNA1A-255ENST00000637966 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-255ENST00000637966 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
CACNA1A-255ENST00000637966 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
CACNA1A-255ENST00000637966 USP31Q70CQ4 1352 aa16.48■□□□□ 0.23
CACNA1A-255ENST00000637966 OVOS2A0A0J9YW53 1432 aa16.48■□□□□ 0.23
CACNA1A-255ENST00000637966 OVOS2Q6IE36 1432 aa16.48■□□□□ 0.23
CACNA1A-255ENST00000637966 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
CACNA1A-255ENST00000637966 INSRP06213 1382 aa16.47■□□□□ 0.23
CACNA1A-255ENST00000637966 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-255ENST00000637966 ABTB2Q8N961 1025 aa16.46■□□□□ 0.23
CACNA1A-255ENST00000637966 NLRP6P59044 892 aa16.46■□□□□ 0.22
CACNA1A-255ENST00000637966 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
CACNA1A-255ENST00000637966 PIK3C2AO00443 1686 aa16.45■□□□□ 0.22
CACNA1A-255ENST00000637966 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
CACNA1A-255ENST00000637966 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
CACNA1A-255ENST00000637966 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-255ENST00000637966 PNPLA6Q8IY17 1366 aa16.44■□□□□ 0.22
CACNA1A-255ENST00000637966 PPM1GO15355 546 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-255ENST00000637966 XPCQ01831 940 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-255ENST00000637966 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
CACNA1A-255ENST00000637966 EMILIN1Q9Y6C2 1016 aa16.43■□□□□ 0.22
CACNA1A-255ENST00000637966 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-255ENST00000637966 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
CACNA1A-255ENST00000637966 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-255ENST00000637966 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-255ENST00000637966 LTBP4Q8N2S1 1624 aa16.41■□□□□ 0.22
CACNA1A-255ENST00000637966 USP54Q70EL1 1684 aa16.41■□□□□ 0.22
CACNA1A-255ENST00000637966 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-255ENST00000637966 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-255ENST00000637966 BRINP3Q76B58 766 aa16.4■□□□□ 0.22
CACNA1A-255ENST00000637966 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
CACNA1A-255ENST00000637966 NPHP3Q7Z494 1330 aa16.4■□□□□ 0.22
CACNA1A-255ENST00000637966 TRPM3Q9HCF6 1732 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-255ENST00000637966 MARF1Q9Y4F3 1742 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-255ENST00000637966 DDX17Q92841 729 aaKnown RBP16.39■□□□□ 0.22
CACNA1A-255ENST00000637966 SOX12O15370 315 aa16.39■□□□□ 0.21
CACNA1A-255ENST00000637966 CDK12Q9NYV4 1490 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-255ENST00000637966 SENP3-EIF4A1A0A087X0R7 540 aa16.38■□□□□ 0.21
CACNA1A-255ENST00000637966 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-255ENST00000637966 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNA1A-255ENST00000637966 LMOD2Q6P5Q4 547 aa16.37■□□□□ 0.21
CACNA1A-255ENST00000637966 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
CACNA1A-255ENST00000637966 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-255ENST00000637966 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
CACNA1A-255ENST00000637966 MAP3K19Q56UN5 1328 aa16.36■□□□□ 0.21
CACNA1A-255ENST00000637966 IL13P35225 146 aa16.35■□□□□ 0.21
CACNA1A-255ENST00000637966 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-255ENST00000637966 PXDNQ92626 1479 aa16.34■□□□□ 0.21
CACNA1A-255ENST00000637966 KCNH5Q8NCM2 988 aa16.34■□□□□ 0.21
CACNA1A-255ENST00000637966 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
CACNA1A-255ENST00000637966 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
CACNA1A-255ENST00000637966 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.21
CACNA1A-255ENST00000637966 PEAK1Q9H792 1746 aa16.33■□□□□ 0.2
CACNA1A-255ENST00000637966 AMPHP49418 695 aa16.33■□□□□ 0.2
CACNA1A-255ENST00000637966 APAF1O14727 1248 aa16.32■□□□□ 0.2
CACNA1A-255ENST00000637966 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
CACNA1A-255ENST00000637966 USP19O94966 1318 aa16.32■□□□□ 0.2
CACNA1A-255ENST00000637966 GCP02774 474 aa16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 SOS2Q07890 1332 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 SPATA31A3Q5VYP0 1347 aa16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 FLT4P35916 1363 aa16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 KIF24Q5T7B8 1368 aa16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 FCHSD2O94868 740 aa16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 EIF4A2Q14240 407 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 FKBP8Q14318 412 aa16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 TNS3Q68CZ2 1445 aa16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 SLIT3O75094 1523 aa16.31■□□□□ 0.2
CACNA1A-255ENST00000637966 NFAT5O94916 1531 aa16.3■□□□□ 0.2
CACNA1A-255ENST00000637966 PNNQ9H307 717 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-255ENST00000637966 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
CACNA1A-255ENST00000637966 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
CACNA1A-255ENST00000637966 HOXC9P31274 260 aa16.29■□□□□ 0.2
CACNA1A-255ENST00000637966 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
CACNA1A-255ENST00000637966 ARHGEF10O15013 1369 aa16.28■□□□□ 0.2
CACNA1A-255ENST00000637966 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms