RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
CACNA1A-248ENST00000637774 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
CACNA1A-248ENST00000637774 NLRP6P59044 892 aa12.44□□□□□ -0.42
CACNA1A-248ENST00000637774 ZFYVE9O95405 1425 aa12.44□□□□□ -0.42
CACNA1A-248ENST00000637774 QRICH2Q9H0J4 1663 aa12.44□□□□□ -0.42
CACNA1A-248ENST00000637774 ITPRIPQ8IWB1 547 aa12.44□□□□□ -0.42
CACNA1A-248ENST00000637774 PPLO60437 1756 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 ZNF521Q96K83 1311 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 ZMYM4Q5VZL5 1548 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 DAXXQ9UER7 740 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 ALKQ9UM73 1620 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 PREX1Q8TCU6 1659 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 KCNA6P17658 529 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
CACNA1A-248ENST00000637774 NSD2O96028 1365 aa12.42□□□□□ -0.42
CACNA1A-248ENST00000637774 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-248ENST00000637774 NKTRP30414 1462 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-248ENST00000637774 ROBO2Q9HCK4 1378 aa12.42□□□□□ -0.42
CACNA1A-248ENST00000637774 PDE4AP27815 886 aa12.42□□□□□ -0.42
CACNA1A-248ENST00000637774 RARSP54136 660 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-248ENST00000637774 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
CACNA1A-248ENST00000637774 KIAA1210Q9ULL0 1709 aa12.41□□□□□ -0.42
CACNA1A-248ENST00000637774 NINLQ9Y2I6 1382 aa12.41□□□□□ -0.42
CACNA1A-248ENST00000637774 PRR36Q9H6K5 1346 aa12.41□□□□□ -0.42
CACNA1A-248ENST00000637774 FAM83GA6ND36 823 aa12.41□□□□□ -0.42
CACNA1A-248ENST00000637774 NBR1Q14596 966 aa12.41□□□□□ -0.42
CACNA1A-248ENST00000637774 PTPRMP28827 1452 aa12.41□□□□□ -0.42
CACNA1A-248ENST00000637774 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
CACNA1A-248ENST00000637774 ANKLE2Q86XL3 938 aa12.4□□□□□ -0.42
CACNA1A-248ENST00000637774 MYO5BQ9ULV0 1848 aa12.4□□□□□ -0.42
CACNA1A-248ENST00000637774 TMEM131LA2VDJ0 1609 aa12.4□□□□□ -0.42
CACNA1A-248ENST00000637774 AEBP1Q8IUX7 1158 aa12.4□□□□□ -0.42
CACNA1A-248ENST00000637774 ABTB2Q8N961 1025 aa12.4□□□□□ -0.42
CACNA1A-248ENST00000637774 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-248ENST00000637774 FANCIQ9NVI1 1328 aa12.4□□□□□ -0.43
CACNA1A-248ENST00000637774 FCHSD2O94868 740 aa12.39□□□□□ -0.43
CACNA1A-248ENST00000637774 ESCO1Q5FWF5 840 aa12.39□□□□□ -0.43
CACNA1A-248ENST00000637774 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
CACNA1A-248ENST00000637774 CENPQQ7L2Z9 268 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-248ENST00000637774 NEURL4Q96JN8 1562 aa12.38□□□□□ -0.43
CACNA1A-248ENST00000637774 TTC21BQ7Z4L5 1316 aa12.38□□□□□ -0.43
CACNA1A-248ENST00000637774 MSH5O43196 834 aa12.38□□□□□ -0.43
CACNA1A-248ENST00000637774 RLBP1P12271 317 aa12.38□□□□□ -0.43
CACNA1A-248ENST00000637774 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
CACNA1A-248ENST00000637774 AGLP35573 1532 aa12.37□□□□□ -0.43
CACNA1A-248ENST00000637774 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-248ENST00000637774 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
CACNA1A-248ENST00000637774 MYOM1P52179 1685 aa12.37□□□□□ -0.43
CACNA1A-248ENST00000637774 PSME1Q06323 249 aa12.37□□□□□ -0.43
CACNA1A-248ENST00000637774 NOB1Q9ULX3 412 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-248ENST00000637774 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-248ENST00000637774 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
CACNA1A-248ENST00000637774 MCM10Q7L590 875 aa12.36□□□□□ -0.43
CACNA1A-248ENST00000637774 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-248ENST00000637774 ZC3H13Q5T200 1668 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-248ENST00000637774 IFT172Q9UG01 1749 aa12.36□□□□□ -0.43
CACNA1A-248ENST00000637774 NFE2L2Q16236 605 aa12.35□□□□□ -0.43
CACNA1A-248ENST00000637774 INSRP06213 1382 aa12.35□□□□□ -0.43
CACNA1A-248ENST00000637774 IGHDP01880 384 aa12.35□□□□□ -0.43
CACNA1A-248ENST00000637774 TBX22Q9Y458 520 aa12.35□□□□□ -0.43
CACNA1A-248ENST00000637774 ARHGEF40Q8TER5 1519 aa12.35□□□□□ -0.43
CACNA1A-248ENST00000637774 PDE3AQ14432 1141 aa12.35□□□□□ -0.43
CACNA1A-248ENST00000637774 NECTIN2Q92692 538 aa12.35□□□□□ -0.43
CACNA1A-248ENST00000637774 FOXO3O43524 673 aa12.34□□□□□ -0.43
CACNA1A-248ENST00000637774 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
CACNA1A-248ENST00000637774 RSPH6AQ9H0K4 717 aa12.34□□□□□ -0.43
CACNA1A-248ENST00000637774 EIF4A2Q14240 407 aaKnown RBP12.33□□□□□ -0.43
CACNA1A-248ENST00000637774 IPO8O15397 1037 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-248ENST00000637774 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-248ENST00000637774 IL13P35225 146 aa12.33□□□□□ -0.44
CACNA1A-248ENST00000637774 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
CACNA1A-248ENST00000637774 ARHGEF28Q8N1W1 1705 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-248ENST00000637774 SLC4A3P48751 1232 aa12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 CALD1Q05682 793 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 CCDC27Q2M243 656 aa12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 PROSER2Q86WR7 435 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 TSPYL6Q8N831 410 aa12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 APBB1O00213 710 aa12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 TRIM27P14373 513 aa12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 GNAI1P63096 354 aa12.32□□□□□ -0.44
CACNA1A-248ENST00000637774 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-248ENST00000637774 SPATA31D1Q6ZQQ2 1576 aa12.31□□□□□ -0.44
CACNA1A-248ENST00000637774 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
CACNA1A-248ENST00000637774 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
CACNA1A-248ENST00000637774 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-248ENST00000637774 MS4A1P11836 297 aa12.31□□□□□ -0.44
CACNA1A-248ENST00000637774 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
CACNA1A-248ENST00000637774 PCDHB15Q9Y5E8 787 aa12.31□□□□□ -0.44
CACNA1A-248ENST00000637774 ATF7IPQ6VMQ6 1270 aa12.3□□□□□ -0.44
CACNA1A-248ENST00000637774 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
CACNA1A-248ENST00000637774 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
CACNA1A-248ENST00000637774 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
CACNA1A-248ENST00000637774 MAP3K19Q56UN5 1328 aa12.3□□□□□ -0.44
CACNA1A-248ENST00000637774 SLC4A10Q6U841 1118 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms