RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 PLEKHG3A1L390 1219 aa18.92■□□□□ 0.62
SYNGAP1-224ENST00000637721 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
SYNGAP1-224ENST00000637721 PAK3O75914 559 aaPredicted RBP18.92■□□□□ 0.62
SYNGAP1-224ENST00000637721 ONECUT3O60422 494 aaPredicted RBP18.91■□□□□ 0.62
SYNGAP1-224ENST00000637721 L3MBTL2Q969R5 705 aa18.91■□□□□ 0.62
SYNGAP1-224ENST00000637721 NRAPQ86VF7 1730 aa18.91■□□□□ 0.62
SYNGAP1-224ENST00000637721 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
SYNGAP1-224ENST00000637721 CCDC9Q9Y3X0 531 aaKnown RBP18.89■□□□□ 0.61
SYNGAP1-224ENST00000637721 ACEP12821 1306 aa18.89■□□□□ 0.61
SYNGAP1-224ENST00000637721 NBPF8Q3BBV2 869 aa18.88■□□□□ 0.61
SYNGAP1-224ENST00000637721 BTG4Q9NY30 223 aa18.88■□□□□ 0.61
SYNGAP1-224ENST00000637721 BRD4O60885 1362 aaPredicted RBP18.88■□□□□ 0.61
SYNGAP1-224ENST00000637721 QRICH2Q9H0J4 1663 aa18.88■□□□□ 0.61
SYNGAP1-224ENST00000637721 BRWD3Q6RI45 1802 aa18.87■□□□□ 0.61
SYNGAP1-224ENST00000637721 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
SYNGAP1-224ENST00000637721 SEPT12Q8IYM1 358 aa18.87■□□□□ 0.61
SYNGAP1-224ENST00000637721 SRPK2P78362 688 aaKnown RBP18.86■□□□□ 0.61
SYNGAP1-224ENST00000637721 PHRF1Q9P1Y6 1649 aaKnown RBP18.85■□□□□ 0.61
SYNGAP1-224ENST00000637721 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
SYNGAP1-224ENST00000637721 SIN3AQ96ST3 1273 aa18.85■□□□□ 0.61
SYNGAP1-224ENST00000637721 PRDM11Q9NQV5 511 aa18.85■□□□□ 0.61
SYNGAP1-224ENST00000637721 BLMP54132 1417 aaPredicted RBP18.84■□□□□ 0.61
SYNGAP1-224ENST00000637721 PPIP5K1Q6PFW1 1433 aa18.84■□□□□ 0.61
SYNGAP1-224ENST00000637721 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
SYNGAP1-224ENST00000637721 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
SYNGAP1-224ENST00000637721 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
SYNGAP1-224ENST00000637721 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
SYNGAP1-224ENST00000637721 ABTB2Q8N961 1025 aa18.82■□□□□ 0.6
SYNGAP1-224ENST00000637721 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
SYNGAP1-224ENST00000637721 SPATA31A5Q5VU36 1347 aa18.81■□□□□ 0.6
SYNGAP1-224ENST00000637721 EVC2Q86UK5 1308 aa18.81■□□□□ 0.6
SYNGAP1-224ENST00000637721 SPATA31A7Q8IWB4 1347 aa18.81■□□□□ 0.6
SYNGAP1-224ENST00000637721 CABP2Q9NPB3 220 aa18.81■□□□□ 0.6
SYNGAP1-224ENST00000637721 SF3B2Q13435 895 aaKnown RBP18.8■□□□□ 0.6
SYNGAP1-224ENST00000637721 FAM98CQ17RN3 349 aaKnown RBP18.79■□□□□ 0.6
SYNGAP1-224ENST00000637721 NLRP13Q86W25 1043 aa18.79■□□□□ 0.6
SYNGAP1-224ENST00000637721 ZRANB1Q9UGI0 708 aa18.79■□□□□ 0.6
SYNGAP1-224ENST00000637721 CPDO75976 1380 aa18.79■□□□□ 0.6
SYNGAP1-224ENST00000637721 USP19O94966 1318 aa18.78■□□□□ 0.6
SYNGAP1-224ENST00000637721 NRKQ7Z2Y5 1582 aa18.78■□□□□ 0.6
SYNGAP1-224ENST00000637721 A0A0G2JS52 829 aa18.78■□□□□ 0.6
SYNGAP1-224ENST00000637721 MYT1Q01538 1121 aa18.78■□□□□ 0.6
SYNGAP1-224ENST00000637721 CABP1Q9NZU7 370 aa18.77■□□□□ 0.6
SYNGAP1-224ENST00000637721 USP6P35125 1406 aa18.76■□□□□ 0.59
SYNGAP1-224ENST00000637721 ZC3H6P61129 1189 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-224ENST00000637721 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
SYNGAP1-224ENST00000637721 THSD7AQ9UPZ6 1657 aa18.76■□□□□ 0.59
SYNGAP1-224ENST00000637721 SPATA31A1Q5TZJ5 1347 aa18.75■□□□□ 0.59
SYNGAP1-224ENST00000637721 ZNF692Q9BU19 519 aaPredicted RBP18.75■□□□□ 0.59
SYNGAP1-224ENST00000637721 SBNO2Q9Y2G9 1366 aa18.74■□□□□ 0.59
SYNGAP1-224ENST00000637721 CHRNA2Q15822 529 aa18.74■□□□□ 0.59
SYNGAP1-224ENST00000637721 GCP02774 474 aa18.73■□□□□ 0.59
SYNGAP1-224ENST00000637721 EVA1CP58658 441 aa18.73■□□□□ 0.59
SYNGAP1-224ENST00000637721 LMO7Q8WWI1 1683 aa18.73■□□□□ 0.59
SYNGAP1-224ENST00000637721 TONSLQ96HA7 1378 aa18.72■□□□□ 0.59
SYNGAP1-224ENST00000637721 STRN4Q9NRL3 753 aa18.72■□□□□ 0.59
SYNGAP1-224ENST00000637721 SSH2Q76I76 1423 aa18.72■□□□□ 0.59
SYNGAP1-224ENST00000637721 BARGINQ6ZT62 677 aa18.71■□□□□ 0.59
SYNGAP1-224ENST00000637721 RGPD1P0DJD0 1748 aa18.71■□□□□ 0.59
SYNGAP1-224ENST00000637721 AKAP12Q02952 1782 aa18.7■□□□□ 0.58
SYNGAP1-224ENST00000637721 SLIT3O75094 1523 aa18.7■□□□□ 0.58
SYNGAP1-224ENST00000637721 BAG6P46379 1132 aa18.7■□□□□ 0.58
SYNGAP1-224ENST00000637721 NLRP6P59044 892 aa18.7■□□□□ 0.58
SYNGAP1-224ENST00000637721 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
SYNGAP1-224ENST00000637721 CAMTA1Q9Y6Y1 1673 aa18.69■□□□□ 0.58
SYNGAP1-224ENST00000637721 CARD11Q9BXL7 1154 aa18.69■□□□□ 0.58
SYNGAP1-224ENST00000637721 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
SYNGAP1-224ENST00000637721 TTC21AQ8NDW8 1320 aa18.68■□□□□ 0.58
SYNGAP1-224ENST00000637721 PIK3C2AO00443 1686 aa18.67■□□□□ 0.58
SYNGAP1-224ENST00000637721 AATKQ6ZMQ8 1374 aa18.67■□□□□ 0.58
SYNGAP1-224ENST00000637721 COL5A2P05997 1499 aaPredicted RBP18.66■□□□□ 0.58
SYNGAP1-224ENST00000637721 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
SYNGAP1-224ENST00000637721 TCP11L2Q8N4U5 519 aa18.66■□□□□ 0.58
SYNGAP1-224ENST00000637721 KCNH5Q8NCM2 988 aa18.66■□□□□ 0.58
SYNGAP1-224ENST00000637721 TTC21BQ7Z4L5 1316 aa18.66■□□□□ 0.58
SYNGAP1-224ENST00000637721 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
SYNGAP1-224ENST00000637721 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
SYNGAP1-224ENST00000637721 LARP1Q6PKG0 1096 aaKnown RBP18.65■□□□□ 0.58
SYNGAP1-224ENST00000637721 SLC24A1O60721 1099 aa18.64■□□□□ 0.57
SYNGAP1-224ENST00000637721 PUS7Q96PZ0 661 aaKnown RBP18.64■□□□□ 0.57
SYNGAP1-224ENST00000637721 CRB1P82279 1406 aa18.64■□□□□ 0.57
SYNGAP1-224ENST00000637721 C11orf95C9JLR9 678 aaPredicted RBP18.63■□□□□ 0.57
SYNGAP1-224ENST00000637721 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
SYNGAP1-224ENST00000637721 USP35Q9P2H5 1018 aa18.63■□□□□ 0.57
SYNGAP1-224ENST00000637721 KTN1Q86UP2 1357 aaKnown RBP18.63■□□□□ 0.57
SYNGAP1-224ENST00000637721 MON2Q7Z3U7 1717 aa18.63■□□□□ 0.57
SYNGAP1-224ENST00000637721 PARP4Q9UKK3 1724 aaKnown RBP18.62■□□□□ 0.57
SYNGAP1-224ENST00000637721 TNS1Q9HBL0 1735 aaKnown RBP18.61■□□□□ 0.57
SYNGAP1-224ENST00000637721 COL18A1P39060 1754 aa18.6■□□□□ 0.57
SYNGAP1-224ENST00000637721 ABCC6O95255 1503 aa18.6■□□□□ 0.57
SYNGAP1-224ENST00000637721 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
SYNGAP1-224ENST00000637721 FAM182BQ5T319 152 aa18.59■□□□□ 0.57
SYNGAP1-224ENST00000637721 ARHGEF25Q86VW2 580 aa18.59■□□□□ 0.57
SYNGAP1-224ENST00000637721 USP54Q70EL1 1684 aa18.59■□□□□ 0.57
SYNGAP1-224ENST00000637721 USP31Q70CQ4 1352 aa18.58■□□□□ 0.57
SYNGAP1-224ENST00000637721 ZBTB7CA1YPR0 619 aa18.58■□□□□ 0.56
SYNGAP1-224ENST00000637721 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.56
SYNGAP1-224ENST00000637721 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
SYNGAP1-224ENST00000637721 WDR17Q8IZU2 1322 aa18.57■□□□□ 0.56
SYNGAP1-224ENST00000637721 EN1Q05925 392 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms