RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 FBXO31Q5XUX0 539 aaPredicted RBP24.89■■□□□ 1.57
CACNA1A-241ENST00000637475 MYH16Q9H6N6 1097 aa24.89■■□□□ 1.57
CACNA1A-241ENST00000637475 CEP170BQ9Y4F5 1589 aaPredicted RBP24.89■■□□□ 1.57
CACNA1A-241ENST00000637475 ADGRF5Q8IZF2 1346 aa24.89■■□□□ 1.57
CACNA1A-241ENST00000637475 CHMP5Q9NZZ3 219 aa24.87■■□□□ 1.57
CACNA1A-241ENST00000637475 UGGT1Q9NYU2 1555 aa24.87■■□□□ 1.57
CACNA1A-241ENST00000637475 HDAC1Q13547 482 aaPredicted RBP24.87■■□□□ 1.57
CACNA1A-241ENST00000637475 MORC1Q86VD1 984 aa24.87■■□□□ 1.57
CACNA1A-241ENST00000637475 RRAGDQ9NQL2 400 aaPredicted RBP24.87■■□□□ 1.57
CACNA1A-241ENST00000637475 NCKAP5LQ9HCH0 1330 aa24.85■■□□□ 1.57
CACNA1A-241ENST00000637475 GOLGA6L3A6NEY3 463 aa24.85■■□□□ 1.57
CACNA1A-241ENST00000637475 CFAP53Q96M91 514 aa24.83■■□□□ 1.57
CACNA1A-241ENST00000637475 XRCC6P12956 609 aaKnown RBP eCLIP24.82■■□□□ 1.56
CACNA1A-241ENST00000637475 ZKSCAN2Q63HK3 967 aa24.82■■□□□ 1.56
CACNA1A-241ENST00000637475 TNRQ92752 1358 aa24.81■■□□□ 1.56
CACNA1A-241ENST00000637475 CLCN1P35523 988 aa24.8■■□□□ 1.56
CACNA1A-241ENST00000637475 A2ML1A8K2U0 1454 aa24.8■■□□□ 1.56
CACNA1A-241ENST00000637475 C22orf23Q9BZE7 217 aa24.8■■□□□ 1.56
CACNA1A-241ENST00000637475 ABCC3O15438 1527 aa24.79■■□□□ 1.56
CACNA1A-241ENST00000637475 DDIT3P35638 169 aa24.79■■□□□ 1.56
CACNA1A-241ENST00000637475 SMC5Q8IY18 1101 aa24.78■■□□□ 1.56
CACNA1A-241ENST00000637475 DZIP1LQ8IYY4 767 aaKnown RBP24.78■■□□□ 1.56
CACNA1A-241ENST00000637475 ZNF692Q9BU19 519 aaPredicted RBP24.78■■□□□ 1.56
CACNA1A-241ENST00000637475 TNNQ9UQP3 1299 aa24.78■■□□□ 1.56
CACNA1A-241ENST00000637475 DDX11L8A8MPP1 907 aa24.78■■□□□ 1.56
CACNA1A-241ENST00000637475 MRE11P49959 708 aa24.78■■□□□ 1.56
CACNA1A-241ENST00000637475 NOS1P29475 1434 aa24.77■■□□□ 1.56
CACNA1A-241ENST00000637475 IL16Q14005 1332 aa24.77■■□□□ 1.56
CACNA1A-241ENST00000637475 ANKRD36BQ8N2N9 1353 aa24.76■■□□□ 1.56
CACNA1A-241ENST00000637475 ABCC11Q96J66 1382 aa24.76■■□□□ 1.56
CACNA1A-241ENST00000637475 EIF5BO60841 1220 aaKnown RBP24.76■■□□□ 1.55
CACNA1A-241ENST00000637475 SNX21Q969T3 373 aa24.76■■□□□ 1.55
CACNA1A-241ENST00000637475 C14orf93Q9H972 538 aaKnown RBP24.76■■□□□ 1.55
CACNA1A-241ENST00000637475 CIZ1Q9ULV3 898 aaPredicted RBP24.75■■□□□ 1.55
CACNA1A-241ENST00000637475 RBM25P49756 843 aaKnown RBP24.74■■□□□ 1.55
CACNA1A-241ENST00000637475 DDX19BQ9UMR2 479 aa24.74■■□□□ 1.55
CACNA1A-241ENST00000637475 ARHGEF28Q8N1W1 1705 aaKnown RBP24.74■■□□□ 1.55
CACNA1A-241ENST00000637475 MTHFSP49914 203 aa24.74■■□□□ 1.55
CACNA1A-241ENST00000637475 RRP7AQ9Y3A4 280 aaKnown RBP24.74■■□□□ 1.55
CACNA1A-241ENST00000637475 RPGRIP1LQ68CZ1 1315 aa24.74■■□□□ 1.55
CACNA1A-241ENST00000637475 LTBP4Q8N2S1 1624 aa24.73■■□□□ 1.55
CACNA1A-241ENST00000637475 COL3A1P02461 1466 aaPredicted RBP24.73■■□□□ 1.55
CACNA1A-241ENST00000637475 TRAK2O60296 914 aa24.73■■□□□ 1.55
CACNA1A-241ENST00000637475 ANKRD26Q9UPS8 1709 aa24.73■■□□□ 1.55
CACNA1A-241ENST00000637475 TULP4Q9NRJ4 1543 aa24.72■■□□□ 1.55
CACNA1A-241ENST00000637475 MED14O60244 1454 aa24.72■■□□□ 1.55
CACNA1A-241ENST00000637475 PTMSP20962 102 aa24.71■■□□□ 1.55
CACNA1A-241ENST00000637475 FTSJ3Q8IY81 847 aaKnown RBP24.7■■□□□ 1.54
CACNA1A-241ENST00000637475 SLC12A5Q9H2X9 1139 aa24.7■■□□□ 1.54
CACNA1A-241ENST00000637475 HSCBQ8IWL3 235 aa24.69■■□□□ 1.54
CACNA1A-241ENST00000637475 ZNF335Q9H4Z2 1342 aaPredicted RBP24.69■■□□□ 1.54
CACNA1A-241ENST00000637475 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
CACNA1A-241ENST00000637475 BCL2L13Q9BXK5 485 aa24.67■■□□□ 1.54
CACNA1A-241ENST00000637475 PIK3C2BO00750 1634 aa24.67■■□□□ 1.54
CACNA1A-241ENST00000637475 SPATA31D1Q6ZQQ2 1576 aa24.67■■□□□ 1.54
CACNA1A-241ENST00000637475 TRIM27P14373 513 aa24.66■■□□□ 1.54
CACNA1A-241ENST00000637475 ATF7IPQ6VMQ6 1270 aa24.66■■□□□ 1.54
CACNA1A-241ENST00000637475 PLEKHF1Q96S99 279 aa24.66■■□□□ 1.54
CACNA1A-241ENST00000637475 CFAP65Q6ZU64 1925 aaKnown RBP24.66■■□□□ 1.54
CACNA1A-241ENST00000637475 CDC42BPGQ6DT37 1551 aa24.66■■□□□ 1.54
CACNA1A-241ENST00000637475 KIF16BQ96L93 1317 aa24.65■■□□□ 1.54
CACNA1A-241ENST00000637475 PNNQ9H307 717 aaKnown RBP24.65■■□□□ 1.54
CACNA1A-241ENST00000637475 ZBTB40Q9NUA8 1239 aa24.64■■□□□ 1.54
CACNA1A-241ENST00000637475 MFAP1P55081 439 aaKnown RBP24.63■■□□□ 1.53
CACNA1A-241ENST00000637475 BRPF1P55201 1214 aaPredicted RBP24.63■■□□□ 1.53
CACNA1A-241ENST00000637475 GRPEL1Q9HAV7 217 aa24.63■■□□□ 1.53
CACNA1A-241ENST00000637475 ARHGAP31Q2M1Z3 1444 aa24.63■■□□□ 1.53
CACNA1A-241ENST00000637475 THEMISQ8N1K5 641 aaPredicted RBP24.63■■□□□ 1.53
CACNA1A-241ENST00000637475 SMC4Q9NTJ3 1288 aa24.63■■□□□ 1.53
CACNA1A-241ENST00000637475 EVC2Q86UK5 1308 aa24.62■■□□□ 1.53
CACNA1A-241ENST00000637475 NUCB1Q02818 461 aa24.62■■□□□ 1.53
CACNA1A-241ENST00000637475 SKOR2Q2VWA4 1001 aaPredicted RBP24.62■■□□□ 1.53
CACNA1A-241ENST00000637475 PANK2Q9BZ23 570 aa24.62■■□□□ 1.53
CACNA1A-241ENST00000637475 PPIP5K1Q6PFW1 1433 aa24.62■■□□□ 1.53
CACNA1A-241ENST00000637475 SSH1Q8WYL5 1049 aa24.61■■□□□ 1.53
CACNA1A-241ENST00000637475 U2AF1L5P0DN76 240 aaPredicted RBP24.6■■□□□ 1.53
CACNA1A-241ENST00000637475 U2AF1Q01081 240 aaKnown RBP eCLIP24.6■■□□□ 1.53
CACNA1A-241ENST00000637475 ALDH1L2Q3SY69 923 aa24.6■■□□□ 1.53
CACNA1A-241ENST00000637475 ZNF428Q96B54 188 aa24.6■■□□□ 1.53
CACNA1A-241ENST00000637475 TMPOP42166 694 aaKnown RBP24.6■■□□□ 1.53
CACNA1A-241ENST00000637475 ANKLE2Q86XL3 938 aa24.6■■□□□ 1.53
CACNA1A-241ENST00000637475 TRIM35Q9UPQ4 493 aa24.6■■□□□ 1.53
CACNA1A-241ENST00000637475 TRAK1Q9UPV9 953 aa24.6■■□□□ 1.53
CACNA1A-241ENST00000637475 EXOSC9Q06265 439 aaKnown RBP24.59■■□□□ 1.53
CACNA1A-241ENST00000637475 IPO8O15397 1037 aaKnown RBP24.58■■□□□ 1.53
CACNA1A-241ENST00000637475 RAB3GAP1Q15042 981 aa24.58■■□□□ 1.53
CACNA1A-241ENST00000637475 BMP2KLQ5H9B9 411 aa24.58■■□□□ 1.53
CACNA1A-241ENST00000637475 CLEC17AQ6ZS10 378 aa24.58■■□□□ 1.52
CACNA1A-241ENST00000637475 NEXMIFQ5QGS0 1516 aa24.57■■□□□ 1.52
CACNA1A-241ENST00000637475 PIK3R4Q99570 1358 aa24.57■■□□□ 1.52
CACNA1A-241ENST00000637475 TNNT2P45379 298 aaPredicted RBP24.57■■□□□ 1.52
CACNA1A-241ENST00000637475 GBP4Q96PP9 640 aa24.57■■□□□ 1.52
CACNA1A-241ENST00000637475 IBTKQ9P2D0 1353 aaPredicted RBP24.57■■□□□ 1.52
CACNA1A-241ENST00000637475 ZFYVE9O95405 1425 aa24.55■■□□□ 1.52
CACNA1A-241ENST00000637475 ITPRIPQ8IWB1 547 aa24.55■■□□□ 1.52
CACNA1A-241ENST00000637475 PNPLA6Q8IY17 1366 aa24.55■■□□□ 1.52
CACNA1A-241ENST00000637475 ESPNB1AK53 854 aa24.54■■□□□ 1.52
CACNA1A-241ENST00000637475 RRP9O43818 475 aaKnown RBP24.54■■□□□ 1.52
CACNA1A-241ENST00000637475 TSR2Q969E8 191 aaKnown RBP24.54■■□□□ 1.52
CACNA1A-241ENST00000637475 CHMP4BQ9H444 224 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms