RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 L3MBTL2Q969R5 705 aa18.43■□□□□ 0.54
CTSD-210ENST00000637381 BRWD3Q6RI45 1802 aa18.43■□□□□ 0.54
CTSD-210ENST00000637381 PLEKHG3A1L390 1219 aa18.42■□□□□ 0.54
CTSD-210ENST00000637381 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
CTSD-210ENST00000637381 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
CTSD-210ENST00000637381 TRPM1Q7Z4N2 1603 aa18.39■□□□□ 0.53
CTSD-210ENST00000637381 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
CTSD-210ENST00000637381 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
CTSD-210ENST00000637381 SIN3AQ96ST3 1273 aa18.38■□□□□ 0.53
CTSD-210ENST00000637381 ACEP12821 1306 aa18.38■□□□□ 0.53
CTSD-210ENST00000637381 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
CTSD-210ENST00000637381 QRICH2Q9H0J4 1663 aa18.38■□□□□ 0.53
CTSD-210ENST00000637381 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
CTSD-210ENST00000637381 BTG4Q9NY30 223 aa18.37■□□□□ 0.53
CTSD-210ENST00000637381 PHRF1Q9P1Y6 1649 aaKnown RBP18.37■□□□□ 0.53
CTSD-210ENST00000637381 SEPT12Q8IYM1 358 aa18.36■□□□□ 0.53
CTSD-210ENST00000637381 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
CTSD-210ENST00000637381 BRD4O60885 1362 aaPredicted RBP18.32■□□□□ 0.52
CTSD-210ENST00000637381 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
CTSD-210ENST00000637381 BLMP54132 1417 aaPredicted RBP18.32■□□□□ 0.52
CTSD-210ENST00000637381 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
CTSD-210ENST00000637381 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
CTSD-210ENST00000637381 SRPK2P78362 688 aaKnown RBP18.31■□□□□ 0.52
CTSD-210ENST00000637381 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
CTSD-210ENST00000637381 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
CTSD-210ENST00000637381 NEUROD1Q13562 356 aa18.3■□□□□ 0.52
CTSD-210ENST00000637381 KRT27Q7Z3Y8 459 aa18.3■□□□□ 0.52
CTSD-210ENST00000637381 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
CTSD-210ENST00000637381 USP19O94966 1318 aa18.29■□□□□ 0.52
CTSD-210ENST00000637381 NRKQ7Z2Y5 1582 aa18.29■□□□□ 0.52
CTSD-210ENST00000637381 THSD7AQ9UPZ6 1657 aa18.28■□□□□ 0.52
CTSD-210ENST00000637381 ABTB2Q8N961 1025 aa18.28■□□□□ 0.52
CTSD-210ENST00000637381 CPDO75976 1380 aa18.28■□□□□ 0.52
CTSD-210ENST00000637381 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
CTSD-210ENST00000637381 NUTM2GQ5VZR2 741 aa18.27■□□□□ 0.52
CTSD-210ENST00000637381 CABP1Q9NZU7 370 aa18.27■□□□□ 0.52
CTSD-210ENST00000637381 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
CTSD-210ENST00000637381 SSH2Q76I76 1423 aa18.26■□□□□ 0.51
CTSD-210ENST00000637381 LMO7Q8WWI1 1683 aa18.26■□□□□ 0.51
CTSD-210ENST00000637381 ZC3H6P61129 1189 aaKnown RBP18.26■□□□□ 0.51
CTSD-210ENST00000637381 ROCK2O75116 1388 aaKnown RBP18.26■□□□□ 0.51
CTSD-210ENST00000637381 SPATA31A1Q5TZJ5 1347 aa18.25■□□□□ 0.51
CTSD-210ENST00000637381 USP6P35125 1406 aa18.25■□□□□ 0.51
CTSD-210ENST00000637381 CHRNA2Q15822 529 aa18.25■□□□□ 0.51
CTSD-210ENST00000637381 NLRP13Q86W25 1043 aa18.25■□□□□ 0.51
CTSD-210ENST00000637381 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
CTSD-210ENST00000637381 AKAP12Q02952 1782 aa18.23■□□□□ 0.51
CTSD-210ENST00000637381 GCP02774 474 aa18.23■□□□□ 0.51
CTSD-210ENST00000637381 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
CTSD-210ENST00000637381 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
CTSD-210ENST00000637381 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
CTSD-210ENST00000637381 ZNF692Q9BU19 519 aaPredicted RBP18.21■□□□□ 0.51
CTSD-210ENST00000637381 SLIT3O75094 1523 aa18.21■□□□□ 0.51
CTSD-210ENST00000637381 PIK3C2AO00443 1686 aa18.21■□□□□ 0.51
CTSD-210ENST00000637381 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
CTSD-210ENST00000637381 DEFB132Q7Z7B7 95 aa18.2■□□□□ 0.5
CTSD-210ENST00000637381 RGPD1P0DJD0 1748 aa18.19■□□□□ 0.5
CTSD-210ENST00000637381 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
CTSD-210ENST00000637381 SF3B2Q13435 895 aaKnown RBP18.19■□□□□ 0.5
CTSD-210ENST00000637381 STRN4Q9NRL3 753 aa18.19■□□□□ 0.5
CTSD-210ENST00000637381 COL18A1P39060 1754 aa18.18■□□□□ 0.5
CTSD-210ENST00000637381 A0A0G2JS52 829 aa18.18■□□□□ 0.5
CTSD-210ENST00000637381 NLRP6P59044 892 aa18.18■□□□□ 0.5
CTSD-210ENST00000637381 MYT1Q01538 1121 aa18.18■□□□□ 0.5
CTSD-210ENST00000637381 EVA1CP58658 441 aa18.17■□□□□ 0.5
CTSD-210ENST00000637381 AATKQ6ZMQ8 1374 aa18.17■□□□□ 0.5
CTSD-210ENST00000637381 COL5A2P05997 1499 aaPredicted RBP18.16■□□□□ 0.5
CTSD-210ENST00000637381 LARP1Q6PKG0 1096 aaKnown RBP18.16■□□□□ 0.5
CTSD-210ENST00000637381 TNS1Q9HBL0 1735 aaKnown RBP18.15■□□□□ 0.5
CTSD-210ENST00000637381 THRAP3Q9Y2W1 955 aaKnown RBP18.15■□□□□ 0.5
CTSD-210ENST00000637381 TTC21BQ7Z4L5 1316 aa18.15■□□□□ 0.5
CTSD-210ENST00000637381 MON2Q7Z3U7 1717 aa18.15■□□□□ 0.5
CTSD-210ENST00000637381 DISP2A7MBM2 1401 aa18.15■□□□□ 0.5
CTSD-210ENST00000637381 BAG6P46379 1132 aa18.14■□□□□ 0.49
CTSD-210ENST00000637381 TRIM26Q12899 539 aaPredicted RBP18.14■□□□□ 0.49
CTSD-210ENST00000637381 FAM182BQ5T319 152 aa18.14■□□□□ 0.49
CTSD-210ENST00000637381 TCP11L2Q8N4U5 519 aa18.14■□□□□ 0.49
CTSD-210ENST00000637381 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.49
CTSD-210ENST00000637381 TTC21AQ8NDW8 1320 aa18.14■□□□□ 0.49
CTSD-210ENST00000637381 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
CTSD-210ENST00000637381 TONSLQ96HA7 1378 aa18.13■□□□□ 0.49
CTSD-210ENST00000637381 PARP4Q9UKK3 1724 aaKnown RBP18.12■□□□□ 0.49
CTSD-210ENST00000637381 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
CTSD-210ENST00000637381 USP35Q9P2H5 1018 aa18.12■□□□□ 0.49
CTSD-210ENST00000637381 CRB1P82279 1406 aa18.12■□□□□ 0.49
CTSD-210ENST00000637381 ARHGEF25Q86VW2 580 aa18.11■□□□□ 0.49
CTSD-210ENST00000637381 CD163L1Q9NR16 1453 aa18.11■□□□□ 0.49
CTSD-210ENST00000637381 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
CTSD-210ENST00000637381 KTN1Q86UP2 1357 aaKnown RBP18.1■□□□□ 0.49
CTSD-210ENST00000637381 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
CTSD-210ENST00000637381 RGPD5Q99666 1765 aa18.09■□□□□ 0.49
CTSD-210ENST00000637381 AXIN2Q9Y2T1 843 aa18.09■□□□□ 0.49
CTSD-210ENST00000637381 NFAT5O94916 1531 aa18.08■□□□□ 0.49
CTSD-210ENST00000637381 USP31Q70CQ4 1352 aa18.08■□□□□ 0.49
CTSD-210ENST00000637381 EN1Q05925 392 aaPredicted RBP18.08■□□□□ 0.48
CTSD-210ENST00000637381 PDE3BQ13370 1112 aa18.07■□□□□ 0.48
CTSD-210ENST00000637381 ABCC6O95255 1503 aa18.07■□□□□ 0.48
CTSD-210ENST00000637381 CAMKK2Q96RR4 588 aa18.06■□□□□ 0.48
CTSD-210ENST00000637381 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
CTSD-210ENST00000637381 WNK3Q9BYP7 1800 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms