RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 PCMTD1Q96MG8 357 aaPredicted RBP7.81□□□□□ -1.16
SCN2A-216ENST00000637367 SMARCA5O60264 1052 aaPredicted RBP7.81□□□□□ -1.16
SCN2A-216ENST00000637367 IGHDP01880 384 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 RARSP54136 660 aaKnown RBP7.81□□□□□ -1.16
SCN2A-216ENST00000637367 DCTN1Q14203 1278 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 SYNE3Q6ZMZ3 975 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 PDILTQ8N807 584 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.81□□□□□ -1.16
SCN2A-216ENST00000637367 SSFA2P28290 1259 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 MAPK8IP2Q13387 824 aaPredicted RBP7.81□□□□□ -1.16
SCN2A-216ENST00000637367 RRS1Q15050 365 aaKnown RBP7.81□□□□□ -1.16
SCN2A-216ENST00000637367 NFXL1Q6ZNB6 911 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 FERMT3Q86UX7 667 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 DNAJC2Q99543 621 aaKnown RBP7.81□□□□□ -1.16
SCN2A-216ENST00000637367 MIS18AQ9NYP9 233 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 GNAI3P08754 354 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 XPCQ01831 940 aaPredicted RBP7.8□□□□□ -1.16
SCN2A-216ENST00000637367 TRDNQ13061 729 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 DUSP27Q5VZP5 1158 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 SIL1Q9H173 461 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 C9orf84Q5VXU9 1444 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 PATL2C9JE40 543 aaKnown RBP7.8□□□□□ -1.16
SCN2A-216ENST00000637367 TPM1P09493 284 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 WDR63Q8IWG1 891 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 CNTROBQ8N137 903 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 PRDM10Q9NQV6 1147 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 DDX58O95786 925 aaKnown RBP7.8□□□□□ -1.16
SCN2A-216ENST00000637367 SKIDA1Q1XH10 827 aa7.8□□□□□ -1.16
SCN2A-216ENST00000637367 SMC2O95347 1197 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 GNAI2P04899 355 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 TMPOP42166 694 aaKnown RBP7.79□□□□□ -1.16
SCN2A-216ENST00000637367 TXNDC2Q86VQ3 553 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 LARP6Q9BRS8 491 aaKnown RBP7.79□□□□□ -1.16
SCN2A-216ENST00000637367 PANK2Q9BZ23 570 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 RAD21O60216 631 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 HSP90AB4PQ58FF6 505 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 SYTL4Q96C24 671 aaPredicted RBP7.79□□□□□ -1.16
SCN2A-216ENST00000637367 MAP7D2Q96T17 732 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 GDPD2Q9HCC8 539 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 ANKRD30BQ9BXX2 1392 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 PSME1Q06323 249 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 FILIP1Q7Z7B0 1213 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 RALYLQ86SE5 291 aaKnown RBP7.79□□□□□ -1.16
SCN2A-216ENST00000637367 FAM177A1Q8N128 213 aaPredicted RBP7.79□□□□□ -1.16
SCN2A-216ENST00000637367 MTMR7Q9Y216 660 aa7.79□□□□□ -1.16
SCN2A-216ENST00000637367 KINO60870 393 aaKnown RBP7.79□□□□□ -1.16
SCN2A-216ENST00000637367 IPO7O95373 1038 aaKnown RBP7.78□□□□□ -1.16
SCN2A-216ENST00000637367 GPS2Q13227 327 aa7.78□□□□□ -1.16
SCN2A-216ENST00000637367 ZSCAN30Q86W11 494 aa7.78□□□□□ -1.16
SCN2A-216ENST00000637367 TNPO1Q92973 898 aaKnown RBP7.78□□□□□ -1.16
SCN2A-216ENST00000637367 DAPK1P53355 1430 aa7.78□□□□□ -1.16
SCN2A-216ENST00000637367 CWC27Q6UX04 472 aaKnown RBP7.78□□□□□ -1.16
SCN2A-216ENST00000637367 STAC3Q96MF2 364 aa7.78□□□□□ -1.16
SCN2A-216ENST00000637367 TEX35Q5T0J7 233 aa7.78□□□□□ -1.16
SCN2A-216ENST00000637367 NLRP2Q9NX02 1062 aa7.78□□□□□ -1.16
SCN2A-216ENST00000637367 MCM2P49736 904 aa7.77□□□□□ -1.16
SCN2A-216ENST00000637367 HMGN5P82970 282 aaKnown RBP7.77□□□□□ -1.16
SCN2A-216ENST00000637367 CCDC30Q5VVM6 783 aa7.77□□□□□ -1.16
SCN2A-216ENST00000637367 LRRCC1Q9C099 1032 aa7.77□□□□□ -1.16
SCN2A-216ENST00000637367 CDK13Q14004 1512 aaKnown RBP7.77□□□□□ -1.16
SCN2A-216ENST00000637367 NCOA1Q15788 1441 aa7.77□□□□□ -1.17
SCN2A-216ENST00000637367 FYB1O15117 783 aa7.77□□□□□ -1.17
SCN2A-216ENST00000637367 BRPF1P55201 1214 aaPredicted RBP7.77□□□□□ -1.17
SCN2A-216ENST00000637367 LARP1BQ659C4 914 aaKnown RBP7.77□□□□□ -1.17
SCN2A-216ENST00000637367 CDK19Q9BWU1 502 aa7.77□□□□□ -1.17
SCN2A-216ENST00000637367 CIZ1Q9ULV3 898 aaPredicted RBP7.77□□□□□ -1.17
SCN2A-216ENST00000637367 NESP48681 1621 aa7.77□□□□□ -1.17
SCN2A-216ENST00000637367 NUTM1Q86Y26 1132 aa7.77□□□□□ -1.17
SCN2A-216ENST00000637367 WDR33Q9C0J8 1336 aaKnown RBP7.77□□□□□ -1.17
SCN2A-216ENST00000637367 FAM177BA6PVY3 158 aa7.77□□□□□ -1.17
SCN2A-216ENST00000637367 TNMDQ9H2S6 317 aa7.77□□□□□ -1.17
SCN2A-216ENST00000637367 CWC22Q9HCG8 908 aaKnown RBP7.77□□□□□ -1.17
SCN2A-216ENST00000637367 NSD3Q9BZ95 1437 aa7.77□□□□□ -1.17
SCN2A-216ENST00000637367 ARHGAP5Q13017 1502 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 SRGAP3O43295 1099 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 RRP9O43818 475 aaKnown RBP7.76□□□□□ -1.17
SCN2A-216ENST00000637367 DHX16O60231 1041 aaKnown RBP7.76□□□□□ -1.17
SCN2A-216ENST00000637367 TRIM27P14373 513 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 CAMK4Q16566 473 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 MTERF4Q7Z6M4 381 aaKnown RBP7.76□□□□□ -1.17
SCN2A-216ENST00000637367 ARGLU1Q9NWB6 273 aaPredicted RBP7.76□□□□□ -1.17
SCN2A-216ENST00000637367 TNNQ9UQP3 1299 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 CCDC192P0DO97 292 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 PDCP20941 246 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 PSMA5P28066 241 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 JAKMIP1Q96N16 626 aaKnown RBP7.76□□□□□ -1.17
SCN2A-216ENST00000637367 CYP46A1Q9Y6A2 500 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 F6X3S4 739 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 ME1P48163 572 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 TSHZ3Q63HK5 1081 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 MCM10Q7L590 875 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 RAPGEF4Q8WZA2 1011 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 DDX11Q96FC9 970 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 PCDHB15Q9Y5E8 787 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 NINLQ9Y2I6 1382 aa7.76□□□□□ -1.17
SCN2A-216ENST00000637367 STK38Q15208 465 aa7.75□□□□□ -1.17
SCN2A-216ENST00000637367 LRRFIP1Q32MZ4 808 aaKnown RBP7.75□□□□□ -1.17
SCN2A-216ENST00000637367 FBLN1P23142 703 aa7.75□□□□□ -1.17
SCN2A-216ENST00000637367 KRT85P78386 507 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms