RNA–Protein interactions for RNA: ENST00000637175.1

ATRX-223, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-223	ENST00000637175	PNMA1	Q8ND90	353 aa		6.19	□□□□□ -1.42
ATRX-223	ENST00000637175	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	6.19	□□□□□ -1.42
ATRX-223	ENST00000637175	FCF1	Q9Y324	198 aa	Known RBP	6.19	□□□□□ -1.42
ATRX-223	ENST00000637175	ZNF330	Q9Y3S2	320 aa	Predicted RBP	6.19	□□□□□ -1.42
ATRX-223	ENST00000637175	ARID3C	A6NKF2	412 aa		6.18	□□□□□ -1.42
ATRX-223	ENST00000637175	POM121C	A8CG34	1229 aa		6.18	□□□□□ -1.42
ATRX-223	ENST00000637175	ARMC2	Q8NEN0	867 aa		6.18	□□□□□ -1.42
ATRX-223	ENST00000637175	UNC93B1	Q9H1C4	597 aa		6.18	□□□□□ -1.42
ATRX-223	ENST00000637175	PLSCR2	Q9NRY7	297 aa		6.18	□□□□□ -1.42
ATRX-223	ENST00000637175	RNF223	E7ERA6	249 aa		6.17	□□□□□ -1.42
ATRX-223	ENST00000637175	ANKLE1	Q8NAG6	615 aa		6.17	□□□□□ -1.42
ATRX-223	ENST00000637175	ZNF777	Q9ULD5	760 aa	Predicted RBP	6.17	□□□□□ -1.42
ATRX-223	ENST00000637175	PPEF1	O14829	653 aa	Predicted RBP	6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	VAC14	Q08AM6	782 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	NR1H3	Q13133	447 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	PLA2G2C	Q5R387	149 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	NBPF14	Q5TI25	921 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	PDXDC2P	Q6P474	469 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	CCDC24	Q8N4L8	307 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	ADAMTS19	Q8TE59	1207 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	OCSTAMP	Q9BR26	566 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	GPSM3	Q9Y4H4	160 aa		6.16	□□□□□ -1.42
ATRX-223	ENST00000637175	ZBBX	A8MT70	800 aa		6.15	□□□□□ -1.42
ATRX-223	ENST00000637175	FBXO45	P0C2W1	286 aa		6.15	□□□□□ -1.42
ATRX-223	ENST00000637175	GGCX	P38435	758 aa		6.15	□□□□□ -1.42
ATRX-223	ENST00000637175	PPP1R18	Q6NYC8	613 aa		6.15	□□□□□ -1.42
ATRX-223	ENST00000637175	SH3BP5L	Q7L8J4	393 aa		6.15	□□□□□ -1.42
ATRX-223	ENST00000637175	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	6.15	□□□□□ -1.42
ATRX-223	ENST00000637175	SOX11	P35716	441 aa		6.14	□□□□□ -1.43
ATRX-223	ENST00000637175	SH3RF1	Q7Z6J0	888 aa		6.14	□□□□□ -1.43
ATRX-223	ENST00000637175	GLMN	Q92990	594 aa		6.14	□□□□□ -1.43
ATRX-223	ENST00000637175	ALG2	Q9H553	416 aa		6.14	□□□□□ -1.43
ATRX-223	ENST00000637175	PTK2	Q05397	1052 aa		6.13	□□□□□ -1.43
ATRX-223	ENST00000637175	CCDC82	Q8N4S0	544 aa		6.13	□□□□□ -1.43
ATRX-223	ENST00000637175	ZNF511	Q8NB15	262 aa		6.13	□□□□□ -1.43
ATRX-223	ENST00000637175	RPIA	P49247	311 aa		6.12	□□□□□ -1.43
ATRX-223	ENST00000637175	BAP1	Q92560	729 aa		6.12	□□□□□ -1.43
ATRX-223	ENST00000637175	EMID1	Q96A84	441 aa	Predicted RBP	6.12	□□□□□ -1.43
ATRX-223	ENST00000637175	SH3BP2	P78314	561 aa		6.11	□□□□□ -1.43
ATRX-223	ENST00000637175	EIF4G2	P78344	907 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
ATRX-223	ENST00000637175	TRIM32	Q13049	653 aa		6.11	□□□□□ -1.43
ATRX-223	ENST00000637175	C4orf48	Q5BLP8	95 aa		6.11	□□□□□ -1.43
ATRX-223	ENST00000637175	HDGFL1	Q5TGJ6	251 aa		6.11	□□□□□ -1.43
ATRX-223	ENST00000637175	C1QTNF2	Q9BXJ5	285 aa		6.11	□□□□□ -1.43
ATRX-223	ENST00000637175	SERPINA10	Q9UK55	444 aa		6.11	□□□□□ -1.43
ATRX-223	ENST00000637175		A0A0G2JS52	829 aa		6.1	□□□□□ -1.43
ATRX-223	ENST00000637175	LINC01559	Q495D7	138 aa		6.1	□□□□□ -1.43
ATRX-223	ENST00000637175	ADAM32	Q8TC27	787 aa		6.1	□□□□□ -1.43
ATRX-223	ENST00000637175	FOXJ1	Q92949	421 aa		6.1	□□□□□ -1.43
ATRX-223	ENST00000637175	CALR3	Q96L12	384 aa	Known RBP	6.1	□□□□□ -1.43
ATRX-223	ENST00000637175	ARHGAP9	Q9BRR9	750 aa		6.1	□□□□□ -1.43
ATRX-223	ENST00000637175	PLA2G2E	Q9NZK7	142 aa		6.1	□□□□□ -1.43
ATRX-223	ENST00000637175	ZBTB24	O43167	697 aa	Predicted RBP	6.09	□□□□□ -1.43
ATRX-223	ENST00000637175	WNT7B	P56706	349 aa		6.09	□□□□□ -1.43
ATRX-223	ENST00000637175	SKOR1	P84550	965 aa		6.09	□□□□□ -1.43
ATRX-223	ENST00000637175	LIAT1	Q6ZQX7	453 aa		6.09	□□□□□ -1.43
ATRX-223	ENST00000637175	BPHL	Q86WA6	291 aa	Predicted RBP	6.09	□□□□□ -1.43
ATRX-223	ENST00000637175	UCN2	Q96RP3	112 aa		6.09	□□□□□ -1.43
ATRX-223	ENST00000637175	MCCD1	P59942	119 aa	Predicted RBP	6.08	□□□□□ -1.44
ATRX-223	ENST00000637175	SEMA3F	Q13275	785 aa		6.08	□□□□□ -1.44
ATRX-223	ENST00000637175	ERFE	Q4G0M1	354 aa		6.08	□□□□□ -1.44
ATRX-223	ENST00000637175	TRMT44	Q8IYL2	757 aa	Known RBP	6.08	□□□□□ -1.44
ATRX-223	ENST00000637175	ZNF592	Q92610	1267 aa		6.08	□□□□□ -1.44
ATRX-223	ENST00000637175	CCDC97	Q96F63	343 aa	Predicted RBP	6.08	□□□□□ -1.44
ATRX-223	ENST00000637175	MAGEB6P1	A0A0J9YX57	407 aa		6.06	□□□□□ -1.44
ATRX-223	ENST00000637175	ZBTB33	Q86T24	672 aa		6.06	□□□□□ -1.44
ATRX-223	ENST00000637175	ARID3A	Q99856	593 aa		6.06	□□□□□ -1.44
ATRX-223	ENST00000637175	CARD14	Q9BXL6	1004 aa		6.06	□□□□□ -1.44
ATRX-223	ENST00000637175	PPP1R12C	Q9BZL4	782 aa		6.06	□□□□□ -1.44
ATRX-223	ENST00000637175	VARS	P26640	1264 aa	Known RBP	6.05	□□□□□ -1.44
ATRX-223	ENST00000637175	CFAP70	Q5T0N1	1121 aa		6.05	□□□□□ -1.44
ATRX-223	ENST00000637175	PHTF2	Q8N3S3	785 aa		6.05	□□□□□ -1.44
ATRX-223	ENST00000637175	NFATC2IP	Q8NCF5	419 aa		6.05	□□□□□ -1.44
ATRX-223	ENST00000637175	CEP126	Q9P2H0	1117 aa		6.05	□□□□□ -1.44
ATRX-223	ENST00000637175	PCDHB9	Q9Y5E1	797 aa		6.05	□□□□□ -1.44
ATRX-223	ENST00000637175	CD2BP2	O95400	341 aa	Known RBP	6.04	□□□□□ -1.44
ATRX-223	ENST00000637175	SLC19A1	P41440	591 aa		6.04	□□□□□ -1.44
ATRX-223	ENST00000637175	AGER	Q15109	404 aa		6.04	□□□□□ -1.44
ATRX-223	ENST00000637175	SPRYD7	Q5W111	196 aa		6.04	□□□□□ -1.44
ATRX-223	ENST00000637175	DZIP3	Q86Y13	1208 aa	Known RBP	6.04	□□□□□ -1.44
ATRX-223	ENST00000637175	CHIC2	Q9UKJ5	165 aa		6.04	□□□□□ -1.44
ATRX-223	ENST00000637175	MAP4K5	Q9Y4K4	846 aa		6.04	□□□□□ -1.44
ATRX-223	ENST00000637175	PALM3	A6NDB9	673 aa	Predicted RBP	6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	ESPN	B1AK53	854 aa		6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	PIK3CD	O00329	1044 aa		6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	ATP9B	O43861	1147 aa		6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	SRPK2	P78362	688 aa	Known RBP	6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	RC3H1	Q5TC82	1133 aa	Known RBP	6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	TBC1D9	Q6ZT07	1266 aa		6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	MPND	Q8N594	471 aa		6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	FAM174A	Q8TBP5	190 aa		6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	SLC10A4	Q96EP9	437 aa		6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	ARX	Q96QS3	562 aa		6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	CDV3	Q9UKY7	258 aa	Known RBP	6.03	□□□□□ -1.44
ATRX-223	ENST00000637175	WNT7A	O00755	349 aa		6.02	□□□□□ -1.45
ATRX-223	ENST00000637175	SIAH2	O43255	324 aa		6.02	□□□□□ -1.45
ATRX-223	ENST00000637175	CDK15	Q96Q40	435 aa		6.02	□□□□□ -1.45
ATRX-223	ENST00000637175	TFIP11	Q9UBB9	837 aa	Known RBP	6.02	□□□□□ -1.45
ATRX-223	ENST00000637175	MAFB	Q9Y5Q3	323 aa	Predicted RBP	6.02	□□□□□ -1.45
ATRX-223	ENST00000637175		V9GY48	417 aa	Predicted RBP	6.02	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms