RNA–Protein interactions for RNA: ENST00000636901.1

CACNB4-238, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-238	ENST00000636901	TRIM21	P19474	475 aa	Known RBP	3.38	□□□□□ -1.87
CACNB4-238	ENST00000636901	RDX	P35241	583 aa	Known RBP	3.38	□□□□□ -1.87
CACNB4-238	ENST00000636901	FAM161A	Q3B820	660 aa		3.38	□□□□□ -1.87
CACNB4-238	ENST00000636901	HSP90AB4P	Q58FF6	505 aa		3.38	□□□□□ -1.87
CACNB4-238	ENST00000636901	VTI1A	Q96AJ9	217 aa		3.38	□□□□□ -1.87
CACNB4-238	ENST00000636901	ACACA	Q13085	2346 aa		3.38	□□□□□ -1.87
CACNB4-238	ENST00000636901	NEFH	P12036	1026 aa		3.38	□□□□□ -1.87
CACNB4-238	ENST00000636901	HINFP	Q9BQA5	517 aa		3.38	□□□□□ -1.87
CACNB4-238	ENST00000636901	NCOA2	Q15596	1464 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	DOCK8	Q8NF50	2099 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	ZWINT	O95229	277 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	XPC	Q01831	940 aa	Predicted RBP	3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	WDR62	O43379	1518 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	IPO8	O15397	1037 aa	Known RBP	3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	GTF2F1	P35269	517 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	ACRBP	Q8NEB7	543 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	BIN2	Q9UBW5	565 aa	Predicted RBP	3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	AQR	O60306	1485 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	HMMR	O75330	724 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	STK32B	Q9NY57	414 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	ANKRD30B	Q9BXX2	1392 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	PKDREJ	Q9NTG1	2253 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	RXRB	P28702	533 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	ATP6V1E1	P36543	226 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	TPD52L1	Q16890	204 aa	Predicted RBP	3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	COMMD10	Q9Y6G5	202 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	RPGRIP1L	Q68CZ1	1315 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	CCDC89	Q8N998	374 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	KIF20A	O95235	890 aa		3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	HSP90AA2P	Q14568	343 aa	Predicted RBP	3.37	□□□□□ -1.87
CACNB4-238	ENST00000636901	CNOT1	A5YKK6	2376 aa	Known RBP	3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	MAGI2	Q86UL8	1455 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	HSP90AB1	P08238	724 aa	Known RBP	3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	PCM1	Q15154	2024 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	ANKRD62	A6NC57	917 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	RBM27	Q9P2N5	1060 aa	Known RBP	3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	MPDZ	O75970	2070 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	YEATS2	Q9ULM3	1422 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	KIF15	Q9NS87	1388 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	MPHOSPH10	O00566	681 aa	Known RBP	3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	TPM3	P06753	285 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	ERICH3	Q5RHP9	1530 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	RAPGEF3	O95398	923 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	MRPS9	P82933	396 aa	Known RBP	3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	ZHX3	Q9H4I2	956 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	SMC4	Q9NTJ3	1288 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	TEX35	Q5T0J7	233 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	TRPC5	Q9UL62	973 aa	Predicted RBP	3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	GRIN2A	Q12879	1464 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	NUP205	Q92621	2012 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	NEO1	Q92859	1461 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	CLCN6	P51797	869 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	HSP90AB2P	Q58FF8	381 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	RNF20	Q5VTR2	975 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	MYO7B	Q6PIF6	2116 aa		3.36	□□□□□ -1.87
CACNB4-238	ENST00000636901	KIAA2026	Q5HYC2	2103 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	SET	Q01105	290 aa	Predicted RBP	3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	RBM33	Q96EV2	1170 aa	Known RBP	3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	NPHP3	Q7Z494	1330 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	PABPN1L	A6NDY0	278 aa	Known RBP	3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	RUFY2	Q8WXA3	655 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	MDC1	Q14676	2089 aa	Known RBP	3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	CCDC175	P0C221	793 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	PDILT	Q8N807	584 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	PPP1R9B	Q96SB3	815 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	LRP2BP	Q9P2M1	347 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	VASP	P50552	380 aa	Predicted RBP	3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	SCN1A	P35498	2009 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	TBC1D12	O60347	775 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	GRIN3B	O60391	1043 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	AKAP17A	Q02040	695 aa	Known RBP	3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	ZNF467	Q7Z7K2	595 aa	Predicted RBP	3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	PDZRN3	Q9UPQ7	1066 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	ALPK2	Q86TB3	2170 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	PRR29	P0C7W0	189 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	SGIP1	Q9BQI5	828 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	DIAPH3	Q9NSV4	1193 aa		3.35	□□□□□ -1.87
CACNB4-238	ENST00000636901	DHX57	Q6P158	1386 aa	Known RBP	3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	RAB3GAP2	Q9H2M9	1393 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	PTMS	P20962	102 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	COL6A6	A6NMZ7	2263 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	TPM2	P07951	284 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	NLRP13	Q86W25	1043 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	PNMA1	Q8ND90	353 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	PUS7	Q96PZ0	661 aa	Known RBP	3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	MED13	Q9UHV7	2174 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	TTC3	P53804	2025 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	EPS15	P42566	896 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	SMARCC1	Q92922	1105 aa	Predicted RBP	3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	CABP2	Q9NPB3	220 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	SSUH2	Q9Y2M2	353 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	EFCAB5	A4FU69	1503 aa		3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	PCMTD1	Q96MG8	357 aa	Predicted RBP	3.34	□□□□□ -1.87
CACNB4-238	ENST00000636901	ABCA10	Q8WWZ4	1543 aa		3.34	□□□□□ -1.88
CACNB4-238	ENST00000636901	TNR	Q92752	1358 aa		3.34	□□□□□ -1.88
CACNB4-238	ENST00000636901	SCAPER	Q9BY12	1400 aa		3.34	□□□□□ -1.88
CACNB4-238	ENST00000636901	SLU7	O95391	586 aa	Known RBP	3.34	□□□□□ -1.88
CACNB4-238	ENST00000636901	KIAA1211	Q6ZU35	1233 aa		3.34	□□□□□ -1.88
CACNB4-238	ENST00000636901	NOL8	Q76FK4	1167 aa	Known RBP	3.34	□□□□□ -1.88
CACNB4-238	ENST00000636901	RAPGEF4	Q8WZA2	1011 aa		3.34	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms