RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
CTSD-208ENST00000636843 PAK3O75914 559 aaPredicted RBP18.25■□□□□ 0.51
CTSD-208ENST00000636843 BRWD3Q6RI45 1802 aa18.24■□□□□ 0.51
CTSD-208ENST00000636843 A0A0G2JS52 829 aa18.23■□□□□ 0.51
CTSD-208ENST00000636843 MYT1Q01538 1121 aa18.23■□□□□ 0.51
CTSD-208ENST00000636843 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
CTSD-208ENST00000636843 COL14A1Q05707 1796 aaKnown RBP18.23■□□□□ 0.51
CTSD-208ENST00000636843 ATP7BP35670 1465 aa18.23■□□□□ 0.51
CTSD-208ENST00000636843 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
CTSD-208ENST00000636843 CDK19Q9BWU1 502 aa18.23■□□□□ 0.51
CTSD-208ENST00000636843 DEFB132Q7Z7B7 95 aa18.22■□□□□ 0.51
CTSD-208ENST00000636843 ARHGEF28Q8N1W1 1705 aaKnown RBP18.22■□□□□ 0.51
CTSD-208ENST00000636843 PRDM11Q9NQV5 511 aa18.21■□□□□ 0.51
CTSD-208ENST00000636843 SPATA31A5Q5VU36 1347 aa18.21■□□□□ 0.51
CTSD-208ENST00000636843 SPATA31A7Q8IWB4 1347 aa18.21■□□□□ 0.51
CTSD-208ENST00000636843 NRAPQ86VF7 1730 aa18.21■□□□□ 0.5
CTSD-208ENST00000636843 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
CTSD-208ENST00000636843 POLR3AO14802 1390 aaPredicted RBP18.19■□□□□ 0.5
CTSD-208ENST00000636843 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
CTSD-208ENST00000636843 PLEKHG3A1L390 1219 aa18.18■□□□□ 0.5
CTSD-208ENST00000636843 BAG6P46379 1132 aa18.18■□□□□ 0.5
CTSD-208ENST00000636843 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
CTSD-208ENST00000636843 KIAA1210Q9ULL0 1709 aa18.17■□□□□ 0.5
CTSD-208ENST00000636843 CCER1Q8TC90 406 aaPredicted RBP18.17■□□□□ 0.5
CTSD-208ENST00000636843 ACEP12821 1306 aa18.17■□□□□ 0.5
CTSD-208ENST00000636843 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
CTSD-208ENST00000636843 NBPF1Q3BBV0 1214 aa18.16■□□□□ 0.5
CTSD-208ENST00000636843 CRYBG1Q9Y4K1 1723 aa18.16■□□□□ 0.5
CTSD-208ENST00000636843 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
CTSD-208ENST00000636843 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
CTSD-208ENST00000636843 NUTM2GQ5VZR2 741 aa18.13■□□□□ 0.49
CTSD-208ENST00000636843 SPATA31A1Q5TZJ5 1347 aa18.13■□□□□ 0.49
CTSD-208ENST00000636843 CENPJQ9HC77 1338 aaPredicted RBP18.12■□□□□ 0.49
CTSD-208ENST00000636843 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
CTSD-208ENST00000636843 TOPAZ1Q8N9V7 1692 aa18.11■□□□□ 0.49
CTSD-208ENST00000636843 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
CTSD-208ENST00000636843 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
CTSD-208ENST00000636843 THSD7AQ9UPZ6 1657 aa18.11■□□□□ 0.49
CTSD-208ENST00000636843 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
CTSD-208ENST00000636843 USP19O94966 1318 aa18.09■□□□□ 0.49
CTSD-208ENST00000636843 EVA1CP58658 441 aa18.09■□□□□ 0.49
CTSD-208ENST00000636843 FAM182BQ5T319 152 aa18.09■□□□□ 0.49
CTSD-208ENST00000636843 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
CTSD-208ENST00000636843 PHRF1Q9P1Y6 1649 aaKnown RBP18.09■□□□□ 0.49
CTSD-208ENST00000636843 PPIP5K1Q6PFW1 1433 aa18.08■□□□□ 0.48
CTSD-208ENST00000636843 CPDO75976 1380 aa18.08■□□□□ 0.48
CTSD-208ENST00000636843 EN1Q05925 392 aaPredicted RBP18.08■□□□□ 0.48
CTSD-208ENST00000636843 FAM196AQ6ZSG2 479 aa18.08■□□□□ 0.48
CTSD-208ENST00000636843 BARGINQ6ZT62 677 aa18.08■□□□□ 0.48
CTSD-208ENST00000636843 CABP2Q9NPB3 220 aa18.07■□□□□ 0.48
CTSD-208ENST00000636843 DISP2A7MBM2 1401 aa18.07■□□□□ 0.48
CTSD-208ENST00000636843 SSH2Q76I76 1423 aa18.07■□□□□ 0.48
CTSD-208ENST00000636843 GCP02774 474 aa18.06■□□□□ 0.48
CTSD-208ENST00000636843 RGPD1P0DJD0 1748 aa18.05■□□□□ 0.48
CTSD-208ENST00000636843 L3MBTL2Q969R5 705 aa18.05■□□□□ 0.48
CTSD-208ENST00000636843 USP35Q9P2H5 1018 aa18.05■□□□□ 0.48
CTSD-208ENST00000636843 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
CTSD-208ENST00000636843 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
CTSD-208ENST00000636843 CAMTA1Q9Y6Y1 1673 aa18.04■□□□□ 0.48
CTSD-208ENST00000636843 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
CTSD-208ENST00000636843 LARP1Q6PKG0 1096 aaKnown RBP18.03■□□□□ 0.48
CTSD-208ENST00000636843 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
CTSD-208ENST00000636843 THRAP3Q9Y2W1 955 aaKnown RBP18.03■□□□□ 0.48
CTSD-208ENST00000636843 TRIM37O94972 964 aa18.03■□□□□ 0.48
CTSD-208ENST00000636843 PDE3BQ13370 1112 aa18.03■□□□□ 0.48
CTSD-208ENST00000636843 EVC2Q86UK5 1308 aa18.01■□□□□ 0.47
CTSD-208ENST00000636843 NLRP6P59044 892 aa18.01■□□□□ 0.47
CTSD-208ENST00000636843 CAMKK2Q96RR4 588 aa18.01■□□□□ 0.47
CTSD-208ENST00000636843 LRP5O75197 1615 aa18.01■□□□□ 0.47
CTSD-208ENST00000636843 USP6P35125 1406 aa18.01■□□□□ 0.47
CTSD-208ENST00000636843 LMO7Q8WWI1 1683 aa18■□□□□ 0.47
CTSD-208ENST00000636843 EZH2Q15910 746 aaKnown RBP18■□□□□ 0.47
CTSD-208ENST00000636843 PARD3Q8TEW0 1356 aa17.99■□□□□ 0.47
CTSD-208ENST00000636843 APBA3O96018 575 aa17.99■□□□□ 0.47
CTSD-208ENST00000636843 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
CTSD-208ENST00000636843 R3HDM1Q15032 1099 aaKnown RBP17.98■□□□□ 0.47
CTSD-208ENST00000636843 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
CTSD-208ENST00000636843 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
CTSD-208ENST00000636843 C11orf95C9JLR9 678 aaPredicted RBP17.98■□□□□ 0.47
CTSD-208ENST00000636843 COL5A2P05997 1499 aaPredicted RBP17.97■□□□□ 0.47
CTSD-208ENST00000636843 AATKQ6ZMQ8 1374 aa17.97■□□□□ 0.47
CTSD-208ENST00000636843 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
CTSD-208ENST00000636843 ROCK2O75116 1388 aaKnown RBP17.96■□□□□ 0.47
CTSD-208ENST00000636843 CRB1P82279 1406 aa17.96■□□□□ 0.47
CTSD-208ENST00000636843 SLIT3O75094 1523 aa17.95■□□□□ 0.46
CTSD-208ENST00000636843 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
CTSD-208ENST00000636843 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
CTSD-208ENST00000636843 TRPM1Q7Z4N2 1603 aa17.94■□□□□ 0.46
CTSD-208ENST00000636843 TTC21BQ7Z4L5 1316 aa17.92■□□□□ 0.46
CTSD-208ENST00000636843 KCNH5Q8NCM2 988 aa17.92■□□□□ 0.46
CTSD-208ENST00000636843 TTC21AQ8NDW8 1320 aa17.92■□□□□ 0.46
CTSD-208ENST00000636843 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
CTSD-208ENST00000636843 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
CTSD-208ENST00000636843 ARHGEF25Q86VW2 580 aa17.9■□□□□ 0.46
CTSD-208ENST00000636843 PARP4Q9UKK3 1724 aaKnown RBP17.9■□□□□ 0.46
CTSD-208ENST00000636843 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.45
CTSD-208ENST00000636843 DDB1Q16531 1140 aa17.89■□□□□ 0.45
CTSD-208ENST00000636843 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.45
CTSD-208ENST00000636843 AXIN2Q9Y2T1 843 aa17.89■□□□□ 0.45
CTSD-208ENST00000636843 PIK3C2AO00443 1686 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms