RNA–Protein interactions for RNA: ENST00000636775.1

LGI1-223, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,050 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-223	ENST00000636775	COL3A1	P02461	1466 aa	Predicted RBP	12.43	□□□□□ -0.42
LGI1-223	ENST00000636775	FYB1	O15117	783 aa		12.42	□□□□□ -0.42
LGI1-223	ENST00000636775	MTHFS	P49914	203 aa		12.42	□□□□□ -0.42
LGI1-223	ENST00000636775	ERICH6B	Q5W0A0	696 aa		12.42	□□□□□ -0.42
LGI1-223	ENST00000636775	ZNF521	Q96K83	1311 aa		12.42	□□□□□ -0.42
LGI1-223	ENST00000636775	PTCH1	Q13635	1447 aa		12.41	□□□□□ -0.42
LGI1-223	ENST00000636775	EDC4	Q6P2E9	1401 aa	Known RBP	12.4	□□□□□ -0.42
LGI1-223	ENST00000636775	NUDT16	Q96DE0	195 aa	Known RBP	12.4	□□□□□ -0.42
LGI1-223	ENST00000636775	TBX22	Q9Y458	520 aa		12.4	□□□□□ -0.42
LGI1-223	ENST00000636775	PRR36	Q9H6K5	1346 aa		12.4	□□□□□ -0.42
LGI1-223	ENST00000636775	NALCN	Q8IZF0	1738 aa		12.4	□□□□□ -0.42
LGI1-223	ENST00000636775	FMN2	Q9NZ56	1722 aa		12.4	□□□□□ -0.42
LGI1-223	ENST00000636775	APAF1	O14727	1248 aa		12.39	□□□□□ -0.43
LGI1-223	ENST00000636775	CFAP53	Q96M91	514 aa		12.39	□□□□□ -0.43
LGI1-223	ENST00000636775	NKTR	P30414	1462 aa	Known RBP	12.39	□□□□□ -0.43
LGI1-223	ENST00000636775	RCAN3	Q9UKA8	241 aa		12.38	□□□□□ -0.43
LGI1-223	ENST00000636775	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.38	□□□□□ -0.43
LGI1-223	ENST00000636775	PPP4R2	Q9NY27	417 aa		12.38	□□□□□ -0.43
LGI1-223	ENST00000636775	AMOTL2	Q9Y2J4	779 aa		12.38	□□□□□ -0.43
LGI1-223	ENST00000636775	CCDC61	Q9Y6R9	512 aa		12.37	□□□□□ -0.43
LGI1-223	ENST00000636775	GOLGA2	Q08379	1002 aa		12.36	□□□□□ -0.43
LGI1-223	ENST00000636775	DUSP27	Q5VZP5	1158 aa		12.36	□□□□□ -0.43
LGI1-223	ENST00000636775	DLG5	Q8TDM6	1919 aa		12.36	□□□□□ -0.43
LGI1-223	ENST00000636775	LRRC7	Q96NW7	1537 aa		12.36	□□□□□ -0.43
LGI1-223	ENST00000636775	RRP1	P56182	461 aa	Known RBP	12.35	□□□□□ -0.43
LGI1-223	ENST00000636775	XIRP1	Q702N8	1843 aa	Known RBP	12.35	□□□□□ -0.43
LGI1-223	ENST00000636775	RUNDC1	Q96C34	613 aa		12.34	□□□□□ -0.43
LGI1-223	ENST00000636775	PIK3R4	Q99570	1358 aa		12.34	□□□□□ -0.43
LGI1-223	ENST00000636775	MARF1	Q9Y4F3	1742 aa	Known RBP	12.34	□□□□□ -0.43
LGI1-223	ENST00000636775	SLFN5	Q08AF3	891 aa		12.34	□□□□□ -0.43
LGI1-223	ENST00000636775	NWD1	Q149M9	1564 aa		12.34	□□□□□ -0.43
LGI1-223	ENST00000636775	PNPLA6	Q8IY17	1366 aa		12.34	□□□□□ -0.43
LGI1-223	ENST00000636775	UBAP1L	F5GYI3	381 aa		12.33	□□□□□ -0.44
LGI1-223	ENST00000636775	NME9	Q86XW9	330 aa		12.33	□□□□□ -0.44
LGI1-223	ENST00000636775	TRMT2A	Q8IZ69	625 aa	Known RBP	12.33	□□□□□ -0.44
LGI1-223	ENST00000636775	NGEF	Q8N5V2	710 aa		12.33	□□□□□ -0.44
LGI1-223	ENST00000636775	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.33	□□□□□ -0.44
LGI1-223	ENST00000636775	TSHZ2	Q9NRE2	1034 aa		12.33	□□□□□ -0.44
LGI1-223	ENST00000636775	NUTM2F	A1L443	756 aa		12.32	□□□□□ -0.44
LGI1-223	ENST00000636775	ZRANB1	Q9UGI0	708 aa		12.32	□□□□□ -0.44
LGI1-223	ENST00000636775	PIK3C2A	O00443	1686 aa		12.32	□□□□□ -0.44
LGI1-223	ENST00000636775	USP6	P35125	1406 aa		12.32	□□□□□ -0.44
LGI1-223	ENST00000636775	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	FBLN1	P23142	703 aa		12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	TCP11L2	Q8N4U5	519 aa		12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	ZNF692	Q9BU19	519 aa	Predicted RBP	12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	PEAK1	Q9H792	1746 aa		12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	USP54	Q70EL1	1684 aa		12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	PLEKHG3	A1L390	1219 aa		12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	KCNA6	P17658	529 aa		12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	B4GALNT3	Q6L9W6	998 aa		12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	POLK	Q9UBT6	870 aa		12.31	□□□□□ -0.44
LGI1-223	ENST00000636775	ACE	P12821	1306 aa		12.3	□□□□□ -0.44
LGI1-223	ENST00000636775	WWC1	Q8IX03	1113 aa		12.3	□□□□□ -0.44
LGI1-223	ENST00000636775	RRP7A	Q9Y3A4	280 aa	Known RBP	12.3	□□□□□ -0.44
LGI1-223	ENST00000636775	AATK	Q6ZMQ8	1374 aa		12.3	□□□□□ -0.44
LGI1-223	ENST00000636775	TOM1	O60784	492 aa		12.3	□□□□□ -0.44
LGI1-223	ENST00000636775	PHF23	Q9BUL5	403 aa	Predicted RBP	12.3	□□□□□ -0.44
LGI1-223	ENST00000636775	OVOS2	A0A0J9YW53	1432 aa		12.29	□□□□□ -0.44
LGI1-223	ENST00000636775	OVOS2	Q6IE36	1432 aa		12.29	□□□□□ -0.44
LGI1-223	ENST00000636775	U2SURP	O15042	1029 aa	Known RBP	12.29	□□□□□ -0.44
LGI1-223	ENST00000636775	PLEKHF1	Q96S99	279 aa		12.29	□□□□□ -0.44
LGI1-223	ENST00000636775	SSH2	Q76I76	1423 aa		12.29	□□□□□ -0.44
LGI1-223	ENST00000636775		E9PSI1	815 aa		12.28	□□□□□ -0.44
LGI1-223	ENST00000636775	DIAPH1	O60610	1272 aa	Known RBP	12.28	□□□□□ -0.44
LGI1-223	ENST00000636775	NEUROD2	Q15784	382 aa		12.28	□□□□□ -0.44
LGI1-223	ENST00000636775	ANKAR	Q7Z5J8	1434 aa		12.28	□□□□□ -0.44
LGI1-223	ENST00000636775	TTC21B	Q7Z4L5	1316 aa		12.28	□□□□□ -0.44
LGI1-223	ENST00000636775	COG3	Q96JB2	828 aa		12.28	□□□□□ -0.44
LGI1-223	ENST00000636775	EMILIN1	Q9Y6C2	1016 aa		12.28	□□□□□ -0.44
LGI1-223	ENST00000636775	RGPD1	P0DJD0	1748 aa		12.28	□□□□□ -0.44
LGI1-223	ENST00000636775	PLIN1	O60240	522 aa		12.27	□□□□□ -0.45
LGI1-223	ENST00000636775	CCDC27	Q2M243	656 aa		12.27	□□□□□ -0.45
LGI1-223	ENST00000636775	NCBP3	Q53F19	620 aa	Known RBP	12.26	□□□□□ -0.45
LGI1-223	ENST00000636775	PPM1G	O15355	546 aa	Predicted RBP	12.26	□□□□□ -0.45
LGI1-223	ENST00000636775	EXOC6	Q8TAG9	804 aa		12.26	□□□□□ -0.45
LGI1-223	ENST00000636775	LTN1	O94822	1766 aa		12.25	□□□□□ -0.45
LGI1-223	ENST00000636775	PMFBP1	Q8TBY8	1022 aa		12.25	□□□□□ -0.45
LGI1-223	ENST00000636775	WDR63	Q8IWG1	891 aa		12.25	□□□□□ -0.45
LGI1-223	ENST00000636775	TMEM94	Q12767	1356 aa		12.24	□□□□□ -0.45
LGI1-223	ENST00000636775	RRS1	Q15050	365 aa	Known RBP	12.24	□□□□□ -0.45
LGI1-223	ENST00000636775	TMPO	P42166	694 aa	Known RBP	12.23	□□□□□ -0.45
LGI1-223	ENST00000636775	PIP4K2B	P78356	416 aa		12.23	□□□□□ -0.45
LGI1-223	ENST00000636775	CCDC136	Q96JN2	1154 aa		12.23	□□□□□ -0.45
LGI1-223	ENST00000636775	MAPK8IP3	Q9UPT6	1336 aa		12.23	□□□□□ -0.45
LGI1-223	ENST00000636775	USP31	Q70CQ4	1352 aa		12.23	□□□□□ -0.45
LGI1-223	ENST00000636775	PRKCSH	P14314	528 aa	Predicted RBP	12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	IL13	P35225	146 aa		12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	C20orf194	Q5TEA3	1177 aa		12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	TTC21A	Q8NDW8	1320 aa		12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	RSPH6A	Q9H0K4	717 aa		12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	ADGRL3	Q9HAR2	1447 aa		12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	FCHSD2	O94868	740 aa		12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	PROSER2	Q86WR7	435 aa	Predicted RBP	12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	CRBN	Q96SW2	442 aa		12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	TRIM35	Q9UPQ4	493 aa		12.22	□□□□□ -0.45
LGI1-223	ENST00000636775	NCOA3	Q9Y6Q9	1424 aa		12.21	□□□□□ -0.45
LGI1-223	ENST00000636775	NGDN	Q8NEJ9	315 aa	Known RBP	12.21	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms