RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 NINLQ9Y2I6 1382 aa10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 DDX11L8A8MPP1 907 aa10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 ZPR1O75312 459 aa10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 SEPT11Q9NVA2 429 aaKnown RBP10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 SURF6O75683 361 aaKnown RBP10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 CCDC73Q6ZRK6 1079 aa10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 CNTROBQ8N137 903 aa10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 HSP90AB4PQ58FF6 505 aa10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 C1orf115Q9H7X2 142 aa10.65□□□□□ -0.7
CHRNA7-219ENST00000636709 NGLY1Q96IV0 654 aa10.65□□□□□ -0.71
CHRNA7-219ENST00000636709 PRAM1Q96QH2 718 aa10.65□□□□□ -0.71
CHRNA7-219ENST00000636709 SSBP05455 408 aaKnown RBP eCLIP10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 GPS2Q13227 327 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 GNAI1P63096 354 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 STK3Q13188 491 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 CCDC30Q5VVM6 783 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 ANKIB1Q9P2G1 1089 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 USP47Q96K76 1375 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 TTC16Q8NEE8 873 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 NEFHP12036 1026 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 EXOC6Q8TAG9 804 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 MAGEC2Q9UBF1 373 aaPredicted RBP10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 RAI14Q9P0K7 980 aa10.64□□□□□ -0.71
CHRNA7-219ENST00000636709 CCDC173Q0VFZ6 552 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 INTS3Q68E01 1043 aaKnown RBP10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 TANGO6Q9C0B7 1094 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 SPG7Q9UQ90 795 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 FANCD2Q9BXW9 1451 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 RDXP35241 583 aaKnown RBP10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 CCDC57Q2TAC2 916 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 ANKLE2Q86XL3 938 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 THEMISQ8N1K5 641 aaPredicted RBP10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 RUNDC1Q96C34 613 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 TMOD2Q9NZR1 351 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 TIMELESSQ9UNS1 1208 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 C16orf71Q8IYS4 520 aaPredicted RBP10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 FMNL2Q96PY5 1086 aa10.63□□□□□ -0.71
CHRNA7-219ENST00000636709 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
CHRNA7-219ENST00000636709 TXLNAP40222 546 aa10.62□□□□□ -0.71
CHRNA7-219ENST00000636709 CENPQQ7L2Z9 268 aaPredicted RBP10.62□□□□□ -0.71
CHRNA7-219ENST00000636709 TRMT1LQ7Z2T5 733 aaKnown RBP10.62□□□□□ -0.71
CHRNA7-219ENST00000636709 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHRNA7-219ENST00000636709 MROH2BQ7Z745 1585 aa10.62□□□□□ -0.71
CHRNA7-219ENST00000636709 SOGA3Q5TF21 947 aa10.62□□□□□ -0.71
CHRNA7-219ENST00000636709 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
CHRNA7-219ENST00000636709 SDF4Q9BRK5 362 aa10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 CLEC11AQ9Y240 323 aa10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 CLASRPQ8N2M8 674 aaKnown RBP10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 CADPSQ9ULU8 1353 aa10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 PTCD1O75127 700 aaKnown RBP10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 DHX37Q8IY37 1157 aaKnown RBP10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 CRACR2BQ8N4Y2 399 aaPredicted RBP10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 AK7Q96M32 723 aa10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 SSR1P43307 286 aaKnown RBP10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 ZNF644Q9H582 1327 aaPredicted RBP10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 ABCF2Q9UG63 623 aa10.61□□□□□ -0.71
CHRNA7-219ENST00000636709 TDO2P48775 406 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 PANK1Q8TE04 598 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 LRP2BPQ9P2M1 347 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 AFAP1Q8N556 730 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 SLC4A8Q2Y0W8 1093 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 IFT57Q9NWB7 429 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 BTBD11A6QL63 1104 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 LIG1P18858 919 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 SMC2O95347 1197 aa10.6□□□□□ -0.71
CHRNA7-219ENST00000636709 PSMD1Q99460 953 aa10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 PSMA5P28066 241 aa10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 MPRIPQ6WCQ1 1025 aa10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 CDK19Q9BWU1 502 aa10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 SULT6B1Q6IMI4 303 aa10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 IPO9Q96P70 1041 aaKnown RBP10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 IGHMBP2P38935 993 aaKnown RBP10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
CHRNA7-219ENST00000636709 NACAP1Q9BZK3 213 aa10.58□□□□□ -0.72
CHRNA7-219ENST00000636709 PRKAR2BP31323 418 aa10.58□□□□□ -0.72
CHRNA7-219ENST00000636709 RPGRQ92834 1020 aaKnown RBP10.58□□□□□ -0.72
CHRNA7-219ENST00000636709 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHRNA7-219ENST00000636709 RRS1Q15050 365 aaKnown RBP10.58□□□□□ -0.72
CHRNA7-219ENST00000636709 ZNF771Q7L3S4 317 aaPredicted RBP10.58□□□□□ -0.72
CHRNA7-219ENST00000636709 RRP1P56182 461 aaKnown RBP10.58□□□□□ -0.72
CHRNA7-219ENST00000636709 DRC1Q96MC2 740 aa10.58□□□□□ -0.72
CHRNA7-219ENST00000636709 POLR3DP05423 398 aaPredicted RBP10.57□□□□□ -0.72
CHRNA7-219ENST00000636709 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
CHRNA7-219ENST00000636709 SEPT7Q16181 437 aaKnown RBP10.57□□□□□ -0.72
CHRNA7-219ENST00000636709 CDR1P51861 262 aa10.56□□□□□ -0.72
CHRNA7-219ENST00000636709 MNS1Q8NEH6 495 aa10.56□□□□□ -0.72
CHRNA7-219ENST00000636709 IDH1O75874 414 aaKnown RBP10.56□□□□□ -0.72
CHRNA7-219ENST00000636709 RAPGEF3O95398 923 aa10.56□□□□□ -0.72
CHRNA7-219ENST00000636709 TMOD3Q9NYL9 352 aa10.56□□□□□ -0.72
CHRNA7-219ENST00000636709 NAT10Q9H0A0 1025 aaKnown RBP10.56□□□□□ -0.72
CHRNA7-219ENST00000636709 PODXL2Q9NZ53 605 aa10.55□□□□□ -0.72
CHRNA7-219ENST00000636709 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
CHRNA7-219ENST00000636709 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.72
CHRNA7-219ENST00000636709 DEF6Q9H4E7 631 aa10.55□□□□□ -0.72
CHRNA7-219ENST00000636709 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
CHRNA7-219ENST00000636709 STARD3NLO95772 234 aa10.55□□□□□ -0.72
CHRNA7-219ENST00000636709 TRIM21P19474 475 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms