RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 TULP4Q9NRJ4 1543 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 TNS3Q68CZ2 1445 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 SPATA31A3Q5VYP0 1347 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 RPGRIP1LQ68CZ1 1315 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 MINK1Q8N4C8 1332 aaPredicted RBP2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 MYOM1P52179 1685 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 ATP7BP35670 1465 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 FAM83GA6ND36 823 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 RBM6P78332 1123 aaKnown RBP2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 NBPF1Q3BBV0 1214 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 NUTM2GQ5VZR2 741 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 ZNF772Q68DY9 489 aaPredicted RBP2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 DEFB132Q7Z7B7 95 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 FNBP4Q8N3X1 1017 aaPredicted RBP2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 PRAM1Q96QH2 718 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 PHF8Q9UPP1 1060 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 TRAK1Q9UPV9 953 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 COL24A1Q17RW2 1714 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 DOT1LQ8TEK3 1739 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 RGPD3A6NKT7 1758 aaPredicted RBP2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 RGPD4Q7Z3J3 1758 aa2.41□□□□□ -2.02
SYNGAP1-216ENST00000636640 LY75O60449 1722 aa2.4□□□□□ -2.02
SYNGAP1-216ENST00000636640 QSER1Q2KHR3 1735 aa2.4□□□□□ -2.02
SYNGAP1-216ENST00000636640 CACNA1SQ13698 1873 aa2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 CHRNA2Q15822 529 aa2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 DCAF11Q8TEB1 546 aa2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 GJD4Q96KN9 370 aaPredicted RBP2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 SIN3AQ96ST3 1273 aa2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 SRCAPQ6ZRS2 3230 aa2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 NHSQ6T4R5 1651 aa2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 FAM208AQ9UK61 1670 aaKnown RBP2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 NPHP3Q7Z494 1330 aa2.4□□□□□ -2.03
SYNGAP1-216ENST00000636640 ANKRD26Q9UPS8 1709 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 TOGARAM1Q9Y4F4 1720 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 PSDA5PKW4 1024 aaPredicted RBP2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 LMOD2Q6P5Q4 547 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 PTF1AQ7RTS3 328 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 UNC5CLQ8IV45 518 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 SEPT12Q8IYM1 358 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 SIRT1Q96EB6 747 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 ZRANB1Q9UGI0 708 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 TRPC5Q9UL62 973 aaPredicted RBP2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 ANKARQ7Z5J8 1434 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 UBR3Q6ZT12 1888 aa2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 ACIN1Q9UKV3 1341 aaKnown RBP2.39□□□□□ -2.03
SYNGAP1-216ENST00000636640 SBNO1A3KN83 1393 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 ATAD2Q6PL18 1390 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 KIAA0232Q92628 1395 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 SLIT3O75094 1523 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 NFAT5O94916 1531 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 MYH14Q7Z406 1995 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 WASLO00401 505 aaPredicted RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 ONECUT3O60422 494 aaPredicted RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 ZC3H6P61129 1189 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 EN1Q05925 392 aaPredicted RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 PSME1Q06323 249 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 FAM98CQ17RN3 349 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 NBPF8Q3BBV2 869 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 NUDT16Q96DE0 195 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 CDK19Q9BWU1 502 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 CABP2Q9NPB3 220 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 BTG4Q9NY30 223 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 POGKQ9P215 609 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 CCDC9Q9Y3X0 531 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 N4BP2Q86UW6 1770 aaPredicted RBP2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 PAPPAQ13219 1627 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 CD163L1Q9NR16 1453 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 ACEP12821 1306 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 SPATA31A5Q5VU36 1347 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 SPATA31A7Q8IWB4 1347 aa2.38□□□□□ -2.03
SYNGAP1-216ENST00000636640 C5P01031 1676 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 SBF1O95248 1867 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 BRCA1P38398 1863 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 KIAA1551Q9HCM1 1747 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 DLG5Q8TDM6 1919 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 BLMP54132 1417 aaPredicted RBP2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 PPIP5K1Q6PFW1 1433 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 SSH2Q76I76 1423 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 PAK3O75914 559 aaPredicted RBP2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 VPS72Q15906 364 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 EZH2Q15910 746 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 LARP1Q6PKG0 1096 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 L3MBTL2Q969R5 705 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 PDGFDQ9GZP0 370 aaPredicted RBP2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 STRN4Q9NRL3 753 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 USP35Q9P2H5 1018 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 AXIN2Q9Y2T1 843 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 COL5A2P05997 1499 aaPredicted RBP2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 AFDNP55196 1824 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 SPATA31A1Q5TZJ5 1347 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 PKD1L3Q7Z443 1732 aa2.37□□□□□ -2.03
SYNGAP1-216ENST00000636640 POLR3AO14802 1390 aaPredicted RBP2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 SCN11AQ9UI33 1791 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 USP6P35125 1406 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 A0A0G2JS52 829 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 PLEKHG3A1L390 1219 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 ZBTB7CA1YPR0 619 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 TRIM37O94972 964 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 FBLN1P23142 703 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 HAP1P54257 671 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms