RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 BECN2A8MW95 431 aa17.28■□□□□ 0.36
GABRB3-219ENST00000636466 RNF214Q8ND24 703 aa17.28■□□□□ 0.36
GABRB3-219ENST00000636466 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
GABRB3-219ENST00000636466 ZC3H6P61129 1189 aaKnown RBP17.28■□□□□ 0.36
GABRB3-219ENST00000636466 BICD2Q8TD16 824 aa17.27■□□□□ 0.36
GABRB3-219ENST00000636466 GNAI3P08754 354 aa17.27■□□□□ 0.36
GABRB3-219ENST00000636466 WASHC4Q2M389 1173 aa17.27■□□□□ 0.36
GABRB3-219ENST00000636466 PDE4CQ08493 712 aa17.26■□□□□ 0.35
GABRB3-219ENST00000636466 MVPQ14764 893 aaKnown RBP17.26■□□□□ 0.35
GABRB3-219ENST00000636466 SKOR2Q2VWA4 1001 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-219ENST00000636466 MCM10Q7L590 875 aa17.26■□□□□ 0.35
GABRB3-219ENST00000636466 SIL1Q9H173 461 aa17.26■□□□□ 0.35
GABRB3-219ENST00000636466 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
GABRB3-219ENST00000636466 MAP4K4O95819 1239 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-219ENST00000636466 ZNF530Q6P9A1 599 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-219ENST00000636466 TPM4P67936 248 aa17.26■□□□□ 0.35
GABRB3-219ENST00000636466 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-219ENST00000636466 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
GABRB3-219ENST00000636466 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
GABRB3-219ENST00000636466 RPRD2Q5VT52 1461 aaKnown RBP17.25■□□□□ 0.35
GABRB3-219ENST00000636466 WDR63Q8IWG1 891 aa17.25■□□□□ 0.35
GABRB3-219ENST00000636466 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
GABRB3-219ENST00000636466 ERC2O15083 957 aa17.25■□□□□ 0.35
GABRB3-219ENST00000636466 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
GABRB3-219ENST00000636466 TMEM57Q8N5G2 664 aa17.25■□□□□ 0.35
GABRB3-219ENST00000636466 FSD1Q9BTV5 496 aa17.25■□□□□ 0.35
GABRB3-219ENST00000636466 CCDC27Q2M243 656 aa17.25■□□□□ 0.35
GABRB3-219ENST00000636466 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
GABRB3-219ENST00000636466 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
GABRB3-219ENST00000636466 GOLGA6L19H0YKK7 550 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 MARCH6O60337 910 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 AKAP17AQ02040 695 aaKnown RBP17.24■□□□□ 0.35
GABRB3-219ENST00000636466 MAP3K1Q13233 1512 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 RNF20Q5VTR2 975 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 CCDC34Q96HJ3 373 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 DISP3Q9P2K9 1392 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
GABRB3-219ENST00000636466 IL1RAPL2Q9NP60 686 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 CUL7Q14999 1698 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
GABRB3-219ENST00000636466 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
GABRB3-219ENST00000636466 CPLX2Q6PUV4 134 aaKnown RBP17.23■□□□□ 0.35
GABRB3-219ENST00000636466 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
GABRB3-219ENST00000636466 MYL6BP14649 208 aa17.23■□□□□ 0.35
GABRB3-219ENST00000636466 GNAI2P04899 355 aa17.23■□□□□ 0.35
GABRB3-219ENST00000636466 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
GABRB3-219ENST00000636466 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
GABRB3-219ENST00000636466 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
GABRB3-219ENST00000636466 AAMPQ13685 434 aa17.22■□□□□ 0.35
GABRB3-219ENST00000636466 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
GABRB3-219ENST00000636466 TRDNQ13061 729 aa17.22■□□□□ 0.35
GABRB3-219ENST00000636466 FYB1O15117 783 aa17.22■□□□□ 0.35
GABRB3-219ENST00000636466 NUCB2P80303 420 aa17.22■□□□□ 0.35
GABRB3-219ENST00000636466 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
GABRB3-219ENST00000636466 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
GABRB3-219ENST00000636466 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
GABRB3-219ENST00000636466 BRPF3Q9ULD4 1205 aa17.21■□□□□ 0.35
GABRB3-219ENST00000636466 FCHSD2O94868 740 aa17.2■□□□□ 0.34
GABRB3-219ENST00000636466 NFXL1Q6ZNB6 911 aa17.2■□□□□ 0.34
GABRB3-219ENST00000636466 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
GABRB3-219ENST00000636466 EXOC6BQ9Y2D4 811 aa17.2■□□□□ 0.34
GABRB3-219ENST00000636466 TRAK2O60296 914 aa17.2■□□□□ 0.34
GABRB3-219ENST00000636466 ATAD2Q6PL18 1390 aa17.2■□□□□ 0.34
GABRB3-219ENST00000636466 FOXO3O43524 673 aa17.2■□□□□ 0.34
GABRB3-219ENST00000636466 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
GABRB3-219ENST00000636466 ATP10BO94823 1461 aa17.19■□□□□ 0.34
GABRB3-219ENST00000636466 CAVIN1Q6NZI2 390 aaKnown RBP17.19■□□□□ 0.34
GABRB3-219ENST00000636466 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
GABRB3-219ENST00000636466 LRRFIP1Q32MZ4 808 aaKnown RBP17.19■□□□□ 0.34
GABRB3-219ENST00000636466 ZNF592Q92610 1267 aa17.19■□□□□ 0.34
GABRB3-219ENST00000636466 NOS1P29475 1434 aa17.19■□□□□ 0.34
GABRB3-219ENST00000636466 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
GABRB3-219ENST00000636466 NFE2L2Q16236 605 aa17.18■□□□□ 0.34
GABRB3-219ENST00000636466 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
GABRB3-219ENST00000636466 RARSP54136 660 aaKnown RBP17.18■□□□□ 0.34
GABRB3-219ENST00000636466 MPNDQ8N594 471 aa17.18■□□□□ 0.34
GABRB3-219ENST00000636466 SRCIN1Q9C0H9 1055 aa17.18■□□□□ 0.34
GABRB3-219ENST00000636466 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
GABRB3-219ENST00000636466 PRPF40AO75400 957 aaKnown RBP17.17■□□□□ 0.34
GABRB3-219ENST00000636466 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
GABRB3-219ENST00000636466 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
GABRB3-219ENST00000636466 RALYLQ86SE5 291 aaKnown RBP17.17■□□□□ 0.34
GABRB3-219ENST00000636466 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
GABRB3-219ENST00000636466 ATP2B1P20020 1258 aa17.17■□□□□ 0.34
GABRB3-219ENST00000636466 TPD52L1Q16890 204 aaPredicted RBP17.17■□□□□ 0.34
GABRB3-219ENST00000636466 CCAR2Q8N163 923 aaKnown RBP17.17■□□□□ 0.34
GABRB3-219ENST00000636466 TRIM29Q14134 588 aa17.16■□□□□ 0.34
GABRB3-219ENST00000636466 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
GABRB3-219ENST00000636466 DUSP27Q5VZP5 1158 aa17.16■□□□□ 0.34
GABRB3-219ENST00000636466 NUP153P49790 1475 aaKnown RBP17.16■□□□□ 0.34
GABRB3-219ENST00000636466 F6X3S4 739 aa17.15■□□□□ 0.34
GABRB3-219ENST00000636466 FIBPO43427 364 aa17.15■□□□□ 0.34
GABRB3-219ENST00000636466 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
GABRB3-219ENST00000636466 TATP17735 454 aaPredicted RBP17.15■□□□□ 0.34
GABRB3-219ENST00000636466 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
GABRB3-219ENST00000636466 FANCAO15360 1455 aa17.15■□□□□ 0.34
GABRB3-219ENST00000636466 KIF14Q15058 1648 aa17.15■□□□□ 0.34
GABRB3-219ENST00000636466 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
GABRB3-219ENST00000636466 SMARCA5O60264 1052 aaPredicted RBP17.15■□□□□ 0.34
GABRB3-219ENST00000636466 STK11IPQ8N1F8 1099 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms