RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 ATP2B4P23634 1241 aa11.09□□□□□ -0.63
SMARCA2-250ENST00000636367 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-250ENST00000636367 FAM174AQ8TBP5 190 aa11.09□□□□□ -0.63
SMARCA2-250ENST00000636367 GCGRP47871 477 aa11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 NAALADL2Q58DX5 795 aa11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 FAM196BA6NMK8 535 aa11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 SMAPO00193 183 aa11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 C7P10643 843 aa11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 USP46P62068 366 aa11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 SYMPKQ92797 1274 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-250ENST00000636367 ZNF326Q5BKZ1 582 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-250ENST00000636367 CLP1Q92989 425 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-250ENST00000636367 FBXO45P0C2W1 286 aa11.06□□□□□ -0.64
SMARCA2-250ENST00000636367 MKRN1Q9UHC7 482 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-250ENST00000636367 PTK7Q13308 1070 aa11.06□□□□□ -0.64
SMARCA2-250ENST00000636367 ASTLQ6HA08 431 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-250ENST00000636367 FBXO33Q7Z6M2 555 aa11.06□□□□□ -0.64
SMARCA2-250ENST00000636367 PNMA1Q8ND90 353 aa11.05□□□□□ -0.64
SMARCA2-250ENST00000636367 TATDN2Q93075 761 aa11.05□□□□□ -0.64
SMARCA2-250ENST00000636367 ANO2Q9NQ90 1003 aa11.05□□□□□ -0.64
SMARCA2-250ENST00000636367 VAMP1P23763 118 aa11.04□□□□□ -0.64
SMARCA2-250ENST00000636367 TSNAXIP1Q2TAA8 658 aa11.04□□□□□ -0.64
SMARCA2-250ENST00000636367 RASA1P20936 1047 aa11.04□□□□□ -0.64
SMARCA2-250ENST00000636367 NR1H3Q13133 447 aa11.04□□□□□ -0.64
SMARCA2-250ENST00000636367 ZNF211Q13398 564 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-250ENST00000636367 FAM200AQ8TCP9 573 aa11.04□□□□□ -0.64
SMARCA2-250ENST00000636367 UBXN4Q92575 508 aa11.04□□□□□ -0.64
SMARCA2-250ENST00000636367 PLEKHM2Q8IWE5 1019 aa11.03□□□□□ -0.64
SMARCA2-250ENST00000636367 KHSRPQ92945 711 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMARCA2-250ENST00000636367 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.64
SMARCA2-250ENST00000636367 ABL1P00519 1130 aa11.02□□□□□ -0.64
SMARCA2-250ENST00000636367 NBPF26B4DH59 902 aa11.02□□□□□ -0.65
SMARCA2-250ENST00000636367 SLC10A3P09131 477 aa11.02□□□□□ -0.65
SMARCA2-250ENST00000636367 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
SMARCA2-250ENST00000636367 H3BRB1 525 aa11.01□□□□□ -0.65
SMARCA2-250ENST00000636367 NCOA4Q13772 614 aa11.01□□□□□ -0.65
SMARCA2-250ENST00000636367 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-250ENST00000636367 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
SMARCA2-250ENST00000636367 TUT1Q9H6E5 874 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-250ENST00000636367 SEC24BO95487 1268 aa11□□□□□ -0.65
SMARCA2-250ENST00000636367 NUDT7P0C024 238 aa11□□□□□ -0.65
SMARCA2-250ENST00000636367 CANXP27824 592 aaKnown RBP11□□□□□ -0.65
SMARCA2-250ENST00000636367 KCNH2Q12809 1159 aa11□□□□□ -0.65
SMARCA2-250ENST00000636367 ANKMY2Q8IV38 441 aa11□□□□□ -0.65
SMARCA2-250ENST00000636367 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
SMARCA2-250ENST00000636367 C9orf131Q5VYM1 1079 aa10.99□□□□□ -0.65
SMARCA2-250ENST00000636367 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
SMARCA2-250ENST00000636367 GIMAP6Q6P9H5 292 aa10.98□□□□□ -0.65
SMARCA2-250ENST00000636367 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
SMARCA2-250ENST00000636367 MAPK1P28482 360 aa10.98□□□□□ -0.65
SMARCA2-250ENST00000636367 ERCC5P28715 1186 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-250ENST00000636367 DPYDQ12882 1025 aa10.98□□□□□ -0.65
SMARCA2-250ENST00000636367 ZNF594Q96JF6 807 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-250ENST00000636367 CDCA7Q9BWT1 371 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-250ENST00000636367 TTBK1Q5TCY1 1321 aaPredicted RBP10.97□□□□□ -0.65
SMARCA2-250ENST00000636367 PPP1R3GB7ZBB8 358 aa10.97□□□□□ -0.65
SMARCA2-250ENST00000636367 PRMT3O60678 531 aa10.97□□□□□ -0.65
SMARCA2-250ENST00000636367 SF3A1Q15459 793 aaKnown RBP10.96□□□□□ -0.65
SMARCA2-250ENST00000636367 ZBBXA8MT70 800 aa10.95□□□□□ -0.66
SMARCA2-250ENST00000636367 NESP48681 1621 aa10.95□□□□□ -0.66
SMARCA2-250ENST00000636367 FUT2Q10981 343 aa10.95□□□□□ -0.66
SMARCA2-250ENST00000636367 BACH2Q9BYV9 841 aa10.94□□□□□ -0.66
SMARCA2-250ENST00000636367 POTEFA5A3E0 1075 aa10.93□□□□□ -0.66
SMARCA2-250ENST00000636367 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
SMARCA2-250ENST00000636367 PRIMPOLQ96LW4 560 aa10.93□□□□□ -0.66
SMARCA2-250ENST00000636367 ATP5J2-PTCD1G3V325 749 aa10.93□□□□□ -0.66
SMARCA2-250ENST00000636367 LGR5O75473 907 aa10.93□□□□□ -0.66
SMARCA2-250ENST00000636367 HDLBPQ00341 1268 aaKnown RBP10.93□□□□□ -0.66
SMARCA2-250ENST00000636367 GLYCTKQ8IVS8 523 aa10.93□□□□□ -0.66
SMARCA2-250ENST00000636367 OGFOD1Q8N543 542 aa10.93□□□□□ -0.66
SMARCA2-250ENST00000636367 CCDC88BA6NC98 1476 aa10.92□□□□□ -0.66
SMARCA2-250ENST00000636367 ANKRD62A6NC57 917 aa10.92□□□□□ -0.66
SMARCA2-250ENST00000636367 CLDN10P78369 228 aa10.92□□□□□ -0.66
SMARCA2-250ENST00000636367 DPH6Q7L8W6 267 aa10.92□□□□□ -0.66
SMARCA2-250ENST00000636367 DHX37Q8IY37 1157 aaKnown RBP10.92□□□□□ -0.66
SMARCA2-250ENST00000636367 ASB16Q96NS5 453 aa10.91□□□□□ -0.66
SMARCA2-250ENST00000636367 ICMTO60725 284 aa10.91□□□□□ -0.66
SMARCA2-250ENST00000636367 MTMR3Q13615 1198 aa10.91□□□□□ -0.66
SMARCA2-250ENST00000636367 SWI5Q1ZZU3 235 aa10.91□□□□□ -0.66
SMARCA2-250ENST00000636367 PROX2Q3B8N5 592 aa10.91□□□□□ -0.66
SMARCA2-250ENST00000636367 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
SMARCA2-250ENST00000636367 ZNF662Q6ZS27 426 aa10.91□□□□□ -0.66
SMARCA2-250ENST00000636367 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
SMARCA2-250ENST00000636367 PLPP7Q8NBV4 271 aa10.9□□□□□ -0.66
SMARCA2-250ENST00000636367 ECM1Q16610 540 aa10.89□□□□□ -0.67
SMARCA2-250ENST00000636367 C1orf216Q8TAB5 229 aa10.89□□□□□ -0.67
SMARCA2-250ENST00000636367 DNAJC2Q99543 621 aaKnown RBP10.89□□□□□ -0.67
SMARCA2-250ENST00000636367 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
SMARCA2-250ENST00000636367 ANKRD13AQ8IZ07 590 aa10.89□□□□□ -0.67
SMARCA2-250ENST00000636367 KIAA1024Q9UPX6 916 aa10.89□□□□□ -0.67
SMARCA2-250ENST00000636367 OCLNQ16625 522 aa10.88□□□□□ -0.67
SMARCA2-250ENST00000636367 SLFNL1Q499Z3 407 aa10.88□□□□□ -0.67
SMARCA2-250ENST00000636367 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
SMARCA2-250ENST00000636367 HIRIP3Q9BW71 556 aaPredicted RBP10.88□□□□□ -0.67
SMARCA2-250ENST00000636367 EGFL7Q9UHF1 273 aa10.88□□□□□ -0.67
SMARCA2-250ENST00000636367 CXXC1Q9P0U4 656 aaPredicted RBP10.87□□□□□ -0.67
SMARCA2-250ENST00000636367 SEPT3Q9UH03 358 aa10.87□□□□□ -0.67
SMARCA2-250ENST00000636367 FKBPLQ9UIM3 349 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms