RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MYZAPP0CAP1 466 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 CCDC6Q16204 474 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 CCNB3Q8WWL7 1395 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 ROCK2O75116 1388 aaKnown RBP7.1□□□□□ -1.27
SCN1A-212ENST00000636194 G3BP1Q13283 466 aaKnown RBP eCLIP7.1□□□□□ -1.27
SCN1A-212ENST00000636194 CNGA1P29973 690 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 C6orf163Q5TEZ5 329 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.1□□□□□ -1.27
SCN1A-212ENST00000636194 MCM3P25205 808 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 SDF4Q9BRK5 362 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 STK26Q9P289 416 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 CFAP45Q9UL16 551 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 GOLGA6L9A6NEM1 432 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 SAFB2Q14151 953 aaKnown RBP eCLIP7.1□□□□□ -1.27
SCN1A-212ENST00000636194 ZMYND15Q9H091 742 aa7.1□□□□□ -1.27
SCN1A-212ENST00000636194 UACAQ9BZF9 1416 aa7.09□□□□□ -1.27
SCN1A-212ENST00000636194 TAOK3Q9H2K8 898 aa7.09□□□□□ -1.27
SCN1A-212ENST00000636194 VPS36Q86VN1 386 aa7.09□□□□□ -1.27
SCN1A-212ENST00000636194 ZNF397Q8NF99 534 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-212ENST00000636194 FOXD4L5Q5VV16 416 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-212ENST00000636194 DCAF11Q8TEB1 546 aa7.09□□□□□ -1.27
SCN1A-212ENST00000636194 FOXD4L4Q8WXT5 416 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-212ENST00000636194 MKRN1Q9UHC7 482 aaKnown RBP7.09□□□□□ -1.27
SCN1A-212ENST00000636194 RCAN3Q9UKA8 241 aa7.09□□□□□ -1.27
SCN1A-212ENST00000636194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.09□□□□□ -1.28
SCN1A-212ENST00000636194 FLIIQ13045 1269 aa7.09□□□□□ -1.28
SCN1A-212ENST00000636194 FAM114A1Q8IWE2 563 aa7.09□□□□□ -1.28
SCN1A-212ENST00000636194 DCAF1Q9Y4B6 1507 aa7.09□□□□□ -1.28
SCN1A-212ENST00000636194 KIF3CO14782 793 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 CCDC14Q49A88 953 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 FAM13BQ9NYF5 915 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 SMC3Q9UQE7 1217 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 PPFIBP1Q86W92 1011 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 NAP1L3Q99457 506 aaPredicted RBP7.08□□□□□ -1.28
SCN1A-212ENST00000636194 FAM184BQ9ULE4 1060 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 TTC36A6NLP5 189 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 CEP112Q8N8E3 955 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 MPHOSPH6Q99547 160 aaKnown RBP7.08□□□□□ -1.28
SCN1A-212ENST00000636194 SSR1P43307 286 aaKnown RBP7.08□□□□□ -1.28
SCN1A-212ENST00000636194 DDX46Q7L014 1031 aaKnown RBP7.08□□□□□ -1.28
SCN1A-212ENST00000636194 PLCD3Q8N3E9 789 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 FAM107BQ9H098 131 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 ODF2LQ9ULJ1 636 aa7.08□□□□□ -1.28
SCN1A-212ENST00000636194 MAP9Q49MG5 647 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 HIP1O00291 1037 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 LUZP1Q86V48 1076 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 TICAM2Q86XR7 235 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 ZNF396Q96N95 335 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-212ENST00000636194 AK9Q5TCS8 1911 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 CCDC82Q8N4S0 544 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 KIF5AQ12840 1032 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 IMMTQ16891 758 aaKnown RBP7.07□□□□□ -1.28
SCN1A-212ENST00000636194 NCAPGQ9BPX3 1015 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 HIRIP3Q9BW71 556 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-212ENST00000636194 KIF4AO95239 1232 aa7.07□□□□□ -1.28
SCN1A-212ENST00000636194 DZIP1Q86YF9 867 aaKnown RBP7.07□□□□□ -1.28
SCN1A-212ENST00000636194 KIF6Q6ZMV9 814 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 SCLT1Q96NL6 688 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 CCDC89Q8N998 374 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 SMC6Q96SB8 1091 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 ZNF287Q9HBT7 754 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 PPP1R1BQ9UD71 204 aaPredicted RBP7.06□□□□□ -1.28
SCN1A-212ENST00000636194 EEA1Q15075 1411 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 NOL3O60936 208 aaKnown RBP7.06□□□□□ -1.28
SCN1A-212ENST00000636194 FERMT2Q96AC1 680 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 SATB1Q01826 763 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.06□□□□□ -1.28
SCN1A-212ENST00000636194 GSTTP1A0A1W2PQM5 241 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 SH3BP5O60239 455 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 TANGO6Q9C0B7 1094 aa7.06□□□□□ -1.28
SCN1A-212ENST00000636194 IBSPP21815 317 aaPredicted RBP7.05□□□□□ -1.28
SCN1A-212ENST00000636194 TAF4BQ92750 862 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 MICALCLQ6ZW33 695 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 STAC3Q96MF2 364 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 IKBKGQ9Y6K9 419 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 LRRFIP2Q9Y608 721 aaKnown RBP7.05□□□□□ -1.28
SCN1A-212ENST00000636194 EIF4G1Q04637 1599 aaKnown RBP7.05□□□□□ -1.28
SCN1A-212ENST00000636194 VPS37CA5D8V6 355 aaPredicted RBP7.05□□□□□ -1.28
SCN1A-212ENST00000636194 SLC4A3P48751 1232 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 WASHC2CQ9Y4E1 1318 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 CBFA2T2O43439 604 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 CTNNA2P26232 953 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 FOXD4L6Q3SYB3 417 aaPredicted RBP7.05□□□□□ -1.28
SCN1A-212ENST00000636194 FOXD4L3Q6VB84 417 aaPredicted RBP7.05□□□□□ -1.28
SCN1A-212ENST00000636194 FAM43AQ8N2R8 423 aa7.05□□□□□ -1.28
SCN1A-212ENST00000636194 UQCRHP07919 91 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 FOXD4L1Q9NU39 408 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 ATP2B2Q01814 1243 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 CACYBPQ9HB71 228 aaKnown RBP7.04□□□□□ -1.28
SCN1A-212ENST00000636194 ZNF76P36508 570 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 WDR63Q8IWG1 891 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 NACAP1Q9BZK3 213 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 TTC12Q9H892 705 aaPredicted RBP7.04□□□□□ -1.28
SCN1A-212ENST00000636194 ANAPC4Q9UJX5 808 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 FSD2A1L4K1 749 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 GMNNO75496 209 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 CCDC57Q2TAC2 916 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 INTS3Q68E01 1043 aaKnown RBP7.04□□□□□ -1.28
SCN1A-212ENST00000636194 MIER1Q8N108 512 aa7.04□□□□□ -1.28
SCN1A-212ENST00000636194 SENP3-EIF4A1A0A087X0R7 540 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms