RNA–Protein interactions for RNA: ENST00000636138.1

CACNA1D-208, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-208ENST00000636138 NUP155O75694 1391 aa13.16□□□□□ -0.3
CACNA1D-208ENST00000636138 NINLQ9Y2I6 1382 aa13.16□□□□□ -0.3
CACNA1D-208ENST00000636138 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
CACNA1D-208ENST00000636138 IFT172Q9UG01 1749 aa13.13□□□□□ -0.31
CACNA1D-208ENST00000636138 CABLES1Q8TDN4 633 aa13.13□□□□□ -0.31
CACNA1D-208ENST00000636138 COL14A1Q05707 1796 aaKnown RBP13.12□□□□□ -0.31
CACNA1D-208ENST00000636138 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
CACNA1D-208ENST00000636138 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
CACNA1D-208ENST00000636138 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
CACNA1D-208ENST00000636138 PPLO60437 1756 aa13.12□□□□□ -0.31
CACNA1D-208ENST00000636138 LMOD2Q6P5Q4 547 aa13.1□□□□□ -0.31
CACNA1D-208ENST00000636138 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
CACNA1D-208ENST00000636138 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
CACNA1D-208ENST00000636138 KNDC1Q76NI1 1749 aa13.1□□□□□ -0.31
CACNA1D-208ENST00000636138 CHD4Q14839 1912 aa13.09□□□□□ -0.31
CACNA1D-208ENST00000636138 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
CACNA1D-208ENST00000636138 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
CACNA1D-208ENST00000636138 MPHOSPH9Q99550 1183 aa13.09□□□□□ -0.31
CACNA1D-208ENST00000636138 ARHGEF10O15013 1369 aa13.08□□□□□ -0.31
CACNA1D-208ENST00000636138 ABCB7O75027 752 aa13.08□□□□□ -0.32
CACNA1D-208ENST00000636138 TRIM37O94972 964 aa13.08□□□□□ -0.32
CACNA1D-208ENST00000636138 APBA3O96018 575 aa13.07□□□□□ -0.32
CACNA1D-208ENST00000636138 C1QTNF8P60827 252 aa13.07□□□□□ -0.32
CACNA1D-208ENST00000636138 NBPF8Q3BBV2 869 aa13.07□□□□□ -0.32
CACNA1D-208ENST00000636138 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
CACNA1D-208ENST00000636138 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
CACNA1D-208ENST00000636138 BTG4Q9NY30 223 aa13.07□□□□□ -0.32
CACNA1D-208ENST00000636138 MYOM1P52179 1685 aa13.07□□□□□ -0.32
CACNA1D-208ENST00000636138 FAM83GA6ND36 823 aa13.06□□□□□ -0.32
CACNA1D-208ENST00000636138 VGFO15240 615 aaPredicted RBP13.06□□□□□ -0.32
CACNA1D-208ENST00000636138 KCNQ2O43526 872 aa13.06□□□□□ -0.32
CACNA1D-208ENST00000636138 PSME1Q06323 249 aa13.05□□□□□ -0.32
CACNA1D-208ENST00000636138 SBNO1A3KN83 1393 aa13.05□□□□□ -0.32
CACNA1D-208ENST00000636138 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
CACNA1D-208ENST00000636138 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
CACNA1D-208ENST00000636138 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
CACNA1D-208ENST00000636138 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
CACNA1D-208ENST00000636138 TECPR2O15040 1411 aa13.04□□□□□ -0.32
CACNA1D-208ENST00000636138 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
CACNA1D-208ENST00000636138 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
CACNA1D-208ENST00000636138 STK26Q9P289 416 aa13.03□□□□□ -0.32
CACNA1D-208ENST00000636138 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
CACNA1D-208ENST00000636138 NRXN1Q9ULB1 1477 aa13.03□□□□□ -0.32
CACNA1D-208ENST00000636138 CRYBG1Q9Y4K1 1723 aa13.02□□□□□ -0.32
CACNA1D-208ENST00000636138 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
CACNA1D-208ENST00000636138 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
CACNA1D-208ENST00000636138 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
CACNA1D-208ENST00000636138 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.33
CACNA1D-208ENST00000636138 ALS2Q96Q42 1657 aa13.02□□□□□ -0.33
CACNA1D-208ENST00000636138 RGPD3A6NKT7 1758 aaPredicted RBP13□□□□□ -0.33
CACNA1D-208ENST00000636138 RGPD4Q7Z3J3 1758 aa13□□□□□ -0.33
CACNA1D-208ENST00000636138 POLA2Q14181 598 aa13□□□□□ -0.33
CACNA1D-208ENST00000636138 RPGRIP1LQ68CZ1 1315 aa12.98□□□□□ -0.33
CACNA1D-208ENST00000636138 SPATA31A1Q5TZJ5 1347 aa12.96□□□□□ -0.33
CACNA1D-208ENST00000636138 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
CACNA1D-208ENST00000636138 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.33
CACNA1D-208ENST00000636138 DLC1Q96QB1 1528 aa12.96□□□□□ -0.33
CACNA1D-208ENST00000636138 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
CACNA1D-208ENST00000636138 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
CACNA1D-208ENST00000636138 PDE3BQ13370 1112 aa12.95□□□□□ -0.34
CACNA1D-208ENST00000636138 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
CACNA1D-208ENST00000636138 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
CACNA1D-208ENST00000636138 YTHDC2Q9H6S0 1430 aaKnown RBP12.94□□□□□ -0.34
CACNA1D-208ENST00000636138 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
CACNA1D-208ENST00000636138 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
CACNA1D-208ENST00000636138 PMFBP1Q8TBY8 1022 aa12.93□□□□□ -0.34
CACNA1D-208ENST00000636138 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
CACNA1D-208ENST00000636138 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-208ENST00000636138 ANKARQ7Z5J8 1434 aa12.92□□□□□ -0.34
CACNA1D-208ENST00000636138 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-208ENST00000636138 PARP4Q9UKK3 1724 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-208ENST00000636138 GPRASP1Q5JY77 1395 aa12.92□□□□□ -0.34
CACNA1D-208ENST00000636138 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
CACNA1D-208ENST00000636138 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
CACNA1D-208ENST00000636138 TMEM132EQ6IEE7 984 aa12.91□□□□□ -0.34
CACNA1D-208ENST00000636138 KIAA0232Q92628 1395 aa12.91□□□□□ -0.34
CACNA1D-208ENST00000636138 FHDC1Q9C0D6 1143 aaPredicted RBP12.9□□□□□ -0.34
CACNA1D-208ENST00000636138 SSH2Q76I76 1423 aa12.89□□□□□ -0.35
CACNA1D-208ENST00000636138 CHRNA2Q15822 529 aa12.89□□□□□ -0.35
CACNA1D-208ENST00000636138 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 PTGER2P43116 358 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
CACNA1D-208ENST00000636138 UTRNP46939 3433 aa12.87□□□□□ -0.35
CACNA1D-208ENST00000636138 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
CACNA1D-208ENST00000636138 BCL11BQ9C0K0 894 aaPredicted RBP12.87□□□□□ -0.35
CACNA1D-208ENST00000636138 ITSN1Q15811 1721 aa12.86□□□□□ -0.35
CACNA1D-208ENST00000636138 BARGINQ6ZT62 677 aa12.86□□□□□ -0.35
CACNA1D-208ENST00000636138 SPATA31E1Q6ZUB1 1445 aa12.86□□□□□ -0.35
CACNA1D-208ENST00000636138 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
CACNA1D-208ENST00000636138 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
CACNA1D-208ENST00000636138 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
CACNA1D-208ENST00000636138 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms