RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 CDK13Q14004 1512 aaKnown RBP7.58□□□□□ -1.2
GABRB3-218ENST00000635994 MYBBP1AQ9BQG0 1328 aaKnown RBP7.58□□□□□ -1.2
GABRB3-218ENST00000635994 KRT18P05783 430 aaKnown RBP7.58□□□□□ -1.2
GABRB3-218ENST00000635994 EZRP15311 586 aaKnown RBP7.58□□□□□ -1.2
GABRB3-218ENST00000635994 CENPQQ7L2Z9 268 aaPredicted RBP7.58□□□□□ -1.2
GABRB3-218ENST00000635994 PNISRQ8TF01 805 aaKnown RBP7.58□□□□□ -1.2
GABRB3-218ENST00000635994 NACAP1Q9BZK3 213 aa7.58□□□□□ -1.2
GABRB3-218ENST00000635994 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.58□□□□□ -1.2
GABRB3-218ENST00000635994 SASS6Q6UVJ0 657 aa7.58□□□□□ -1.2
GABRB3-218ENST00000635994 CLUAP1Q96AJ1 413 aa7.58□□□□□ -1.2
GABRB3-218ENST00000635994 KIF7Q2M1P5 1343 aa7.58□□□□□ -1.2
GABRB3-218ENST00000635994 FILIP1LQ4L180 1135 aa7.58□□□□□ -1.2
GABRB3-218ENST00000635994 PROSER2Q86WR7 435 aaPredicted RBP7.58□□□□□ -1.2
GABRB3-218ENST00000635994 SMARCE1Q969G3 411 aa7.58□□□□□ -1.2
GABRB3-218ENST00000635994 PDCL3Q9H2J4 239 aa7.58□□□□□ -1.2
GABRB3-218ENST00000635994 UGGT2Q9NYU1 1516 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 CCP110O43303 1012 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 NEBLO76041 1014 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 TATP17735 454 aaPredicted RBP7.57□□□□□ -1.2
GABRB3-218ENST00000635994 HSP90B2PQ58FF3 399 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 ZSCAN25Q6NSZ9 544 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 HOMER1Q86YM7 354 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 MAGEC2Q9UBF1 373 aaPredicted RBP7.57□□□□□ -1.2
GABRB3-218ENST00000635994 PPP1R1BQ9UD71 204 aaPredicted RBP7.57□□□□□ -1.2
GABRB3-218ENST00000635994 TSPYL4Q9UJ04 414 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 SMC3Q9UQE7 1217 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 INTS3Q68E01 1043 aaKnown RBP7.57□□□□□ -1.2
GABRB3-218ENST00000635994 SUPT6HQ7KZ85 1726 aaKnown RBP7.57□□□□□ -1.2
GABRB3-218ENST00000635994 GNAI3P08754 354 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 NEUROD6Q96NK8 337 aa7.57□□□□□ -1.2
GABRB3-218ENST00000635994 MINK1Q8N4C8 1332 aaPredicted RBP7.57□□□□□ -1.2
GABRB3-218ENST00000635994 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 TMEM87AQ8NBN3 555 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 PPP6R1Q9UPN7 881 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 DDX49Q9Y6V7 483 aaKnown RBP7.56□□□□□ -1.2
GABRB3-218ENST00000635994 STIM1Q13586 685 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 SOGA3Q5TF21 947 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 TXNDC2Q86VQ3 553 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 NUCB2P80303 420 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 GZF1Q9H116 711 aaPredicted RBP7.56□□□□□ -1.2
GABRB3-218ENST00000635994 ZNF287Q9HBT7 754 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 BMP2KQ9NSY1 1161 aaPredicted RBP7.56□□□□□ -1.2
GABRB3-218ENST00000635994 LRRC9Q6ZRR7 1453 aa7.56□□□□□ -1.2
GABRB3-218ENST00000635994 POTEJP0CG39 1038 aa7.55□□□□□ -1.2
GABRB3-218ENST00000635994 CCDC158Q5M9N0 1113 aa7.55□□□□□ -1.2
GABRB3-218ENST00000635994 ZNF710Q8N1W2 664 aa7.55□□□□□ -1.2
GABRB3-218ENST00000635994 PDCP20941 246 aa7.55□□□□□ -1.2
GABRB3-218ENST00000635994 TNIP1Q15025 636 aa7.55□□□□□ -1.2
GABRB3-218ENST00000635994 CAGE1Q8TC20 777 aa7.55□□□□□ -1.2
GABRB3-218ENST00000635994 UBTFL1P0CB47 393 aaPredicted RBP7.55□□□□□ -1.2
GABRB3-218ENST00000635994 PIP4K2BP78356 416 aa7.55□□□□□ -1.2
GABRB3-218ENST00000635994 NOM1Q5C9Z4 860 aaKnown RBP7.55□□□□□ -1.2
GABRB3-218ENST00000635994 CLASRPQ8N2M8 674 aaKnown RBP7.55□□□□□ -1.2
GABRB3-218ENST00000635994 CCDC30Q5VVM6 783 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 PPP4R3AQ6IN85 833 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 MNS1Q8NEH6 495 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 ZNHIT6Q9NWK9 470 aaKnown RBP7.54□□□□□ -1.2
GABRB3-218ENST00000635994 SPG7Q9UQ90 795 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.54□□□□□ -1.2
GABRB3-218ENST00000635994 CETN2P41208 172 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 CNTROBQ8N137 903 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 C9orf84Q5VXU9 1444 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 FGD6Q6ZV73 1430 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 FYB1O15117 783 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 RABEP1Q15276 862 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 CCDC57Q2TAC2 916 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 CCDC146Q8IYE0 955 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 ZNF644Q9H582 1327 aaPredicted RBP7.54□□□□□ -1.2
GABRB3-218ENST00000635994 DACH1Q9UI36 760 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
GABRB3-218ENST00000635994 NLRP6P59044 892 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
GABRB3-218ENST00000635994 CFAP74Q9C0B2 1584 aa7.53□□□□□ -1.2
GABRB3-218ENST00000635994 LETM1O95202 739 aaPredicted RBP7.53□□□□□ -1.2
GABRB3-218ENST00000635994 CCDC97Q96F63 343 aaPredicted RBP7.53□□□□□ -1.2
GABRB3-218ENST00000635994 ZNF396Q96N95 335 aaPredicted RBP7.53□□□□□ -1.2
GABRB3-218ENST00000635994 RBM42Q9BTD8 480 aaKnown RBP7.53□□□□□ -1.2
GABRB3-218ENST00000635994 RIPK4P57078 832 aa7.53□□□□□ -1.2
GABRB3-218ENST00000635994 CNNM1Q9NRU3 951 aa7.53□□□□□ -1.2
GABRB3-218ENST00000635994 NOL7Q9UMY1 257 aaKnown RBP7.53□□□□□ -1.2
GABRB3-218ENST00000635994 CCDC141Q6ZP82 1450 aa7.53□□□□□ -1.2
GABRB3-218ENST00000635994 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
GABRB3-218ENST00000635994 SEPT7Q16181 437 aaKnown RBP7.53□□□□□ -1.2
GABRB3-218ENST00000635994 AMER1Q5JTC6 1135 aaPredicted RBP7.53□□□□□ -1.2
GABRB3-218ENST00000635994 NEFHP12036 1026 aa7.52□□□□□ -1.2
GABRB3-218ENST00000635994 MCM2P49736 904 aa7.52□□□□□ -1.2
GABRB3-218ENST00000635994 DZIP1LQ8IYY4 767 aaKnown RBP7.52□□□□□ -1.2
GABRB3-218ENST00000635994 ZNF652Q9Y2D9 606 aa7.52□□□□□ -1.2
GABRB3-218ENST00000635994 ARAP1Q96P48 1450 aa7.52□□□□□ -1.2
GABRB3-218ENST00000635994 PCF11O94913 1555 aaKnown RBP7.52□□□□□ -1.21
GABRB3-218ENST00000635994 PDIA4P13667 645 aaKnown RBP7.52□□□□□ -1.21
GABRB3-218ENST00000635994 FAM161AQ3B820 660 aa7.52□□□□□ -1.21
GABRB3-218ENST00000635994 RUNDC1Q96C34 613 aa7.52□□□□□ -1.21
GABRB3-218ENST00000635994 MPHOSPH6Q99547 160 aaKnown RBP7.52□□□□□ -1.21
GABRB3-218ENST00000635994 VPS37CA5D8V6 355 aaPredicted RBP7.52□□□□□ -1.21
GABRB3-218ENST00000635994 SMC2O95347 1197 aa7.52□□□□□ -1.21
GABRB3-218ENST00000635994 FSD1Q9BTV5 496 aa7.52□□□□□ -1.21
GABRB3-218ENST00000635994 PANK3Q9H999 370 aa7.52□□□□□ -1.21
GABRB3-218ENST00000635994 RBM5P52756 815 aaKnown RBP eCLIP7.51□□□□□ -1.21
GABRB3-218ENST00000635994 FEZ1Q99689 392 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms