RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 JCADQ9P266 1359 aa20.95■□□□□ 0.94
CLN8-209ENST00000635970 NRKQ7Z2Y5 1582 aa20.95■□□□□ 0.94
CLN8-209ENST00000635970 LRRC59Q96AG4 307 aaKnown RBP20.94■□□□□ 0.94
CLN8-209ENST00000635970 SLC12A5Q9H2X9 1139 aa20.94■□□□□ 0.94
CLN8-209ENST00000635970 FANCIQ9NVI1 1328 aa20.94■□□□□ 0.94
CLN8-209ENST00000635970 TNS3Q68CZ2 1445 aa20.94■□□□□ 0.94
CLN8-209ENST00000635970 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
CLN8-209ENST00000635970 PUS7Q96PZ0 661 aaKnown RBP20.94■□□□□ 0.94
CLN8-209ENST00000635970 COL22A1Q8NFW1 1626 aaPredicted RBP20.93■□□□□ 0.94
CLN8-209ENST00000635970 PNPLA6Q8IY17 1366 aa20.93■□□□□ 0.94
CLN8-209ENST00000635970 POLR3GLQ9BT43 218 aa20.92■□□□□ 0.94
CLN8-209ENST00000635970 USP6P35125 1406 aa20.92■□□□□ 0.94
CLN8-209ENST00000635970 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
CLN8-209ENST00000635970 SPATA31A3Q5VYP0 1347 aa20.92■□□□□ 0.94
CLN8-209ENST00000635970 SBNO1A3KN83 1393 aa20.92■□□□□ 0.94
CLN8-209ENST00000635970 CDCA8Q53HL2 280 aa20.91■□□□□ 0.94
CLN8-209ENST00000635970 ABCA3Q99758 1704 aa20.9■□□□□ 0.94
CLN8-209ENST00000635970 A0A1W2PP64 1363 aa20.9■□□□□ 0.94
CLN8-209ENST00000635970 PAK3O75914 559 aaPredicted RBP20.9■□□□□ 0.94
CLN8-209ENST00000635970 HNRNPUQ00839 825 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLN8-209ENST00000635970 LMOD2Q6P5Q4 547 aa20.89■□□□□ 0.93
CLN8-209ENST00000635970 NINLQ9Y2I6 1382 aa20.89■□□□□ 0.93
CLN8-209ENST00000635970 PIK3C2AO00443 1686 aa20.88■□□□□ 0.93
CLN8-209ENST00000635970 LRP6O75581 1613 aa20.88■□□□□ 0.93
CLN8-209ENST00000635970 CRYBG1Q9Y4K1 1723 aa20.88■□□□□ 0.93
CLN8-209ENST00000635970 KTN1Q86UP2 1357 aaKnown RBP20.88■□□□□ 0.93
CLN8-209ENST00000635970 PLEKHG5O94827 1062 aa20.88■□□□□ 0.93
CLN8-209ENST00000635970 MED1Q15648 1581 aaPredicted RBP20.87■□□□□ 0.93
CLN8-209ENST00000635970 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
CLN8-209ENST00000635970 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
CLN8-209ENST00000635970 WASHC2AQ641Q2 1341 aa20.85■□□□□ 0.93
CLN8-209ENST00000635970 MARF1Q9Y4F3 1742 aaKnown RBP20.85■□□□□ 0.93
CLN8-209ENST00000635970 ARHGEF10O15013 1369 aa20.84■□□□□ 0.93
CLN8-209ENST00000635970 ANKRD36BQ8N2N9 1353 aa20.84■□□□□ 0.93
CLN8-209ENST00000635970 PHRF1Q9P1Y6 1649 aaKnown RBP20.84■□□□□ 0.93
CLN8-209ENST00000635970 NUTM2BA6NNL0 878 aaPredicted RBP20.84■□□□□ 0.93
CLN8-209ENST00000635970 NUTM2EB1AL46 878 aaPredicted RBP20.84■□□□□ 0.93
CLN8-209ENST00000635970 NUTM2GQ5VZR2 741 aa20.84■□□□□ 0.93
CLN8-209ENST00000635970 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
CLN8-209ENST00000635970 NUTM2AQ8IVF1 878 aaPredicted RBP20.84■□□□□ 0.93
CLN8-209ENST00000635970 SPATA31A6Q5VVP1 1343 aa20.84■□□□□ 0.93
CLN8-209ENST00000635970 ZNF692Q9BU19 519 aaPredicted RBP20.83■□□□□ 0.93
CLN8-209ENST00000635970 TERF2IPQ9NYB0 399 aa20.83■□□□□ 0.93
CLN8-209ENST00000635970 CABLES1Q8TDN4 633 aa20.82■□□□□ 0.92
CLN8-209ENST00000635970 TTC21BQ7Z4L5 1316 aa20.82■□□□□ 0.92
CLN8-209ENST00000635970 PPP4R2Q9NY27 417 aa20.81■□□□□ 0.92
CLN8-209ENST00000635970 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
CLN8-209ENST00000635970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.81■□□□□ 0.92
CLN8-209ENST00000635970 ABTB2Q8N961 1025 aa20.81■□□□□ 0.92
CLN8-209ENST00000635970 BRD4O60885 1362 aaPredicted RBP20.8■□□□□ 0.92
CLN8-209ENST00000635970 CCDC7Q96M83 1385 aa20.8■□□□□ 0.92
CLN8-209ENST00000635970 KIF20BQ96Q89 1820 aa20.79■□□□□ 0.92
CLN8-209ENST00000635970 BCL11AQ9H165 835 aa20.78■□□□□ 0.92
CLN8-209ENST00000635970 USP54Q70EL1 1684 aa20.77■□□□□ 0.92
CLN8-209ENST00000635970 TTC21AQ8NDW8 1320 aa20.77■□□□□ 0.92
CLN8-209ENST00000635970 NSD3Q9BZ95 1437 aa20.77■□□□□ 0.91
CLN8-209ENST00000635970 ADAMTS2O95450 1211 aa20.76■□□□□ 0.91
CLN8-209ENST00000635970 NME9Q86XW9 330 aa20.76■□□□□ 0.91
CLN8-209ENST00000635970 CARD14Q9BXL6 1004 aa20.76■□□□□ 0.91
CLN8-209ENST00000635970 ZRANB1Q9UGI0 708 aa20.76■□□□□ 0.91
CLN8-209ENST00000635970 HAP1P54257 671 aaPredicted RBP20.74■□□□□ 0.91
CLN8-209ENST00000635970 ZBED9Q6R2W3 1325 aa20.74■□□□□ 0.91
CLN8-209ENST00000635970 SLIT3O75094 1523 aa20.74■□□□□ 0.91
CLN8-209ENST00000635970 NLRP6P59044 892 aa20.74■□□□□ 0.91
CLN8-209ENST00000635970 MEX3CQ5U5Q3 659 aaKnown RBP20.74■□□□□ 0.91
CLN8-209ENST00000635970 USP19O94966 1318 aa20.73■□□□□ 0.91
CLN8-209ENST00000635970 MSH5O43196 834 aa20.73■□□□□ 0.91
CLN8-209ENST00000635970 PANK3Q9H999 370 aa20.73■□□□□ 0.91
CLN8-209ENST00000635970 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
CLN8-209ENST00000635970 PLCH1Q4KWH8 1693 aa20.72■□□□□ 0.91
CLN8-209ENST00000635970 NLRP13Q86W25 1043 aa20.72■□□□□ 0.91
CLN8-209ENST00000635970 C8orf37Q96NL8 207 aa20.71■□□□□ 0.91
CLN8-209ENST00000635970 OVOS2A0A0J9YW53 1432 aa20.71■□□□□ 0.91
CLN8-209ENST00000635970 OVOS2Q6IE36 1432 aa20.71■□□□□ 0.91
CLN8-209ENST00000635970 ERICH6Q7L0X2 663 aa20.7■□□□□ 0.9
CLN8-209ENST00000635970 USP31Q70CQ4 1352 aa20.69■□□□□ 0.9
CLN8-209ENST00000635970 ANKRD26Q9UPS8 1709 aa20.68■□□□□ 0.9
CLN8-209ENST00000635970 SOX12O15370 315 aa20.68■□□□□ 0.9
CLN8-209ENST00000635970 NFAT5O94916 1531 aa20.68■□□□□ 0.9
CLN8-209ENST00000635970 LTN1O94822 1766 aa20.67■□□□□ 0.9
CLN8-209ENST00000635970 GGNBP2Q9H3C7 697 aa20.67■□□□□ 0.9
CLN8-209ENST00000635970 FYB1O15117 783 aa20.66■□□□□ 0.9
CLN8-209ENST00000635970 GCP02774 474 aa20.66■□□□□ 0.9
CLN8-209ENST00000635970 ZC3H6P61129 1189 aaKnown RBP20.66■□□□□ 0.9
CLN8-209ENST00000635970 KIAA0232Q92628 1395 aa20.66■□□□□ 0.9
CLN8-209ENST00000635970 COL14A1Q05707 1796 aaKnown RBP20.66■□□□□ 0.9
CLN8-209ENST00000635970 PHF23Q9BUL5 403 aaPredicted RBP20.65■□□□□ 0.9
CLN8-209ENST00000635970 NGLY1Q96IV0 654 aa20.64■□□□□ 0.89
CLN8-209ENST00000635970 NWD2Q9ULI1 1742 aa20.64■□□□□ 0.89
CLN8-209ENST00000635970 AFF2P51816 1311 aa20.64■□□□□ 0.89
CLN8-209ENST00000635970 NRAPQ86VF7 1730 aa20.63■□□□□ 0.89
CLN8-209ENST00000635970 RGS17Q9UGC6 210 aaPredicted RBP20.63■□□□□ 0.89
CLN8-209ENST00000635970 RGPD5Q99666 1765 aa20.63■□□□□ 0.89
CLN8-209ENST00000635970 FAM83GA6ND36 823 aa20.63■□□□□ 0.89
CLN8-209ENST00000635970 CHRNA2Q15822 529 aa20.63■□□□□ 0.89
CLN8-209ENST00000635970 COG3Q96JB2 828 aa20.63■□□□□ 0.89
CLN8-209ENST00000635970 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
CLN8-209ENST00000635970 LMO7Q8WWI1 1683 aa20.62■□□□□ 0.89
CLN8-209ENST00000635970 CGNL1Q0VF96 1302 aa20.62■□□□□ 0.89
CLN8-209ENST00000635970 ZBTB7CA1YPR0 619 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms