RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 MARF1Q9Y4F3 1742 aaKnown RBP19.04■□□□□ 0.64
C11orf53-202ENST00000635886 QTRT2Q9H974 415 aaKnown RBP19.03■□□□□ 0.64
C11orf53-202ENST00000635886 ABCA3Q99758 1704 aa19.03■□□□□ 0.64
C11orf53-202ENST00000635886 RXRBP28702 533 aa19.02■□□□□ 0.64
C11orf53-202ENST00000635886 BCL9LQ86UU0 1499 aa19■□□□□ 0.63
C11orf53-202ENST00000635886 ATAD2Q6PL18 1390 aa18.99■□□□□ 0.63
C11orf53-202ENST00000635886 ST20-MTHFSA0A0A6YYL1 179 aa18.99■□□□□ 0.63
C11orf53-202ENST00000635886 RBM6P78332 1123 aaKnown RBP18.98■□□□□ 0.63
C11orf53-202ENST00000635886 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
C11orf53-202ENST00000635886 TRPC5Q9UL62 973 aaPredicted RBP18.98■□□□□ 0.63
C11orf53-202ENST00000635886 SLIT2O94813 1529 aa18.98■□□□□ 0.63
C11orf53-202ENST00000635886 TESK2Q96S53 571 aa18.97■□□□□ 0.63
C11orf53-202ENST00000635886 ATRNO75882 1429 aa18.97■□□□□ 0.63
C11orf53-202ENST00000635886 USP6P35125 1406 aa18.97■□□□□ 0.63
C11orf53-202ENST00000635886 CRYBG1Q9Y4K1 1723 aa18.97■□□□□ 0.63
C11orf53-202ENST00000635886 USP47Q96K76 1375 aa18.96■□□□□ 0.63
C11orf53-202ENST00000635886 ABTB2Q8N961 1025 aa18.96■□□□□ 0.63
C11orf53-202ENST00000635886 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
C11orf53-202ENST00000635886 FAM83GA6ND36 823 aa18.95■□□□□ 0.62
C11orf53-202ENST00000635886 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
C11orf53-202ENST00000635886 UNC5CLQ8IV45 518 aa18.94■□□□□ 0.62
C11orf53-202ENST00000635886 SSH2Q76I76 1423 aa18.93■□□□□ 0.62
C11orf53-202ENST00000635886 RGS12O14924 1447 aa18.92■□□□□ 0.62
C11orf53-202ENST00000635886 CPSF1Q10570 1443 aaKnown RBP18.92■□□□□ 0.62
C11orf53-202ENST00000635886 PLCH1Q4KWH8 1693 aa18.92■□□□□ 0.62
C11orf53-202ENST00000635886 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.92■□□□□ 0.62
C11orf53-202ENST00000635886 ZNF692Q9BU19 519 aaPredicted RBP18.92■□□□□ 0.62
C11orf53-202ENST00000635886 PHRF1Q9P1Y6 1649 aaKnown RBP18.92■□□□□ 0.62
C11orf53-202ENST00000635886 TMC1Q8TDI8 760 aa18.91■□□□□ 0.62
C11orf53-202ENST00000635886 PUS7Q96PZ0 661 aaKnown RBP18.91■□□□□ 0.62
C11orf53-202ENST00000635886 USP19O94966 1318 aa18.91■□□□□ 0.62
C11orf53-202ENST00000635886 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
C11orf53-202ENST00000635886 NLRP13Q86W25 1043 aa18.9■□□□□ 0.62
C11orf53-202ENST00000635886 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
C11orf53-202ENST00000635886 PRDM11Q9NQV5 511 aa18.9■□□□□ 0.62
C11orf53-202ENST00000635886 NWD2Q9ULI1 1742 aa18.9■□□□□ 0.62
C11orf53-202ENST00000635886 KIAA0232Q92628 1395 aa18.9■□□□□ 0.62
C11orf53-202ENST00000635886 COL14A1Q05707 1796 aaKnown RBP18.89■□□□□ 0.61
C11orf53-202ENST00000635886 SLC24A1O60721 1099 aa18.89■□□□□ 0.61
C11orf53-202ENST00000635886 SLC12A5Q9H2X9 1139 aa18.89■□□□□ 0.61
C11orf53-202ENST00000635886 BTG4Q9NY30 223 aa18.89■□□□□ 0.61
C11orf53-202ENST00000635886 TTC21BQ7Z4L5 1316 aa18.89■□□□□ 0.61
C11orf53-202ENST00000635886 KTN1Q86UP2 1357 aaKnown RBP18.89■□□□□ 0.61
C11orf53-202ENST00000635886 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.61
C11orf53-202ENST00000635886 NLRP6P59044 892 aa18.88■□□□□ 0.61
C11orf53-202ENST00000635886 ZC3H6P61129 1189 aaKnown RBP18.88■□□□□ 0.61
C11orf53-202ENST00000635886 NRKQ7Z2Y5 1582 aa18.88■□□□□ 0.61
C11orf53-202ENST00000635886 PIK3C2AO00443 1686 aa18.87■□□□□ 0.61
C11orf53-202ENST00000635886 VPS72Q15906 364 aa18.87■□□□□ 0.61
C11orf53-202ENST00000635886 GLI3P10071 1580 aa18.86■□□□□ 0.61
C11orf53-202ENST00000635886 TMF1P82094 1093 aa18.86■□□□□ 0.61
C11orf53-202ENST00000635886 CHRNA2Q15822 529 aa18.86■□□□□ 0.61
C11orf53-202ENST00000635886 MON2Q7Z3U7 1717 aa18.86■□□□□ 0.61
C11orf53-202ENST00000635886 NRAPQ86VF7 1730 aa18.86■□□□□ 0.61
C11orf53-202ENST00000635886 TTC21AQ8NDW8 1320 aa18.85■□□□□ 0.61
C11orf53-202ENST00000635886 GCP02774 474 aa18.85■□□□□ 0.61
C11orf53-202ENST00000635886 HDGFL2Q7Z4V5 671 aaPredicted RBP18.84■□□□□ 0.61
C11orf53-202ENST00000635886 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
C11orf53-202ENST00000635886 SLIT3O75094 1523 aa18.84■□□□□ 0.61
C11orf53-202ENST00000635886 A0A1W2PP64 1363 aa18.83■□□□□ 0.61
C11orf53-202ENST00000635886 CPDO75976 1380 aa18.83■□□□□ 0.61
C11orf53-202ENST00000635886 TERF2IPQ9NYB0 399 aa18.83■□□□□ 0.6
C11orf53-202ENST00000635886 NINLQ9Y2I6 1382 aa18.82■□□□□ 0.6
C11orf53-202ENST00000635886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.82■□□□□ 0.6
C11orf53-202ENST00000635886 ZRANB1Q9UGI0 708 aa18.8■□□□□ 0.6
C11orf53-202ENST00000635886 EDC4Q6P2E9 1401 aaKnown RBP18.8■□□□□ 0.6
C11orf53-202ENST00000635886 NME9Q86XW9 330 aa18.79■□□□□ 0.6
C11orf53-202ENST00000635886 STRN4Q9NRL3 753 aa18.79■□□□□ 0.6
C11orf53-202ENST00000635886 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
C11orf53-202ENST00000635886 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
C11orf53-202ENST00000635886 UPF1Q92900 1129 aaKnown RBP eCLIP18.78■□□□□ 0.6
C11orf53-202ENST00000635886 LMO7Q8WWI1 1683 aa18.78■□□□□ 0.6
C11orf53-202ENST00000635886 CAMTA1Q9Y6Y1 1673 aa18.78■□□□□ 0.6
C11orf53-202ENST00000635886 USP31Q70CQ4 1352 aa18.78■□□□□ 0.6
C11orf53-202ENST00000635886 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.6
C11orf53-202ENST00000635886 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.6
C11orf53-202ENST00000635886 SOX12O15370 315 aa18.77■□□□□ 0.6
C11orf53-202ENST00000635886 EIF4G2P78344 907 aaKnown RBP eCLIP18.77■□□□□ 0.6
C11orf53-202ENST00000635886 SEPT12Q8IYM1 358 aa18.77■□□□□ 0.6
C11orf53-202ENST00000635886 KCNH5Q8NCM2 988 aa18.77■□□□□ 0.6
C11orf53-202ENST00000635886 ONECUT3O60422 494 aaPredicted RBP18.76■□□□□ 0.59
C11orf53-202ENST00000635886 HSPA5P11021 654 aaKnown RBP18.76■□□□□ 0.59
C11orf53-202ENST00000635886 ANKRD36BQ8N2N9 1353 aa18.76■□□□□ 0.59
C11orf53-202ENST00000635886 EVA1CP58658 441 aa18.75■□□□□ 0.59
C11orf53-202ENST00000635886 FAM98CQ17RN3 349 aaKnown RBP18.75■□□□□ 0.59
C11orf53-202ENST00000635886 AATKQ6ZMQ8 1374 aa18.75■□□□□ 0.59
C11orf53-202ENST00000635886 ARHGEF25Q86VW2 580 aa18.74■□□□□ 0.59
C11orf53-202ENST00000635886 NFAT5O94916 1531 aa18.74■□□□□ 0.59
C11orf53-202ENST00000635886 SPATA31A1Q5TZJ5 1347 aa18.74■□□□□ 0.59
C11orf53-202ENST00000635886 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
C11orf53-202ENST00000635886 COL5A2P05997 1499 aaPredicted RBP18.73■□□□□ 0.59
C11orf53-202ENST00000635886 LARP1Q6PKG0 1096 aaKnown RBP18.73■□□□□ 0.59
C11orf53-202ENST00000635886 A0A0G2JS52 829 aa18.72■□□□□ 0.59
C11orf53-202ENST00000635886 MYT1Q01538 1121 aa18.72■□□□□ 0.59
C11orf53-202ENST00000635886 OVOS2A0A0J9YW53 1432 aa18.72■□□□□ 0.59
C11orf53-202ENST00000635886 OVOS2Q6IE36 1432 aa18.72■□□□□ 0.59
C11orf53-202ENST00000635886 COL18A1P39060 1754 aa18.71■□□□□ 0.59
C11orf53-202ENST00000635886 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
C11orf53-202ENST00000635886 BRWD3Q6RI45 1802 aa18.71■□□□□ 0.59
C11orf53-202ENST00000635886 AXIN2Q9Y2T1 843 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms