RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1A-216ENST00000635742 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
CACNA1A-216ENST00000635742 COL3A1P02461 1466 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-216ENST00000635742 MTHFSP49914 203 aa13.37□□□□□ -0.27
CACNA1A-216ENST00000635742 PMFBP1Q8TBY8 1022 aa13.37□□□□□ -0.27
CACNA1A-216ENST00000635742 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-216ENST00000635742 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
CACNA1A-216ENST00000635742 GTF3C3Q9Y5Q9 886 aa13.37□□□□□ -0.27
CACNA1A-216ENST00000635742 SSH2Q76I76 1423 aa13.36□□□□□ -0.27
CACNA1A-216ENST00000635742 TTC21BQ7Z4L5 1316 aa13.35□□□□□ -0.27
CACNA1A-216ENST00000635742 MAP2P11137 1827 aaKnown RBP13.35□□□□□ -0.27
CACNA1A-216ENST00000635742 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
CACNA1A-216ENST00000635742 OVOS2A0A0J9YW53 1432 aa13.34□□□□□ -0.27
CACNA1A-216ENST00000635742 OVOS2Q6IE36 1432 aa13.34□□□□□ -0.27
CACNA1A-216ENST00000635742 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-216ENST00000635742 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
CACNA1A-216ENST00000635742 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-216ENST00000635742 FBLN1P23142 703 aa13.33□□□□□ -0.28
CACNA1A-216ENST00000635742 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-216ENST00000635742 SMG6Q86US8 1419 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-216ENST00000635742 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-216ENST00000635742 MARF1Q9Y4F3 1742 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-216ENST00000635742 CFAP53Q96M91 514 aa13.32□□□□□ -0.28
CACNA1A-216ENST00000635742 COG3Q96JB2 828 aa13.31□□□□□ -0.28
CACNA1A-216ENST00000635742 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-216ENST00000635742 TMEM94Q12767 1356 aa13.31□□□□□ -0.28
CACNA1A-216ENST00000635742 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
CACNA1A-216ENST00000635742 USP54Q70EL1 1684 aa13.31□□□□□ -0.28
CACNA1A-216ENST00000635742 AATKQ6ZMQ8 1374 aa13.3□□□□□ -0.28
CACNA1A-216ENST00000635742 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
CACNA1A-216ENST00000635742 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
CACNA1A-216ENST00000635742 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
CACNA1A-216ENST00000635742 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-216ENST00000635742 POLKQ9UBT6 870 aa13.29□□□□□ -0.28
CACNA1A-216ENST00000635742 EMILIN1Q9Y6C2 1016 aa13.29□□□□□ -0.28
CACNA1A-216ENST00000635742 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
CACNA1A-216ENST00000635742 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
CACNA1A-216ENST00000635742 PEAK1Q9H792 1746 aa13.28□□□□□ -0.28
CACNA1A-216ENST00000635742 NCOA3Q9Y6Q9 1424 aa13.27□□□□□ -0.28
CACNA1A-216ENST00000635742 USP31Q70CQ4 1352 aa13.27□□□□□ -0.28
CACNA1A-216ENST00000635742 C1orf167Q5SNV9 1468 aa13.27□□□□□ -0.28
CACNA1A-216ENST00000635742 DCCP43146 1447 aa13.27□□□□□ -0.29
CACNA1A-216ENST00000635742 MST1RQ04912 1400 aa13.27□□□□□ -0.29
CACNA1A-216ENST00000635742 ESCO1Q5FWF5 840 aa13.27□□□□□ -0.29
CACNA1A-216ENST00000635742 C19orf44Q9H6X5 657 aa13.27□□□□□ -0.29
CACNA1A-216ENST00000635742 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
CACNA1A-216ENST00000635742 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-216ENST00000635742 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
CACNA1A-216ENST00000635742 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
CACNA1A-216ENST00000635742 APAF1O14727 1248 aa13.25□□□□□ -0.29
CACNA1A-216ENST00000635742 PPM1GO15355 546 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-216ENST00000635742 ZNF335Q9H4Z2 1342 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-216ENST00000635742 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-216ENST00000635742 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-216ENST00000635742 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-216ENST00000635742 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
CACNA1A-216ENST00000635742 ZNF521Q96K83 1311 aa13.24□□□□□ -0.29
CACNA1A-216ENST00000635742 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-216ENST00000635742 RUNDC1Q96C34 613 aa13.23□□□□□ -0.29
CACNA1A-216ENST00000635742 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
CACNA1A-216ENST00000635742 MSH6P52701 1360 aa13.22□□□□□ -0.29
CACNA1A-216ENST00000635742 SOX12O15370 315 aa13.22□□□□□ -0.29
CACNA1A-216ENST00000635742 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-216ENST00000635742 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
CACNA1A-216ENST00000635742 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-216ENST00000635742 ATF3P18847 181 aa13.21□□□□□ -0.29
CACNA1A-216ENST00000635742 NLRP6P59044 892 aa13.21□□□□□ -0.29
CACNA1A-216ENST00000635742 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
CACNA1A-216ENST00000635742 FOXO3O43524 673 aa13.2□□□□□ -0.3
CACNA1A-216ENST00000635742 IL13P35225 146 aa13.2□□□□□ -0.3
CACNA1A-216ENST00000635742 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-216ENST00000635742 PSME1Q06323 249 aa13.2□□□□□ -0.3
CACNA1A-216ENST00000635742 ABTB2Q8N961 1025 aa13.2□□□□□ -0.3
CACNA1A-216ENST00000635742 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
CACNA1A-216ENST00000635742 RGPD1P0DJD0 1748 aa13.2□□□□□ -0.3
CACNA1A-216ENST00000635742 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
CACNA1A-216ENST00000635742 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
CACNA1A-216ENST00000635742 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-216ENST00000635742 LTN1O94822 1766 aa13.19□□□□□ -0.3
CACNA1A-216ENST00000635742 NFAT5O94916 1531 aa13.19□□□□□ -0.3
CACNA1A-216ENST00000635742 ALS2Q96Q42 1657 aa13.19□□□□□ -0.3
CACNA1A-216ENST00000635742 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
CACNA1A-216ENST00000635742 SBNO1A3KN83 1393 aa13.17□□□□□ -0.3
CACNA1A-216ENST00000635742 SLIT3O75094 1523 aa13.17□□□□□ -0.3
CACNA1A-216ENST00000635742 FLT4P35916 1363 aa13.17□□□□□ -0.3
CACNA1A-216ENST00000635742 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
CACNA1A-216ENST00000635742 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
CACNA1A-216ENST00000635742 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
CACNA1A-216ENST00000635742 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
CACNA1A-216ENST00000635742 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-216ENST00000635742 FKBP8Q14318 412 aa13.16□□□□□ -0.3
CACNA1A-216ENST00000635742 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
CACNA1A-216ENST00000635742 HSP90AB2PQ58FF8 381 aa13.16□□□□□ -0.3
CACNA1A-216ENST00000635742 NEFLP07196 543 aa13.15□□□□□ -0.3
CACNA1A-216ENST00000635742 HMOX1P09601 288 aa13.15□□□□□ -0.3
CACNA1A-216ENST00000635742 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
CACNA1A-216ENST00000635742 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
CACNA1A-216ENST00000635742 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-216ENST00000635742 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-216ENST00000635742 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms