RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
PTPN11-206ENST00000635652 ATP7BP35670 1465 aa18.22■□□□□ 0.51
PTPN11-206ENST00000635652 A0A0G2JS52 829 aa18.22■□□□□ 0.51
PTPN11-206ENST00000635652 MYT1Q01538 1121 aa18.22■□□□□ 0.51
PTPN11-206ENST00000635652 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
PTPN11-206ENST00000635652 ONECUT3O60422 494 aaPredicted RBP18.19■□□□□ 0.5
PTPN11-206ENST00000635652 COL14A1Q05707 1796 aaKnown RBP18.19■□□□□ 0.5
PTPN11-206ENST00000635652 ACEP12821 1306 aa18.19■□□□□ 0.5
PTPN11-206ENST00000635652 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
PTPN11-206ENST00000635652 FAM98CQ17RN3 349 aaKnown RBP18.18■□□□□ 0.5
PTPN11-206ENST00000635652 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
PTPN11-206ENST00000635652 NUTM2GQ5VZR2 741 aa18.18■□□□□ 0.5
PTPN11-206ENST00000635652 KRT27Q7Z3Y8 459 aa18.18■□□□□ 0.5
PTPN11-206ENST00000635652 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
PTPN11-206ENST00000635652 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
PTPN11-206ENST00000635652 L3MBTL2Q969R5 705 aa18.17■□□□□ 0.5
PTPN11-206ENST00000635652 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
PTPN11-206ENST00000635652 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
PTPN11-206ENST00000635652 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
PTPN11-206ENST00000635652 PLEKHG3A1L390 1219 aa18.16■□□□□ 0.5
PTPN11-206ENST00000635652 SF3B2Q13435 895 aaKnown RBP18.16■□□□□ 0.5
PTPN11-206ENST00000635652 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
PTPN11-206ENST00000635652 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
PTPN11-206ENST00000635652 CABP2Q9NPB3 220 aa18.15■□□□□ 0.5
PTPN11-206ENST00000635652 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
PTPN11-206ENST00000635652 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
PTPN11-206ENST00000635652 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
PTPN11-206ENST00000635652 CHRNA2Q15822 529 aa18.14■□□□□ 0.49
PTPN11-206ENST00000635652 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
PTPN11-206ENST00000635652 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
PTPN11-206ENST00000635652 KIAA0232Q92628 1395 aa18.14■□□□□ 0.49
PTPN11-206ENST00000635652 DEFB132Q7Z7B7 95 aa18.12■□□□□ 0.49
PTPN11-206ENST00000635652 SPATA31A5Q5VU36 1347 aa18.12■□□□□ 0.49
PTPN11-206ENST00000635652 SPATA31A7Q8IWB4 1347 aa18.12■□□□□ 0.49
PTPN11-206ENST00000635652 PPIP5K1Q6PFW1 1433 aa18.12■□□□□ 0.49
PTPN11-206ENST00000635652 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
PTPN11-206ENST00000635652 QRICH2Q9H0J4 1663 aa18.11■□□□□ 0.49
PTPN11-206ENST00000635652 PHRF1Q9P1Y6 1649 aaKnown RBP18.1■□□□□ 0.49
PTPN11-206ENST00000635652 EVA1CP58658 441 aa18.09■□□□□ 0.49
PTPN11-206ENST00000635652 CABP1Q9NZU7 370 aa18.08■□□□□ 0.48
PTPN11-206ENST00000635652 FAM182BQ5T319 152 aa18.07■□□□□ 0.48
PTPN11-206ENST00000635652 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
PTPN11-206ENST00000635652 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
PTPN11-206ENST00000635652 ROCK2O75116 1388 aaKnown RBP18.06■□□□□ 0.48
PTPN11-206ENST00000635652 SPATA31A1Q5TZJ5 1347 aa18.06■□□□□ 0.48
PTPN11-206ENST00000635652 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
PTPN11-206ENST00000635652 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
PTPN11-206ENST00000635652 GCP02774 474 aa18.04■□□□□ 0.48
PTPN11-206ENST00000635652 BAG6P46379 1132 aa18.04■□□□□ 0.48
PTPN11-206ENST00000635652 USP19O94966 1318 aa18.03■□□□□ 0.48
PTPN11-206ENST00000635652 ZBTB7CA1YPR0 619 aa18.03■□□□□ 0.48
PTPN11-206ENST00000635652 NLRP6P59044 892 aa18.03■□□□□ 0.48
PTPN11-206ENST00000635652 NRKQ7Z2Y5 1582 aa18.03■□□□□ 0.48
PTPN11-206ENST00000635652 LARP1Q6PKG0 1096 aaKnown RBP18.02■□□□□ 0.48
PTPN11-206ENST00000635652 THSD7AQ9UPZ6 1657 aa18.02■□□□□ 0.47
PTPN11-206ENST00000635652 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.47
PTPN11-206ENST00000635652 USP6P35125 1406 aa18.01■□□□□ 0.47
PTPN11-206ENST00000635652 SSH2Q76I76 1423 aa18.01■□□□□ 0.47
PTPN11-206ENST00000635652 CPDO75976 1380 aa18.01■□□□□ 0.47
PTPN11-206ENST00000635652 CAMTA1Q9Y6Y1 1673 aa18■□□□□ 0.47
PTPN11-206ENST00000635652 EN1Q05925 392 aaPredicted RBP17.99■□□□□ 0.47
PTPN11-206ENST00000635652 RGPD1P0DJD0 1748 aa17.98■□□□□ 0.47
PTPN11-206ENST00000635652 PDE3BQ13370 1112 aa17.98■□□□□ 0.47
PTPN11-206ENST00000635652 FAM196AQ6ZSG2 479 aa17.98■□□□□ 0.47
PTPN11-206ENST00000635652 BARGINQ6ZT62 677 aa17.98■□□□□ 0.47
PTPN11-206ENST00000635652 TCP11L2Q8N4U5 519 aa17.98■□□□□ 0.47
PTPN11-206ENST00000635652 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
PTPN11-206ENST00000635652 LMO7Q8WWI1 1683 aa17.96■□□□□ 0.47
PTPN11-206ENST00000635652 TRIM37O94972 964 aa17.96■□□□□ 0.47
PTPN11-206ENST00000635652 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.47
PTPN11-206ENST00000635652 PSDA5PKW4 1024 aaPredicted RBP17.95■□□□□ 0.46
PTPN11-206ENST00000635652 TTC21BQ7Z4L5 1316 aa17.95■□□□□ 0.46
PTPN11-206ENST00000635652 THRAP3Q9Y2W1 955 aaKnown RBP17.94■□□□□ 0.46
PTPN11-206ENST00000635652 COL5A2P05997 1499 aaPredicted RBP17.94■□□□□ 0.46
PTPN11-206ENST00000635652 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
PTPN11-206ENST00000635652 TONSLQ96HA7 1378 aa17.93■□□□□ 0.46
PTPN11-206ENST00000635652 SOX12O15370 315 aa17.93■□□□□ 0.46
PTPN11-206ENST00000635652 AATKQ6ZMQ8 1374 aa17.92■□□□□ 0.46
PTPN11-206ENST00000635652 APBA3O96018 575 aa17.92■□□□□ 0.46
PTPN11-206ENST00000635652 EZH2Q15910 746 aaKnown RBP17.92■□□□□ 0.46
PTPN11-206ENST00000635652 SLIT3O75094 1523 aa17.92■□□□□ 0.46
PTPN11-206ENST00000635652 TNS1Q9HBL0 1735 aaKnown RBP17.92■□□□□ 0.46
PTPN11-206ENST00000635652 KTN1Q86UP2 1357 aaKnown RBP17.91■□□□□ 0.46
PTPN11-206ENST00000635652 AKAP12Q02952 1782 aa17.91■□□□□ 0.46
PTPN11-206ENST00000635652 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
PTPN11-206ENST00000635652 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
PTPN11-206ENST00000635652 CRB1P82279 1406 aa17.9■□□□□ 0.46
PTPN11-206ENST00000635652 TTC21AQ8NDW8 1320 aa17.9■□□□□ 0.46
PTPN11-206ENST00000635652 DISP2A7MBM2 1401 aa17.89■□□□□ 0.46
PTPN11-206ENST00000635652 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
PTPN11-206ENST00000635652 AXIN2Q9Y2T1 843 aa17.89■□□□□ 0.45
PTPN11-206ENST00000635652 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.45
PTPN11-206ENST00000635652 R3HDM1Q15032 1099 aaKnown RBP17.88■□□□□ 0.45
PTPN11-206ENST00000635652 ARHGEF25Q86VW2 580 aa17.88■□□□□ 0.45
PTPN11-206ENST00000635652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTPN11-206ENST00000635652 CAMKK2Q96RR4 588 aa17.88■□□□□ 0.45
PTPN11-206ENST00000635652 SBNO2Q9Y2G9 1366 aa17.87■□□□□ 0.45
PTPN11-206ENST00000635652 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
PTPN11-206ENST00000635652 COL18A1P39060 1754 aa17.86■□□□□ 0.45
PTPN11-206ENST00000635652 CSB-PGBD3P0DP91 1061 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms