RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 FAM69CQ0P6D2 419 aa18.11■□□□□ 0.49
PTBP1-221ENST00000635647 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
PTBP1-221ENST00000635647 ZNF428Q96B54 188 aa18.11■□□□□ 0.49
PTBP1-221ENST00000635647 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
PTBP1-221ENST00000635647 NUTM2GQ5VZR2 741 aa18.11■□□□□ 0.49
PTBP1-221ENST00000635647 NPATQ14207 1427 aa18.11■□□□□ 0.49
PTBP1-221ENST00000635647 A0A0U1RQG5 324 aaPredicted RBP18.11■□□□□ 0.49
PTBP1-221ENST00000635647 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
PTBP1-221ENST00000635647 RRS1Q15050 365 aaKnown RBP18.11■□□□□ 0.49
PTBP1-221ENST00000635647 GOLGA6L3A6NEY3 463 aa18.09■□□□□ 0.49
PTBP1-221ENST00000635647 IQGAP1P46940 1657 aa18.08■□□□□ 0.49
PTBP1-221ENST00000635647 RNF17Q9BXT8 1623 aaKnown RBP18.08■□□□□ 0.49
PTBP1-221ENST00000635647 TBC1D32Q96NH3 1257 aa18.08■□□□□ 0.49
PTBP1-221ENST00000635647 USP19O94966 1318 aa18.08■□□□□ 0.49
PTBP1-221ENST00000635647 A0A1W2PP64 1363 aa18.08■□□□□ 0.48
PTBP1-221ENST00000635647 ANKRD36BQ8N2N9 1353 aa18.08■□□□□ 0.48
PTBP1-221ENST00000635647 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
PTBP1-221ENST00000635647 TET3O43151 1660 aa18.07■□□□□ 0.48
PTBP1-221ENST00000635647 FOXD4L6Q3SYB3 417 aaPredicted RBP18.07■□□□□ 0.48
PTBP1-221ENST00000635647 FOXD4L3Q6VB84 417 aaPredicted RBP18.07■□□□□ 0.48
PTBP1-221ENST00000635647 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
PTBP1-221ENST00000635647 AAMPQ13685 434 aa18.07■□□□□ 0.48
PTBP1-221ENST00000635647 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
PTBP1-221ENST00000635647 ABCA6Q8N139 1617 aa18.06■□□□□ 0.48
PTBP1-221ENST00000635647 MAP3K4Q9Y6R4 1608 aa18.06■□□□□ 0.48
PTBP1-221ENST00000635647 CCDC27Q2M243 656 aa18.05■□□□□ 0.48
PTBP1-221ENST00000635647 RRAGDQ9NQL2 400 aaPredicted RBP18.05■□□□□ 0.48
PTBP1-221ENST00000635647 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
PTBP1-221ENST00000635647 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
PTBP1-221ENST00000635647 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
PTBP1-221ENST00000635647 MYOM2P54296 1465 aa18.04■□□□□ 0.48
PTBP1-221ENST00000635647 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
PTBP1-221ENST00000635647 SHROOM2Q13796 1616 aa18.03■□□□□ 0.48
PTBP1-221ENST00000635647 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
PTBP1-221ENST00000635647 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
PTBP1-221ENST00000635647 CEP152O94986 1710 aa18.02■□□□□ 0.48
PTBP1-221ENST00000635647 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.48
PTBP1-221ENST00000635647 KIF1BO60333 1816 aa18.02■□□□□ 0.48
PTBP1-221ENST00000635647 PHACTR3Q96KR7 559 aa18.01■□□□□ 0.47
PTBP1-221ENST00000635647 CHMP5Q9NZZ3 219 aa18.01■□□□□ 0.47
PTBP1-221ENST00000635647 NME9Q86XW9 330 aa18.01■□□□□ 0.47
PTBP1-221ENST00000635647 COG3Q96JB2 828 aa18.01■□□□□ 0.47
PTBP1-221ENST00000635647 PODXL2Q9NZ53 605 aa18.01■□□□□ 0.47
PTBP1-221ENST00000635647 FAM83GA6ND36 823 aa18■□□□□ 0.47
PTBP1-221ENST00000635647 TSPYL6Q8N831 410 aa18■□□□□ 0.47
PTBP1-221ENST00000635647 CHD1LQ86WJ1 897 aa18■□□□□ 0.47
PTBP1-221ENST00000635647 CT47B1P0C2W7 299 aaPredicted RBP17.99■□□□□ 0.47
PTBP1-221ENST00000635647 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
PTBP1-221ENST00000635647 EFCAB6Q5THR3 1501 aa17.99■□□□□ 0.47
PTBP1-221ENST00000635647 ATAD2Q6PL18 1390 aa17.99■□□□□ 0.47
PTBP1-221ENST00000635647 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
PTBP1-221ENST00000635647 FCHSD2O94868 740 aa17.98■□□□□ 0.47
PTBP1-221ENST00000635647 ANP32BQ92688 251 aaKnown RBP17.98■□□□□ 0.47
PTBP1-221ENST00000635647 PANK2Q9BZ23 570 aa17.98■□□□□ 0.47
PTBP1-221ENST00000635647 TWISTNBQ3B726 338 aaPredicted RBP17.98■□□□□ 0.47
PTBP1-221ENST00000635647 TAOK2Q9UL54 1235 aa17.98■□□□□ 0.47
PTBP1-221ENST00000635647 MCM4P33991 863 aa17.97■□□□□ 0.47
PTBP1-221ENST00000635647 TRAK2O60296 914 aa17.97■□□□□ 0.47
PTBP1-221ENST00000635647 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
PTBP1-221ENST00000635647 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
PTBP1-221ENST00000635647 CALD1Q05682 793 aaKnown RBP17.97■□□□□ 0.47
PTBP1-221ENST00000635647 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
PTBP1-221ENST00000635647 MYOM1P52179 1685 aa17.97■□□□□ 0.47
PTBP1-221ENST00000635647 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
PTBP1-221ENST00000635647 NSD2O96028 1365 aa17.96■□□□□ 0.47
PTBP1-221ENST00000635647 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
PTBP1-221ENST00000635647 GNAI1P63096 354 aa17.96■□□□□ 0.47
PTBP1-221ENST00000635647 POLKQ9UBT6 870 aa17.96■□□□□ 0.47
PTBP1-221ENST00000635647 ZBTB40Q9NUA8 1239 aa17.95■□□□□ 0.46
PTBP1-221ENST00000635647 CHMP4BQ9H444 224 aaKnown RBP17.95■□□□□ 0.46
PTBP1-221ENST00000635647 HDAC1Q13547 482 aaPredicted RBP17.95■□□□□ 0.46
PTBP1-221ENST00000635647 AMPHP49418 695 aa17.94■□□□□ 0.46
PTBP1-221ENST00000635647 NFE2L2Q16236 605 aa17.94■□□□□ 0.46
PTBP1-221ENST00000635647 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
PTBP1-221ENST00000635647 RBM10P98175 930 aaKnown RBP17.94■□□□□ 0.46
PTBP1-221ENST00000635647 PPRC1Q5VV67 1664 aaKnown RBP17.94■□□□□ 0.46
PTBP1-221ENST00000635647 TRIM6-TRIM34B2RNG4 842 aa17.93■□□□□ 0.46
PTBP1-221ENST00000635647 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
PTBP1-221ENST00000635647 POGZQ7Z3K3 1410 aa17.92■□□□□ 0.46
PTBP1-221ENST00000635647 MCM10Q7L590 875 aa17.92■□□□□ 0.46
PTBP1-221ENST00000635647 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
PTBP1-221ENST00000635647 RBM42Q9BTD8 480 aaKnown RBP17.92■□□□□ 0.46
PTBP1-221ENST00000635647 INO80Q9ULG1 1556 aaPredicted RBP17.91■□□□□ 0.46
PTBP1-221ENST00000635647 SMC5Q8IY18 1101 aa17.91■□□□□ 0.46
PTBP1-221ENST00000635647 GOLGA6L22H0YM25 854 aa17.91■□□□□ 0.46
PTBP1-221ENST00000635647 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
PTBP1-221ENST00000635647 NUCB1Q02818 461 aa17.91■□□□□ 0.46
PTBP1-221ENST00000635647 MROH2AA6NES4 1674 aa17.9■□□□□ 0.46
PTBP1-221ENST00000635647 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
PTBP1-221ENST00000635647 PLCB2Q00722 1185 aa17.9■□□□□ 0.46
PTBP1-221ENST00000635647 C8orf58Q8NAV2 365 aa17.9■□□□□ 0.46
PTBP1-221ENST00000635647 EIF2S2P20042 333 aaKnown RBP17.9■□□□□ 0.46
PTBP1-221ENST00000635647 OS9Q13438 667 aaPredicted RBP17.9■□□□□ 0.46
PTBP1-221ENST00000635647 GBP4Q96PP9 640 aa17.9■□□□□ 0.46
PTBP1-221ENST00000635647 FAM13BQ9NYF5 915 aa17.9■□□□□ 0.46
PTBP1-221ENST00000635647 RILPL2Q969X0 211 aa17.89■□□□□ 0.45
PTBP1-221ENST00000635647 VAMP4O75379 141 aa17.89■□□□□ 0.45
PTBP1-221ENST00000635647 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
PTBP1-221ENST00000635647 ALDH1L2Q3SY69 923 aa17.89■□□□□ 0.45
PTBP1-221ENST00000635647 ARAP3Q8WWN8 1544 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms