RNA–Protein interactions for RNA: ENST00000635530.1

SMARCA2-242, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-242ENST00000635530 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
SMARCA2-242ENST00000635530 ITGBL1O95965 494 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-242ENST00000635530 KCNH2Q12809 1159 aa12.67□□□□□ -0.38
SMARCA2-242ENST00000635530 CTHP32929 405 aa12.66□□□□□ -0.38
SMARCA2-242ENST00000635530 GLMNQ92990 594 aa12.66□□□□□ -0.38
SMARCA2-242ENST00000635530 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
SMARCA2-242ENST00000635530 S1PR4O95977 384 aa12.65□□□□□ -0.38
SMARCA2-242ENST00000635530 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
SMARCA2-242ENST00000635530 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
SMARCA2-242ENST00000635530 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
SMARCA2-242ENST00000635530 ALG2Q9H553 416 aa12.62□□□□□ -0.39
SMARCA2-242ENST00000635530 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
SMARCA2-242ENST00000635530 NR1H3Q13133 447 aa12.6□□□□□ -0.39
SMARCA2-242ENST00000635530 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
SMARCA2-242ENST00000635530 OCSTAMPQ9BR26 566 aa12.6□□□□□ -0.39
SMARCA2-242ENST00000635530 UNC93B1Q9H1C4 597 aa12.6□□□□□ -0.39
SMARCA2-242ENST00000635530 ZBBXA8MT70 800 aa12.59□□□□□ -0.39
SMARCA2-242ENST00000635530 KCNC4Q03721 635 aa12.59□□□□□ -0.39
SMARCA2-242ENST00000635530 CCDC97Q96F63 343 aaPredicted RBP12.59□□□□□ -0.39
SMARCA2-242ENST00000635530 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
SMARCA2-242ENST00000635530 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
SMARCA2-242ENST00000635530 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.4
SMARCA2-242ENST00000635530 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
SMARCA2-242ENST00000635530 CCDC24Q8N4L8 307 aa12.57□□□□□ -0.4
SMARCA2-242ENST00000635530 ARMC2Q8NEN0 867 aa12.57□□□□□ -0.4
SMARCA2-242ENST00000635530 SOX11P35716 441 aa12.56□□□□□ -0.4
SMARCA2-242ENST00000635530 HOMEZQ8IX15 550 aa12.56□□□□□ -0.4
SMARCA2-242ENST00000635530 MMRN1Q13201 1228 aa12.55□□□□□ -0.4
SMARCA2-242ENST00000635530 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
SMARCA2-242ENST00000635530 GPSM3Q9Y4H4 160 aa12.55□□□□□ -0.4
SMARCA2-242ENST00000635530 PPEF1O14829 653 aaPredicted RBP12.54□□□□□ -0.4
SMARCA2-242ENST00000635530 UCN2Q96RP3 112 aa12.54□□□□□ -0.4
SMARCA2-242ENST00000635530 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
SMARCA2-242ENST00000635530 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
SMARCA2-242ENST00000635530 EIF4G2P78344 907 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCA2-242ENST00000635530 PLA2G2CQ5R387 149 aa12.51□□□□□ -0.41
SMARCA2-242ENST00000635530 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
SMARCA2-242ENST00000635530 PTK2Q05397 1052 aa12.5□□□□□ -0.41
SMARCA2-242ENST00000635530 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
SMARCA2-242ENST00000635530 SEMA3FQ13275 785 aa12.48□□□□□ -0.41
SMARCA2-242ENST00000635530 CFAP70Q5T0N1 1121 aa12.48□□□□□ -0.41
SMARCA2-242ENST00000635530 BAP1Q92560 729 aa12.48□□□□□ -0.41
SMARCA2-242ENST00000635530 LINC01559Q495D7 138 aa12.47□□□□□ -0.41
SMARCA2-242ENST00000635530 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
SMARCA2-242ENST00000635530 ZNF511Q8NB15 262 aa12.47□□□□□ -0.41
SMARCA2-242ENST00000635530 ADAM32Q8TC27 787 aa12.47□□□□□ -0.41
SMARCA2-242ENST00000635530 ARHGAP9Q9BRR9 750 aa12.47□□□□□ -0.41
SMARCA2-242ENST00000635530 C4orf48Q5BLP8 95 aa12.46□□□□□ -0.41
SMARCA2-242ENST00000635530 FOXJ1Q92949 421 aa12.46□□□□□ -0.41
SMARCA2-242ENST00000635530 PPP1R12CQ9BZL4 782 aa12.46□□□□□ -0.41
SMARCA2-242ENST00000635530 IFFO2Q5TF58 517 aa12.44□□□□□ -0.42
SMARCA2-242ENST00000635530 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.44□□□□□ -0.42
SMARCA2-242ENST00000635530 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
SMARCA2-242ENST00000635530 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
SMARCA2-242ENST00000635530 GGCXP38435 758 aa12.43□□□□□ -0.42
SMARCA2-242ENST00000635530 SH3BP2P78314 561 aa12.43□□□□□ -0.42
SMARCA2-242ENST00000635530 C1QTNF2Q9BXJ5 285 aa12.43□□□□□ -0.42
SMARCA2-242ENST00000635530 SRPK2P78362 688 aaKnown RBP12.42□□□□□ -0.42
SMARCA2-242ENST00000635530 TRIM32Q13049 653 aa12.42□□□□□ -0.42
SMARCA2-242ENST00000635530 TBC1D9Q6ZT07 1266 aa12.42□□□□□ -0.42
SMARCA2-242ENST00000635530 ERFEQ4G0M1 354 aa12.41□□□□□ -0.42
SMARCA2-242ENST00000635530 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
SMARCA2-242ENST00000635530 PCDHB9Q9Y5E1 797 aa12.41□□□□□ -0.42
SMARCA2-242ENST00000635530 SKOR1P84550 965 aa12.4□□□□□ -0.42
SMARCA2-242ENST00000635530 ZBTB33Q86T24 672 aa12.4□□□□□ -0.42
SMARCA2-242ENST00000635530 BPHLQ86WA6 291 aaPredicted RBP12.4□□□□□ -0.42
SMARCA2-242ENST00000635530 FAM174AQ8TBP5 190 aa12.4□□□□□ -0.42
SMARCA2-242ENST00000635530 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
SMARCA2-242ENST00000635530 TFIP11Q9UBB9 837 aaKnown RBP12.4□□□□□ -0.42
SMARCA2-242ENST00000635530 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
SMARCA2-242ENST00000635530 CEP126Q9P2H0 1117 aa12.39□□□□□ -0.43
SMARCA2-242ENST00000635530 MAFBQ9Y5Q3 323 aaPredicted RBP12.39□□□□□ -0.43
SMARCA2-242ENST00000635530 MCCD1P59942 119 aaPredicted RBP12.38□□□□□ -0.43
SMARCA2-242ENST00000635530 PHTF2Q8N3S3 785 aa12.38□□□□□ -0.43
SMARCA2-242ENST00000635530 ATP9BO43861 1147 aa12.37□□□□□ -0.43
SMARCA2-242ENST00000635530 RPIAP49247 311 aa12.37□□□□□ -0.43
SMARCA2-242ENST00000635530 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
SMARCA2-242ENST00000635530 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
SMARCA2-242ENST00000635530 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-242ENST00000635530 ZBTB24O43167 697 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-242ENST00000635530 PPP1R15AO75807 674 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-242ENST00000635530 TRMT44Q8IYL2 757 aaKnown RBP12.36□□□□□ -0.43
SMARCA2-242ENST00000635530 PBXIP1Q96AQ6 731 aa12.36□□□□□ -0.43
SMARCA2-242ENST00000635530 RFX1P22670 979 aa12.35□□□□□ -0.43
SMARCA2-242ENST00000635530 LMOD1P29536 600 aaPredicted RBP12.35□□□□□ -0.43
SMARCA2-242ENST00000635530 WNT7BP56706 349 aa12.35□□□□□ -0.43
SMARCA2-242ENST00000635530 AGERQ15109 404 aa12.35□□□□□ -0.43
SMARCA2-242ENST00000635530 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
SMARCA2-242ENST00000635530 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
SMARCA2-242ENST00000635530 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-242ENST00000635530 USP17L5A8MUK1 530 aa12.31□□□□□ -0.44
SMARCA2-242ENST00000635530 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
SMARCA2-242ENST00000635530 SLC10A4Q96EP9 437 aa12.31□□□□□ -0.44
SMARCA2-242ENST00000635530 SKIP12755 728 aa12.3□□□□□ -0.44
SMARCA2-242ENST00000635530 SLFNL1Q499Z3 407 aa12.3□□□□□ -0.44
SMARCA2-242ENST00000635530 TRAF7Q6Q0C0 670 aa12.3□□□□□ -0.44
SMARCA2-242ENST00000635530 RNF135Q8IUD6 432 aa12.3□□□□□ -0.44
SMARCA2-242ENST00000635530 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
SMARCA2-242ENST00000635530 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
SMARCA2-242ENST00000635530 ESPNB1AK53 854 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms