RNA–Protein interactions for RNA: ENST00000635406.1

ATP7B-216, Transcript of ATPase copper transporting beta, humanhuman

TSL 4

Gene ATP7B, Length 506 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-216ENST00000635406 PHRF1Q9P1Y6 1649 aaKnown RBP29.63■■■□□ 2.33
ATP7B-216ENST00000635406 ST20-MTHFSA0A0A6YYL1 179 aa29.63■■■□□ 2.33
ATP7B-216ENST00000635406 NGLY1Q96IV0 654 aa29.63■■■□□ 2.33
ATP7B-216ENST00000635406 TESK2Q96S53 571 aa29.63■■■□□ 2.33
ATP7B-216ENST00000635406 ATAD2Q6PL18 1390 aa29.63■■■□□ 2.33
ATP7B-216ENST00000635406 PLCH1Q4KWH8 1693 aa29.61■■■□□ 2.33
ATP7B-216ENST00000635406 USP6P35125 1406 aa29.61■■■□□ 2.33
ATP7B-216ENST00000635406 NRKQ7Z2Y5 1582 aa29.6■■■□□ 2.33
ATP7B-216ENST00000635406 HAP1P54257 671 aaPredicted RBP29.58■■■□□ 2.33
ATP7B-216ENST00000635406 MON2Q7Z3U7 1717 aa29.57■■■□□ 2.32
ATP7B-216ENST00000635406 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.57■■■□□ 2.32
ATP7B-216ENST00000635406 PIK3C2AO00443 1686 aa29.56■■■□□ 2.32
ATP7B-216ENST00000635406 NUTM2GQ5VZR2 741 aa29.56■■■□□ 2.32
ATP7B-216ENST00000635406 FNBP4Q8N3X1 1017 aaPredicted RBP29.56■■■□□ 2.32
ATP7B-216ENST00000635406 SLIT2O94813 1529 aa29.55■■■□□ 2.32
ATP7B-216ENST00000635406 BCL9LQ86UU0 1499 aa29.55■■■□□ 2.32
ATP7B-216ENST00000635406 SSH2Q76I76 1423 aa29.54■■■□□ 2.32
ATP7B-216ENST00000635406 USP21Q9UK80 565 aa29.54■■■□□ 2.32
ATP7B-216ENST00000635406 CD163L1Q9NR16 1453 aa29.54■■■□□ 2.32
ATP7B-216ENST00000635406 SOCS7O14512 581 aa29.53■■■□□ 2.32
ATP7B-216ENST00000635406 CPSF1Q10570 1443 aaKnown RBP29.53■■■□□ 2.32
ATP7B-216ENST00000635406 NWD2Q9ULI1 1742 aa29.52■■■□□ 2.32
ATP7B-216ENST00000635406 ATRNO75882 1429 aa29.51■■■□□ 2.31
ATP7B-216ENST00000635406 NRAPQ86VF7 1730 aa29.51■■■□□ 2.31
ATP7B-216ENST00000635406 COL14A1Q05707 1796 aaKnown RBP29.49■■■□□ 2.31
ATP7B-216ENST00000635406 ABTB2Q8N961 1025 aa29.49■■■□□ 2.31
ATP7B-216ENST00000635406 QTRT2Q9H974 415 aaKnown RBP29.49■■■□□ 2.31
ATP7B-216ENST00000635406 BRD4O60885 1362 aaPredicted RBP29.49■■■□□ 2.31
ATP7B-216ENST00000635406 USP19O94966 1318 aa29.46■■■□□ 2.31
ATP7B-216ENST00000635406 RXRBP28702 533 aa29.46■■■□□ 2.31
ATP7B-216ENST00000635406 TMC1Q8TDI8 760 aa29.46■■■□□ 2.31
ATP7B-216ENST00000635406 KTN1Q86UP2 1357 aaKnown RBP29.45■■■□□ 2.31
ATP7B-216ENST00000635406 RGS12O14924 1447 aa29.45■■■□□ 2.3
ATP7B-216ENST00000635406 FAM83GA6ND36 823 aa29.44■■■□□ 2.3
ATP7B-216ENST00000635406 SLC12A5Q9H2X9 1139 aa29.44■■■□□ 2.3
ATP7B-216ENST00000635406 CDK12Q9NYV4 1490 aaPredicted RBP29.43■■■□□ 2.3
ATP7B-216ENST00000635406 A0A1W2PP64 1363 aa29.43■■■□□ 2.3
ATP7B-216ENST00000635406 PUS7Q96PZ0 661 aaKnown RBP29.43■■■□□ 2.3
ATP7B-216ENST00000635406 TRPC5Q9UL62 973 aaPredicted RBP29.43■■■□□ 2.3
ATP7B-216ENST00000635406 SLIT3O75094 1523 aa29.43■■■□□ 2.3
ATP7B-216ENST00000635406 TTC21BQ7Z4L5 1316 aa29.43■■■□□ 2.3
ATP7B-216ENST00000635406 KIAA0232Q92628 1395 aa29.42■■■□□ 2.3
ATP7B-216ENST00000635406 MYOM1P52179 1685 aa29.42■■■□□ 2.3
ATP7B-216ENST00000635406 GLI3P10071 1580 aa29.42■■■□□ 2.3
ATP7B-216ENST00000635406 RBM6P78332 1123 aaKnown RBP29.41■■■□□ 2.3
ATP7B-216ENST00000635406 TMF1P82094 1093 aa29.41■■■□□ 2.3
ATP7B-216ENST00000635406 UNC5CLQ8IV45 518 aa29.41■■■□□ 2.3
ATP7B-216ENST00000635406 ZNF692Q9BU19 519 aaPredicted RBP29.41■■■□□ 2.3
ATP7B-216ENST00000635406 NLRP13Q86W25 1043 aa29.38■■■□□ 2.29
ATP7B-216ENST00000635406 PRDM11Q9NQV5 511 aa29.38■■■□□ 2.29
ATP7B-216ENST00000635406 USP54Q70EL1 1684 aa29.37■■■□□ 2.29
ATP7B-216ENST00000635406 ZC3H6P61129 1189 aaKnown RBP29.37■■■□□ 2.29
ATP7B-216ENST00000635406 NINLQ9Y2I6 1382 aa29.37■■■□□ 2.29
ATP7B-216ENST00000635406 SLC24A1O60721 1099 aa29.36■■■□□ 2.29
ATP7B-216ENST00000635406 NLRP6P59044 892 aa29.36■■■□□ 2.29
ATP7B-216ENST00000635406 CHRNA2Q15822 529 aa29.36■■■□□ 2.29
ATP7B-216ENST00000635406 LMO7Q8WWI1 1683 aa29.36■■■□□ 2.29
ATP7B-216ENST00000635406 TTC21AQ8NDW8 1320 aa29.36■■■□□ 2.29
ATP7B-216ENST00000635406 HDGFL2Q7Z4V5 671 aaPredicted RBP29.35■■■□□ 2.29
ATP7B-216ENST00000635406 BTG4Q9NY30 223 aa29.35■■■□□ 2.29
ATP7B-216ENST00000635406 EDC4Q6P2E9 1401 aaKnown RBP29.35■■■□□ 2.29
ATP7B-216ENST00000635406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.34■■■□□ 2.293e-6■■□□□ 13.8
ATP7B-216ENST00000635406 HSPA5P11021 654 aaKnown RBP29.33■■■□□ 2.29
ATP7B-216ENST00000635406 CPDO75976 1380 aa29.33■■■□□ 2.29
ATP7B-216ENST00000635406 GCP02774 474 aa29.32■■■□□ 2.28
ATP7B-216ENST00000635406 GJD4Q96KN9 370 aaPredicted RBP29.32■■■□□ 2.28
ATP7B-216ENST00000635406 TERF2IPQ9NYB0 399 aa29.32■■■□□ 2.28
ATP7B-216ENST00000635406 ZRANB1Q9UGI0 708 aa29.32■■■□□ 2.28
ATP7B-216ENST00000635406 EIF4G2P78344 907 aaKnown RBP eCLIP29.31■■■□□ 2.28
ATP7B-216ENST00000635406 NFAT5O94916 1531 aa29.3■■■□□ 2.28
ATP7B-216ENST00000635406 ANKRD36BQ8N2N9 1353 aa29.3■■■□□ 2.28
ATP7B-216ENST00000635406 VPS72Q15906 364 aa29.3■■■□□ 2.28
ATP7B-216ENST00000635406 NME9Q86XW9 330 aa29.3■■■□□ 2.28
ATP7B-216ENST00000635406 CAMTA1Q9Y6Y1 1673 aa29.29■■■□□ 2.28
ATP7B-216ENST00000635406 COL18A1P39060 1754 aa29.27■■■□□ 2.28
ATP7B-216ENST00000635406 USP31Q70CQ4 1352 aa29.26■■■□□ 2.28
ATP7B-216ENST00000635406 EP400Q96L91 3159 aa29.26■■■□□ 2.27
ATP7B-216ENST00000635406 BRWD3Q6RI45 1802 aa29.25■■■□□ 2.27
ATP7B-216ENST00000635406 SOX12O15370 315 aa29.25■■■□□ 2.27
ATP7B-216ENST00000635406 CDCA8Q53HL2 280 aa29.25■■■□□ 2.27
ATP7B-216ENST00000635406 CCDC9Q9Y3X0 531 aaKnown RBP29.25■■■□□ 2.27
ATP7B-216ENST00000635406 OVOS2A0A0J9YW53 1432 aa29.24■■■□□ 2.27
ATP7B-216ENST00000635406 ZBTB7CA1YPR0 619 aa29.24■■■□□ 2.27
ATP7B-216ENST00000635406 OVOS2Q6IE36 1432 aa29.24■■■□□ 2.27
ATP7B-216ENST00000635406 RGPD5Q99666 1765 aa29.23■■■□□ 2.27
ATP7B-216ENST00000635406 LTN1O94822 1766 aa29.22■■■□□ 2.27
ATP7B-216ENST00000635406 KIF20BQ96Q89 1820 aa29.22■■■□□ 2.27
ATP7B-216ENST00000635406 STRN4Q9NRL3 753 aa29.21■■■□□ 2.27
ATP7B-216ENST00000635406 COL5A2P05997 1499 aaPredicted RBP29.21■■■□□ 2.27
ATP7B-216ENST00000635406 SPATA31A5Q5VU36 1347 aa29.19■■■□□ 2.26
ATP7B-216ENST00000635406 SPATA31A7Q8IWB4 1347 aa29.19■■■□□ 2.26
ATP7B-216ENST00000635406 AATKQ6ZMQ8 1374 aa29.18■■■□□ 2.26
ATP7B-216ENST00000635406 POLR3GLQ9BT43 218 aa29.18■■■□□ 2.26
ATP7B-216ENST00000635406 THSD7AQ9UPZ6 1657 aa29.18■■■□□ 2.26
ATP7B-216ENST00000635406 KCNH5Q8NCM2 988 aa29.17■■■□□ 2.26
ATP7B-216ENST00000635406 ARHGEF25Q86VW2 580 aa29.16■■■□□ 2.26
ATP7B-216ENST00000635406 FAM98CQ17RN3 349 aaKnown RBP29.14■■■□□ 2.26
ATP7B-216ENST00000635406 SPATA31A1Q5TZJ5 1347 aa29.14■■■□□ 2.25
ATP7B-216ENST00000635406 NSD3Q9BZ95 1437 aa29.13■■■□□ 2.25
ATP7B-216ENST00000635406 C11orf95C9JLR9 678 aaPredicted RBP29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms