RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 ANKRD26Q9UPS8 1709 aa16.22■□□□□ 0.19
UBASH3A-209ENST00000635325 TCERG1O14776 1098 aaKnown RBP16.21■□□□□ 0.19
UBASH3A-209ENST00000635325 KDM2BQ8NHM5 1336 aa16.21■□□□□ 0.18
UBASH3A-209ENST00000635325 U2SURPO15042 1029 aaKnown RBP16.2■□□□□ 0.18
UBASH3A-209ENST00000635325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.18
UBASH3A-209ENST00000635325 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
UBASH3A-209ENST00000635325 WDR63Q8IWG1 891 aa16.2■□□□□ 0.18
UBASH3A-209ENST00000635325 ADGRB2O60241 1585 aa16.2■□□□□ 0.18
UBASH3A-209ENST00000635325 DIP2AQ14689 1571 aa16.2■□□□□ 0.18
UBASH3A-209ENST00000635325 ATP7BP35670 1465 aa16.19■□□□□ 0.18
UBASH3A-209ENST00000635325 TECPR2O15040 1411 aa16.19■□□□□ 0.18
UBASH3A-209ENST00000635325 WASLO00401 505 aaPredicted RBP16.18■□□□□ 0.18
UBASH3A-209ENST00000635325 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
UBASH3A-209ENST00000635325 KNDC1Q76NI1 1749 aa16.18■□□□□ 0.18
UBASH3A-209ENST00000635325 KIF20BQ96Q89 1820 aa16.18■□□□□ 0.18
UBASH3A-209ENST00000635325 FBLN1P23142 703 aa16.18■□□□□ 0.18
UBASH3A-209ENST00000635325 NCKAP5LQ9HCH0 1330 aa16.17■□□□□ 0.18
UBASH3A-209ENST00000635325 PNPLA6Q8IY17 1366 aa16.17■□□□□ 0.18
UBASH3A-209ENST00000635325 TBX22Q9Y458 520 aa16.17■□□□□ 0.18
UBASH3A-209ENST00000635325 PPIP5K1Q6PFW1 1433 aa16.16■□□□□ 0.18
UBASH3A-209ENST00000635325 CPS1P31327 1500 aa16.16■□□□□ 0.18
UBASH3A-209ENST00000635325 ANKLE2Q86XL3 938 aa16.16■□□□□ 0.18
UBASH3A-209ENST00000635325 SIRT1Q96EB6 747 aa16.16■□□□□ 0.18
UBASH3A-209ENST00000635325 CPSF1Q10570 1443 aaKnown RBP16.15■□□□□ 0.18
UBASH3A-209ENST00000635325 MS4A1P11836 297 aa16.15■□□□□ 0.18
UBASH3A-209ENST00000635325 PDE4AP27815 886 aa16.15■□□□□ 0.18
UBASH3A-209ENST00000635325 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
UBASH3A-209ENST00000635325 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
UBASH3A-209ENST00000635325 CENPQQ7L2Z9 268 aaPredicted RBP16.15■□□□□ 0.18
UBASH3A-209ENST00000635325 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
UBASH3A-209ENST00000635325 DIAPH1O60610 1272 aaKnown RBP16.14■□□□□ 0.17
UBASH3A-209ENST00000635325 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
UBASH3A-209ENST00000635325 ROBO2Q9HCK4 1378 aa16.14■□□□□ 0.17
UBASH3A-209ENST00000635325 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
UBASH3A-209ENST00000635325 NUDT16Q96DE0 195 aaKnown RBP16.14■□□□□ 0.17
UBASH3A-209ENST00000635325 POLKQ9UBT6 870 aa16.14■□□□□ 0.17
UBASH3A-209ENST00000635325 PDE3AQ14432 1141 aa16.13■□□□□ 0.17
UBASH3A-209ENST00000635325 NME9Q86XW9 330 aa16.13■□□□□ 0.17
UBASH3A-209ENST00000635325 SLC26A8Q96RN1 970 aa16.13■□□□□ 0.17
UBASH3A-209ENST00000635325 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
UBASH3A-209ENST00000635325 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
UBASH3A-209ENST00000635325 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
UBASH3A-209ENST00000635325 FRAT1Q92837 279 aaPredicted RBP16.12■□□□□ 0.17
UBASH3A-209ENST00000635325 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
UBASH3A-209ENST00000635325 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
UBASH3A-209ENST00000635325 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
UBASH3A-209ENST00000635325 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
UBASH3A-209ENST00000635325 EDC4Q6P2E9 1401 aaKnown RBP16.12■□□□□ 0.17
UBASH3A-209ENST00000635325 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
UBASH3A-209ENST00000635325 PIK3R4Q99570 1358 aa16.11■□□□□ 0.17
UBASH3A-209ENST00000635325 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
UBASH3A-209ENST00000635325 TSR2Q969E8 191 aaKnown RBP16.11■□□□□ 0.17
UBASH3A-209ENST00000635325 COG6Q9Y2V7 657 aa16.11■□□□□ 0.17
UBASH3A-209ENST00000635325 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
UBASH3A-209ENST00000635325 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
UBASH3A-209ENST00000635325 ANP32AP39687 249 aaKnown RBP16.1■□□□□ 0.17
UBASH3A-209ENST00000635325 CCDC61Q9Y6R9 512 aa16.1■□□□□ 0.17
UBASH3A-209ENST00000635325 CDC42BPGQ6DT37 1551 aa16.1■□□□□ 0.17
UBASH3A-209ENST00000635325 EMILIN1Q9Y6C2 1016 aa16.09■□□□□ 0.17
UBASH3A-209ENST00000635325 NPHP4O75161 1426 aaPredicted RBP16.09■□□□□ 0.17
UBASH3A-209ENST00000635325 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
UBASH3A-209ENST00000635325 LRRC7Q96NW7 1537 aa16.08■□□□□ 0.17
UBASH3A-209ENST00000635325 RLBP1P12271 317 aa16.08■□□□□ 0.16
UBASH3A-209ENST00000635325 XRN1Q8IZH2 1706 aaKnown RBP16.08■□□□□ 0.16
UBASH3A-209ENST00000635325 PAK3O75914 559 aaPredicted RBP16.07■□□□□ 0.16
UBASH3A-209ENST00000635325 IGHDP01880 384 aa16.07■□□□□ 0.16
UBASH3A-209ENST00000635325 RIPK4P57078 832 aa16.07■□□□□ 0.16
UBASH3A-209ENST00000635325 IPO9Q96P70 1041 aaKnown RBP16.07■□□□□ 0.16
UBASH3A-209ENST00000635325 RSPH6AQ9H0K4 717 aa16.07■□□□□ 0.16
UBASH3A-209ENST00000635325 FCHSD2O94868 740 aa16.06■□□□□ 0.16
UBASH3A-209ENST00000635325 NPM2Q86SE8 214 aaKnown RBP16.06■□□□□ 0.16
UBASH3A-209ENST00000635325 CLUAP1Q96AJ1 413 aa16.06■□□□□ 0.16
UBASH3A-209ENST00000635325 AMOTL2Q9Y2J4 779 aa16.06■□□□□ 0.16
UBASH3A-209ENST00000635325 NOP58Q9Y2X3 529 aaKnown RBP16.06■□□□□ 0.16
UBASH3A-209ENST00000635325 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
UBASH3A-209ENST00000635325 EXOSC9Q06265 439 aaKnown RBP16.06■□□□□ 0.16
UBASH3A-209ENST00000635325 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
UBASH3A-209ENST00000635325 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.05■□□□□ 0.16
UBASH3A-209ENST00000635325 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
UBASH3A-209ENST00000635325 HMOX1P09601 288 aa16.04■□□□□ 0.16
UBASH3A-209ENST00000635325 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
UBASH3A-209ENST00000635325 PHACTR3Q96KR7 559 aa16.04■□□□□ 0.16
UBASH3A-209ENST00000635325 IL16Q14005 1332 aa16.04■□□□□ 0.16
UBASH3A-209ENST00000635325 NUTM2FA1L443 756 aa16.03■□□□□ 0.16
UBASH3A-209ENST00000635325 IL13P35225 146 aa16.03■□□□□ 0.16
UBASH3A-209ENST00000635325 COG3Q96JB2 828 aa16.03■□□□□ 0.16
UBASH3A-209ENST00000635325 PNNQ9H307 717 aaKnown RBP16.03■□□□□ 0.16
UBASH3A-209ENST00000635325 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
UBASH3A-209ENST00000635325 AATKQ6ZMQ8 1374 aa16.03■□□□□ 0.16
UBASH3A-209ENST00000635325 AKAP12Q02952 1782 aa16.03■□□□□ 0.16
UBASH3A-209ENST00000635325 RGS3P49796 1198 aa16.03■□□□□ 0.16
UBASH3A-209ENST00000635325 LMTK3Q96Q04 1460 aa16.02■□□□□ 0.15
UBASH3A-209ENST00000635325 ITSN1Q15811 1721 aa16.01■□□□□ 0.15
UBASH3A-209ENST00000635325 CT47B1P0C2W7 299 aaPredicted RBP16.01■□□□□ 0.15
UBASH3A-209ENST00000635325 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
UBASH3A-209ENST00000635325 CHD2O14647 1828 aaKnown RBP16■□□□□ 0.15
UBASH3A-209ENST00000635325 SSH1Q8WYL5 1049 aa16■□□□□ 0.15
UBASH3A-209ENST00000635325 SMC4Q9NTJ3 1288 aa16■□□□□ 0.15
UBASH3A-209ENST00000635325 PCDHB15Q9Y5E8 787 aa16■□□□□ 0.15
UBASH3A-209ENST00000635325 ACEP12821 1306 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms