RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 NBPF1Q3BBV0 1214 aa13.96□□□□□ -0.17
COL11A1-211ENST00000635193 TSR2Q969E8 191 aaKnown RBP13.96□□□□□ -0.17
COL11A1-211ENST00000635193 DEF6Q9H4E7 631 aa13.96□□□□□ -0.17
COL11A1-211ENST00000635193 GAPVD1Q14C86 1478 aa13.96□□□□□ -0.18
COL11A1-211ENST00000635193 MVPQ14764 893 aaKnown RBP13.96□□□□□ -0.18
COL11A1-211ENST00000635193 MPNDQ8N594 471 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 GNAI3P08754 354 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 AXDND1Q5T1B0 1012 aaPredicted RBP13.95□□□□□ -0.18
COL11A1-211ENST00000635193 CAGE1Q8TC20 777 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 CFTRP13569 1480 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 PDCP20941 246 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 RAD54L2Q9Y4B4 1467 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 USP8P40818 1118 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 SAFBQ15424 915 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL11A1-211ENST00000635193 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
COL11A1-211ENST00000635193 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
COL11A1-211ENST00000635193 GTF2E1P29083 439 aaPredicted RBP13.94□□□□□ -0.18
COL11A1-211ENST00000635193 NESP48681 1621 aa13.94□□□□□ -0.18
COL11A1-211ENST00000635193 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
COL11A1-211ENST00000635193 SMC2O95347 1197 aa13.94□□□□□ -0.18
COL11A1-211ENST00000635193 CBX1P83916 185 aa13.94□□□□□ -0.18
COL11A1-211ENST00000635193 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-211ENST00000635193 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
COL11A1-211ENST00000635193 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-211ENST00000635193 CCDC192P0DO97 292 aa13.93□□□□□ -0.18
COL11A1-211ENST00000635193 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
COL11A1-211ENST00000635193 SURF6O75683 361 aaKnown RBP13.93□□□□□ -0.18
COL11A1-211ENST00000635193 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-211ENST00000635193 NAP1L1P55209 391 aaKnown RBP13.93□□□□□ -0.18
COL11A1-211ENST00000635193 RALYLQ86SE5 291 aaKnown RBP13.93□□□□□ -0.18
COL11A1-211ENST00000635193 KIAA0754O94854 1291 aa13.93□□□□□ -0.18
COL11A1-211ENST00000635193 CHD1LQ86WJ1 897 aa13.93□□□□□ -0.18
COL11A1-211ENST00000635193 WDR33Q9C0J8 1336 aaKnown RBP13.92□□□□□ -0.18
COL11A1-211ENST00000635193 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
COL11A1-211ENST00000635193 CLASRPQ8N2M8 674 aaKnown RBP13.92□□□□□ -0.18
COL11A1-211ENST00000635193 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
COL11A1-211ENST00000635193 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
COL11A1-211ENST00000635193 ERICH2A1L162 156 aa13.92□□□□□ -0.18
COL11A1-211ENST00000635193 SKIDA1Q1XH10 827 aa13.92□□□□□ -0.18
COL11A1-211ENST00000635193 TMEM132EQ6IEE7 984 aa13.92□□□□□ -0.18
COL11A1-211ENST00000635193 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
COL11A1-211ENST00000635193 EIF3JO75822 258 aaKnown RBP13.91□□□□□ -0.18
COL11A1-211ENST00000635193 TTLL5Q6EMB2 1281 aa13.91□□□□□ -0.18
COL11A1-211ENST00000635193 DHX8Q14562 1220 aaKnown RBP13.91□□□□□ -0.18
COL11A1-211ENST00000635193 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
COL11A1-211ENST00000635193 NEUROD6Q96NK8 337 aa13.9□□□□□ -0.18
COL11A1-211ENST00000635193 PLCD4Q9BRC7 762 aa13.9□□□□□ -0.18
COL11A1-211ENST00000635193 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
COL11A1-211ENST00000635193 PRM3Q9NNZ6 103 aa13.9□□□□□ -0.18
COL11A1-211ENST00000635193 ERLIN1O75477 346 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 GNAI2P04899 355 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 AEBP1Q8IUX7 1158 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 CGNQ9P2M7 1197 aaKnown RBP13.89□□□□□ -0.19
COL11A1-211ENST00000635193 ZHX1Q9UKY1 873 aaPredicted RBP13.89□□□□□ -0.19
COL11A1-211ENST00000635193 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 G3V3G9 751 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 WASHC4Q2M389 1173 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 DCAF8Q5TAQ9 597 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
COL11A1-211ENST00000635193 ERBINQ96RT1 1412 aa13.88□□□□□ -0.19
COL11A1-211ENST00000635193 HIP1O00291 1037 aa13.88□□□□□ -0.19
COL11A1-211ENST00000635193 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
COL11A1-211ENST00000635193 CALCOCO1Q9P1Z2 691 aa13.88□□□□□ -0.19
COL11A1-211ENST00000635193 ZNF396Q96N95 335 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-211ENST00000635193 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
COL11A1-211ENST00000635193 AMOTL1Q8IY63 956 aa13.88□□□□□ -0.19
COL11A1-211ENST00000635193 SKAP1Q86WV1 359 aa13.87□□□□□ -0.19
COL11A1-211ENST00000635193 AIMP1Q12904 312 aaKnown RBP13.87□□□□□ -0.19
COL11A1-211ENST00000635193 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
COL11A1-211ENST00000635193 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL11A1-211ENST00000635193 CEBPZQ03701 1054 aaKnown RBP13.87□□□□□ -0.19
COL11A1-211ENST00000635193 EHBP1L1Q8N3D4 1523 aa13.87□□□□□ -0.19
COL11A1-211ENST00000635193 KRT85P78386 507 aa13.86□□□□□ -0.19
COL11A1-211ENST00000635193 SMARCE1Q969G3 411 aa13.86□□□□□ -0.19
COL11A1-211ENST00000635193 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
COL11A1-211ENST00000635193 XPCQ01831 940 aaPredicted RBP13.85□□□□□ -0.19
COL11A1-211ENST00000635193 C20orf194Q5TEA3 1177 aa13.85□□□□□ -0.19
COL11A1-211ENST00000635193 STK38Q15208 465 aa13.85□□□□□ -0.19
COL11A1-211ENST00000635193 SLC12A5Q9H2X9 1139 aa13.85□□□□□ -0.19
COL11A1-211ENST00000635193 SYCE3A1L190 88 aa13.85□□□□□ -0.19
COL11A1-211ENST00000635193 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
COL11A1-211ENST00000635193 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 NOL10Q9BSC4 688 aaKnown RBP13.84□□□□□ -0.19
COL11A1-211ENST00000635193 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 DHX16O60231 1041 aaKnown RBP13.84□□□□□ -0.19
COL11A1-211ENST00000635193 CCT4P50991 539 aaKnown RBP13.84□□□□□ -0.19
COL11A1-211ENST00000635193 FILIP1LQ4L180 1135 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 BRMS1Q9HCU9 246 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 ANKRD1Q15327 319 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 ERC1Q8IUD2 1116 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
COL11A1-211ENST00000635193 MYO6Q9UM54 1294 aa13.84□□□□□ -0.19
COL11A1-211ENST00000635193 LARP1BQ659C4 914 aaKnown RBP13.83□□□□□ -0.2
COL11A1-211ENST00000635193 GIMAP7Q8NHV1 300 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms