RNA–Protein interactions for RNA: ENST00000633646.1

GRAMD1B-213, Transcript of GRAM domain containing 1B, humanhuman

TSL 3

Gene GRAMD1B, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-213ENST00000633646 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.44
GRAMD1B-213ENST00000633646 SLIT2O94813 1529 aa24.07■■□□□ 1.44
GRAMD1B-213ENST00000633646 CDK12Q9NYV4 1490 aaPredicted RBP24.07■■□□□ 1.44
GRAMD1B-213ENST00000633646 RGS12O14924 1447 aa24.06■■□□□ 1.44
GRAMD1B-213ENST00000633646 RALGAPBQ86X10 1494 aa24.06■■□□□ 1.44
GRAMD1B-213ENST00000633646 EVC2Q86UK5 1308 aa24.05■■□□□ 1.44
GRAMD1B-213ENST00000633646 FAM83GA6ND36 823 aa24.04■■□□□ 1.44
GRAMD1B-213ENST00000633646 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
GRAMD1B-213ENST00000633646 NUTM2GQ5VZR2 741 aa24.03■■□□□ 1.44
GRAMD1B-213ENST00000633646 UNC5CLQ8IV45 518 aa24.03■■□□□ 1.44
GRAMD1B-213ENST00000633646 CRYBG1Q9Y4K1 1723 aa24.01■■□□□ 1.43
GRAMD1B-213ENST00000633646 GJD4Q96KN9 370 aaPredicted RBP23.99■■□□□ 1.43
GRAMD1B-213ENST00000633646 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.98■■□□□ 1.43
GRAMD1B-213ENST00000633646 PLCH1Q4KWH8 1693 aa23.98■■□□□ 1.43
GRAMD1B-213ENST00000633646 ABTB2Q8N961 1025 aa23.97■■□□□ 1.43
GRAMD1B-213ENST00000633646 UPF1Q92900 1129 aaKnown RBP eCLIP23.96■■□□□ 1.43
GRAMD1B-213ENST00000633646 SBNO2Q9Y2G9 1366 aa23.95■■□□□ 1.42
GRAMD1B-213ENST00000633646 GLI3P10071 1580 aa23.95■■□□□ 1.42
GRAMD1B-213ENST00000633646 BTG4Q9NY30 223 aa23.94■■□□□ 1.42
GRAMD1B-213ENST00000633646 USP6P35125 1406 aa23.93■■□□□ 1.42
GRAMD1B-213ENST00000633646 NWD2Q9ULI1 1742 aa23.93■■□□□ 1.42
GRAMD1B-213ENST00000633646 PHRF1Q9P1Y6 1649 aaKnown RBP23.92■■□□□ 1.42
GRAMD1B-213ENST00000633646 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
GRAMD1B-213ENST00000633646 VPS72Q15906 364 aa23.92■■□□□ 1.42
GRAMD1B-213ENST00000633646 KIAA0232Q92628 1395 aa23.91■■□□□ 1.42
GRAMD1B-213ENST00000633646 SSH2Q76I76 1423 aa23.91■■□□□ 1.42
GRAMD1B-213ENST00000633646 COL14A1Q05707 1796 aaKnown RBP23.91■■□□□ 1.42
GRAMD1B-213ENST00000633646 CHRNA2Q15822 529 aa23.9■■□□□ 1.42
GRAMD1B-213ENST00000633646 PRDM11Q9NQV5 511 aa23.9■■□□□ 1.42
GRAMD1B-213ENST00000633646 NRAPQ86VF7 1730 aa23.9■■□□□ 1.42
GRAMD1B-213ENST00000633646 ATAD2Q6PL18 1390 aa23.9■■□□□ 1.42
GRAMD1B-213ENST00000633646 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.42
GRAMD1B-213ENST00000633646 ST20-MTHFSA0A0A6YYL1 179 aa23.89■■□□□ 1.41
GRAMD1B-213ENST00000633646 CCDC9Q9Y3X0 531 aaKnown RBP23.89■■□□□ 1.41
GRAMD1B-213ENST00000633646 USP19O94966 1318 aa23.88■■□□□ 1.41
GRAMD1B-213ENST00000633646 NLRP13Q86W25 1043 aa23.88■■□□□ 1.41
GRAMD1B-213ENST00000633646 TESK2Q96S53 571 aa23.88■■□□□ 1.41
GRAMD1B-213ENST00000633646 BRD4O60885 1362 aaPredicted RBP23.88■■□□□ 1.41
GRAMD1B-213ENST00000633646 NRKQ7Z2Y5 1582 aa23.86■■□□□ 1.41
GRAMD1B-213ENST00000633646 CPSF1Q10570 1443 aaKnown RBP23.86■■□□□ 1.41
GRAMD1B-213ENST00000633646 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
GRAMD1B-213ENST00000633646 GCP02774 474 aa23.85■■□□□ 1.41
GRAMD1B-213ENST00000633646 NLRP6P59044 892 aa23.85■■□□□ 1.41
GRAMD1B-213ENST00000633646 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
GRAMD1B-213ENST00000633646 AKAP12Q02952 1782 aa23.85■■□□□ 1.41
GRAMD1B-213ENST00000633646 TTC21BQ7Z4L5 1316 aa23.84■■□□□ 1.41
GRAMD1B-213ENST00000633646 CD163L1Q9NR16 1453 aa23.83■■□□□ 1.41
GRAMD1B-213ENST00000633646 ONECUT3O60422 494 aaPredicted RBP23.83■■□□□ 1.41
GRAMD1B-213ENST00000633646 SLC12A5Q9H2X9 1139 aa23.83■■□□□ 1.41
GRAMD1B-213ENST00000633646 PIK3C2AO00443 1686 aa23.83■■□□□ 1.4
GRAMD1B-213ENST00000633646 SEPT12Q8IYM1 358 aa23.82■■□□□ 1.4
GRAMD1B-213ENST00000633646 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
GRAMD1B-213ENST00000633646 TMC1Q8TDI8 760 aa23.82■■□□□ 1.4
GRAMD1B-213ENST00000633646 KTN1Q86UP2 1357 aaKnown RBP23.81■■□□□ 1.4
GRAMD1B-213ENST00000633646 CPDO75976 1380 aa23.79■■□□□ 1.4
GRAMD1B-213ENST00000633646 USP47Q96K76 1375 aa23.79■■□□□ 1.4
GRAMD1B-213ENST00000633646 FAM98CQ17RN3 349 aaKnown RBP23.79■■□□□ 1.4
GRAMD1B-213ENST00000633646 STRN4Q9NRL3 753 aa23.79■■□□□ 1.4
GRAMD1B-213ENST00000633646 SPATA31A5Q5VU36 1347 aa23.79■■□□□ 1.4
GRAMD1B-213ENST00000633646 SPATA31A7Q8IWB4 1347 aa23.79■■□□□ 1.4
GRAMD1B-213ENST00000633646 SLIT3O75094 1523 aa23.79■■□□□ 1.4
GRAMD1B-213ENST00000633646 PUS7Q96PZ0 661 aaKnown RBP23.78■■□□□ 1.4
GRAMD1B-213ENST00000633646 CAMTA1Q9Y6Y1 1673 aa23.78■■□□□ 1.4
GRAMD1B-213ENST00000633646 BRWD3Q6RI45 1802 aa23.77■■□□□ 1.4
GRAMD1B-213ENST00000633646 ZRANB1Q9UGI0 708 aa23.77■■□□□ 1.4
GRAMD1B-213ENST00000633646 TTC21AQ8NDW8 1320 aa23.77■■□□□ 1.4
GRAMD1B-213ENST00000633646 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
GRAMD1B-213ENST00000633646 ZBTB7CA1YPR0 619 aa23.76■■□□□ 1.39
GRAMD1B-213ENST00000633646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.39
GRAMD1B-213ENST00000633646 LMO7Q8WWI1 1683 aa23.76■■□□□ 1.39
GRAMD1B-213ENST00000633646 SPATA31A1Q5TZJ5 1347 aa23.74■■□□□ 1.39
GRAMD1B-213ENST00000633646 A0A1W2PP64 1363 aa23.74■■□□□ 1.39
GRAMD1B-213ENST00000633646 A0A0G2JS52 829 aa23.73■■□□□ 1.39
GRAMD1B-213ENST00000633646 SOX12O15370 315 aa23.73■■□□□ 1.39
GRAMD1B-213ENST00000633646 EVA1CP58658 441 aa23.73■■□□□ 1.39
GRAMD1B-213ENST00000633646 MYT1Q01538 1121 aa23.73■■□□□ 1.39
GRAMD1B-213ENST00000633646 LARP1Q6PKG0 1096 aaKnown RBP23.73■■□□□ 1.39
GRAMD1B-213ENST00000633646 HDGFL2Q7Z4V5 671 aaPredicted RBP23.73■■□□□ 1.39
GRAMD1B-213ENST00000633646 NME9Q86XW9 330 aa23.72■■□□□ 1.39
GRAMD1B-213ENST00000633646 USP35Q9P2H5 1018 aa23.72■■□□□ 1.39
GRAMD1B-213ENST00000633646 KRT27Q7Z3Y8 459 aa23.71■■□□□ 1.39
GRAMD1B-213ENST00000633646 TMF1P82094 1093 aa23.7■■□□□ 1.38
GRAMD1B-213ENST00000633646 TERF2IPQ9NYB0 399 aa23.7■■□□□ 1.38
GRAMD1B-213ENST00000633646 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
GRAMD1B-213ENST00000633646 ARHGEF25Q86VW2 580 aa23.69■■□□□ 1.38
GRAMD1B-213ENST00000633646 AXIN2Q9Y2T1 843 aa23.69■■□□□ 1.38
GRAMD1B-213ENST00000633646 COL5A2P05997 1499 aaPredicted RBP23.68■■□□□ 1.38
GRAMD1B-213ENST00000633646 AATKQ6ZMQ8 1374 aa23.68■■□□□ 1.38
GRAMD1B-213ENST00000633646 KCNH5Q8NCM2 988 aa23.68■■□□□ 1.38
GRAMD1B-213ENST00000633646 EDC4Q6P2E9 1401 aaKnown RBP23.67■■□□□ 1.38
GRAMD1B-213ENST00000633646 USP31Q70CQ4 1352 aa23.67■■□□□ 1.38
GRAMD1B-213ENST00000633646 THSD7AQ9UPZ6 1657 aa23.67■■□□□ 1.38
GRAMD1B-213ENST00000633646 FAM182BQ5T319 152 aa23.67■■□□□ 1.38
GRAMD1B-213ENST00000633646 COL18A1P39060 1754 aa23.67■■□□□ 1.38
GRAMD1B-213ENST00000633646 NFAT5O94916 1531 aa23.66■■□□□ 1.38
GRAMD1B-213ENST00000633646 EP400Q96L91 3159 aa23.65■■□□□ 1.38
GRAMD1B-213ENST00000633646 NINLQ9Y2I6 1382 aa23.65■■□□□ 1.38
GRAMD1B-213ENST00000633646 BARGINQ6ZT62 677 aa23.63■■□□□ 1.37
GRAMD1B-213ENST00000633646 CCDC125Q86Z20 511 aa23.63■■□□□ 1.37
GRAMD1B-213ENST00000633646 TCP11L2Q8N4U5 519 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms