RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 GNL3LQ9NVN8 582 aaKnown RBP14.07□□□□□ -0.16
SHPRH-211ENST00000629427 SKIDA1Q1XH10 827 aa14.07□□□□□ -0.16
SHPRH-211ENST00000629427 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
SHPRH-211ENST00000629427 TATP17735 454 aaPredicted RBP14.07□□□□□ -0.16
SHPRH-211ENST00000629427 BRPF1P55201 1214 aaPredicted RBP14.06□□□□□ -0.16
SHPRH-211ENST00000629427 CDC45O75419 566 aa14.06□□□□□ -0.16
SHPRH-211ENST00000629427 TOM1L2Q6ZVM7 507 aa14.06□□□□□ -0.16
SHPRH-211ENST00000629427 ZNF644Q9H582 1327 aaPredicted RBP14.06□□□□□ -0.16
SHPRH-211ENST00000629427 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
SHPRH-211ENST00000629427 ACBD3Q9H3P7 528 aa14.06□□□□□ -0.16
SHPRH-211ENST00000629427 RSPH6AQ9H0K4 717 aa14.05□□□□□ -0.16
SHPRH-211ENST00000629427 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
SHPRH-211ENST00000629427 GNAI3P08754 354 aa14.05□□□□□ -0.16
SHPRH-211ENST00000629427 CNTLNQ9NXG0 1405 aa14.05□□□□□ -0.16
SHPRH-211ENST00000629427 HIP1O00291 1037 aa14.05□□□□□ -0.16
SHPRH-211ENST00000629427 MYO6Q9UM54 1294 aa14.05□□□□□ -0.16
SHPRH-211ENST00000629427 MYL6BP14649 208 aa14.05□□□□□ -0.16
SHPRH-211ENST00000629427 PIP4K2BP78356 416 aa14.05□□□□□ -0.16
SHPRH-211ENST00000629427 FAM13BQ9NYF5 915 aa14.05□□□□□ -0.16
SHPRH-211ENST00000629427 ARGLU1Q9NWB6 273 aaPredicted RBP14.04□□□□□ -0.16
SHPRH-211ENST00000629427 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
SHPRH-211ENST00000629427 CEBPZQ03701 1054 aaKnown RBP14.04□□□□□ -0.16
SHPRH-211ENST00000629427 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.165e-7■■■■□ 19.8
SHPRH-211ENST00000629427 SMC2O95347 1197 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 KINO60870 393 aaKnown RBP14.03□□□□□ -0.16
SHPRH-211ENST00000629427 SIL1Q9H173 461 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 ERC1Q8IUD2 1116 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 ZHX3Q9H4I2 956 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 FYCO1Q9BQS8 1478 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 HSP90B2PQ58FF3 399 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 PRAM1Q96QH2 718 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 C1orf115Q9H7X2 142 aa14.03□□□□□ -0.16
SHPRH-211ENST00000629427 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
SHPRH-211ENST00000629427 GNAI2P04899 355 aa14.02□□□□□ -0.16
SHPRH-211ENST00000629427 FMNL2Q96PY5 1086 aa14.02□□□□□ -0.16
SHPRH-211ENST00000629427 SMARCE1Q969G3 411 aa14.02□□□□□ -0.17
SHPRH-211ENST00000629427 MPHOSPH8Q99549 860 aa14.02□□□□□ -0.17
SHPRH-211ENST00000629427 PRKAR2BP31323 418 aa14.02□□□□□ -0.17
SHPRH-211ENST00000629427 TRIM5Q9C035 493 aa14□□□□□ -0.17
SHPRH-211ENST00000629427 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
SHPRH-211ENST00000629427 CCDC69A6NI79 296 aa14□□□□□ -0.17
SHPRH-211ENST00000629427 MAP4K4O95819 1239 aaPredicted RBP14□□□□□ -0.17
SHPRH-211ENST00000629427 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
SHPRH-211ENST00000629427 ZSCAN29Q8IWY8 852 aaPredicted RBP14□□□□□ -0.17
SHPRH-211ENST00000629427 STAC3Q96MF2 364 aa14□□□□□ -0.17
SHPRH-211ENST00000629427 ADAMTS8Q9UP79 889 aa14□□□□□ -0.17
SHPRH-211ENST00000629427 HDGFL1Q5TGJ6 251 aa14□□□□□ -0.17
SHPRH-211ENST00000629427 NEK4P51957 841 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 RNF214Q8ND24 703 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
SHPRH-211ENST00000629427 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.99□□□□□ -0.17
SHPRH-211ENST00000629427 STK3Q13188 491 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
SHPRH-211ENST00000629427 NEFHP12036 1026 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 MAP7D2Q96T17 732 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 LETM1O95202 739 aaPredicted RBP13.99□□□□□ -0.17
SHPRH-211ENST00000629427 FKBP4Q02790 459 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHPRH-211ENST00000629427 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 PDCL3Q9H2J4 239 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 NOB1Q9ULX3 412 aaKnown RBP13.99□□□□□ -0.17
SHPRH-211ENST00000629427 KIF7Q2M1P5 1343 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 CCDC7Q96M83 1385 aa13.99□□□□□ -0.17
SHPRH-211ENST00000629427 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
SHPRH-211ENST00000629427 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
SHPRH-211ENST00000629427 PDCP20941 246 aa13.98□□□□□ -0.17
SHPRH-211ENST00000629427 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
SHPRH-211ENST00000629427 TCP11L2Q8N4U5 519 aa13.98□□□□□ -0.17
SHPRH-211ENST00000629427 NACAP1Q9BZK3 213 aa13.98□□□□□ -0.17
SHPRH-211ENST00000629427 MPHOSPH10O00566 681 aaKnown RBP13.98□□□□□ -0.17
SHPRH-211ENST00000629427 NUP133Q8WUM0 1156 aa13.98□□□□□ -0.17
SHPRH-211ENST00000629427 ANKRD50Q9ULJ7 1429 aa13.97□□□□□ -0.17
SHPRH-211ENST00000629427 MATR3P43243 847 aaKnown RBP eCLIP13.97□□□□□ -0.175e-6■■■□□ 17.1
SHPRH-211ENST00000629427 AAMPQ13685 434 aa13.97□□□□□ -0.17
SHPRH-211ENST00000629427 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
SHPRH-211ENST00000629427 STK38Q15208 465 aa13.97□□□□□ -0.17
SHPRH-211ENST00000629427 FAM43AQ8N2R8 423 aa13.97□□□□□ -0.17
SHPRH-211ENST00000629427 CAVIN1Q6NZI2 390 aaKnown RBP13.97□□□□□ -0.17
SHPRH-211ENST00000629427 THEMISQ8N1K5 641 aaPredicted RBP13.97□□□□□ -0.17
SHPRH-211ENST00000629427 AFAP1Q8N556 730 aa13.97□□□□□ -0.17
SHPRH-211ENST00000629427 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
SHPRH-211ENST00000629427 FGD6Q6ZV73 1430 aa13.96□□□□□ -0.17
SHPRH-211ENST00000629427 TRIM22Q8IYM9 498 aa13.96□□□□□ -0.17
SHPRH-211ENST00000629427 IBSPP21815 317 aaPredicted RBP13.96□□□□□ -0.17
SHPRH-211ENST00000629427 CCDC39Q9UFE4 941 aa13.96□□□□□ -0.17
SHPRH-211ENST00000629427 EXOSC9Q06265 439 aaKnown RBP13.96□□□□□ -0.17
SHPRH-211ENST00000629427 SOGA3Q5TF21 947 aa13.96□□□□□ -0.18
SHPRH-211ENST00000629427 TANGO6Q9C0B7 1094 aa13.96□□□□□ -0.18
SHPRH-211ENST00000629427 ZNHIT6Q9NWK9 470 aaKnown RBP13.95□□□□□ -0.18
SHPRH-211ENST00000629427 STIM1Q13586 685 aa13.95□□□□□ -0.18
SHPRH-211ENST00000629427 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
SHPRH-211ENST00000629427 NOM1Q5C9Z4 860 aaKnown RBP13.95□□□□□ -0.18
SHPRH-211ENST00000629427 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
SHPRH-211ENST00000629427 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
SHPRH-211ENST00000629427 MCM2P49736 904 aa13.95□□□□□ -0.18
SHPRH-211ENST00000629427 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
SHPRH-211ENST00000629427 FIBPO43427 364 aa13.94□□□□□ -0.18
SHPRH-211ENST00000629427 BICDL1Q6ZP65 573 aa13.94□□□□□ -0.18
SHPRH-211ENST00000629427 DEF6Q9H4E7 631 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms