RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 EHBP1L1Q8N3D4 1523 aa15.74■□□□□ 0.11
SYNGAP1-208ENST00000629380 CUL7Q14999 1698 aa15.74■□□□□ 0.11
SYNGAP1-208ENST00000629380 JMYQ8N9B5 988 aa15.74■□□□□ 0.11
SYNGAP1-208ENST00000629380 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-208ENST00000629380 RRP1P56182 461 aaKnown RBP15.74■□□□□ 0.11
SYNGAP1-208ENST00000629380 CT47B1P0C2W7 299 aaPredicted RBP15.74■□□□□ 0.11
SYNGAP1-208ENST00000629380 ZNF396Q96N95 335 aaPredicted RBP15.73■□□□□ 0.11
SYNGAP1-208ENST00000629380 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
SYNGAP1-208ENST00000629380 DNAI2Q9GZS0 605 aa15.73■□□□□ 0.11
SYNGAP1-208ENST00000629380 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
SYNGAP1-208ENST00000629380 USP8P40818 1118 aa15.72■□□□□ 0.11
SYNGAP1-208ENST00000629380 NEFHP12036 1026 aa15.72■□□□□ 0.11
SYNGAP1-208ENST00000629380 MINK1Q8N4C8 1332 aaPredicted RBP15.72■□□□□ 0.11
SYNGAP1-208ENST00000629380 MBD3O95983 291 aa15.72■□□□□ 0.11
SYNGAP1-208ENST00000629380 CAVIN1Q6NZI2 390 aaKnown RBP15.71■□□□□ 0.11
SYNGAP1-208ENST00000629380 SDF4Q9BRK5 362 aa15.71■□□□□ 0.11
SYNGAP1-208ENST00000629380 PDE4AP27815 886 aa15.71■□□□□ 0.11
SYNGAP1-208ENST00000629380 FEZ1Q99689 392 aa15.71■□□□□ 0.11
SYNGAP1-208ENST00000629380 CNTROBQ8N137 903 aa15.71■□□□□ 0.11
SYNGAP1-208ENST00000629380 RAPGEF4Q8WZA2 1011 aa15.71■□□□□ 0.11
SYNGAP1-208ENST00000629380 EIF3JO75822 258 aaKnown RBP15.71■□□□□ 0.11
SYNGAP1-208ENST00000629380 SMC2O95347 1197 aa15.71■□□□□ 0.11
SYNGAP1-208ENST00000629380 TBC1D2BQ9UPU7 963 aa15.71■□□□□ 0.1
SYNGAP1-208ENST00000629380 FGD6Q6ZV73 1430 aa15.7■□□□□ 0.1
SYNGAP1-208ENST00000629380 ERLIN1O75477 346 aa15.7■□□□□ 0.1
SYNGAP1-208ENST00000629380 KRT18P05783 430 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-208ENST00000629380 CFAP65Q6ZU64 1925 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-208ENST00000629380 NESP48681 1621 aa15.7■□□□□ 0.1
SYNGAP1-208ENST00000629380 SLC26A8Q96RN1 970 aa15.7■□□□□ 0.1
SYNGAP1-208ENST00000629380 IKQ13123 557 aaPredicted RBP15.69■□□□□ 0.1
SYNGAP1-208ENST00000629380 DZIP1LQ8IYY4 767 aaKnown RBP15.69■□□□□ 0.1
SYNGAP1-208ENST00000629380 TRIM5Q9C035 493 aa15.69■□□□□ 0.1
SYNGAP1-208ENST00000629380 ANKRD50Q9ULJ7 1429 aa15.69■□□□□ 0.1
SYNGAP1-208ENST00000629380 TAF3Q5VWG9 929 aa15.69■□□□□ 0.1
SYNGAP1-208ENST00000629380 DACH1Q9UI36 760 aa15.68■□□□□ 0.1
SYNGAP1-208ENST00000629380 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
SYNGAP1-208ENST00000629380 DYDC1Q8WWB3 177 aa15.68■□□□□ 0.1
SYNGAP1-208ENST00000629380 SYTL4Q96C24 671 aaPredicted RBP15.68■□□□□ 0.1
SYNGAP1-208ENST00000629380 GNL3LQ9NVN8 582 aaKnown RBP15.68■□□□□ 0.1
SYNGAP1-208ENST00000629380 RRP7AQ9Y3A4 280 aaKnown RBP15.68■□□□□ 0.1
SYNGAP1-208ENST00000629380 STK11IPQ8N1F8 1099 aa15.68■□□□□ 0.1
SYNGAP1-208ENST00000629380 MCM2P49736 904 aa15.68■□□□□ 0.1
SYNGAP1-208ENST00000629380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.67■□□□□ 0.1
SYNGAP1-208ENST00000629380 PROSER2Q86WR7 435 aaPredicted RBP15.67■□□□□ 0.1
SYNGAP1-208ENST00000629380 CCDC91Q7Z6B0 441 aa15.67■□□□□ 0.1
SYNGAP1-208ENST00000629380 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
SYNGAP1-208ENST00000629380 ANKLE2Q86XL3 938 aa15.67■□□□□ 0.1
SYNGAP1-208ENST00000629380 CDC45O75419 566 aa15.66■□□□□ 0.1
SYNGAP1-208ENST00000629380 FKBP5Q13451 457 aaPredicted RBP15.66■□□□□ 0.1
SYNGAP1-208ENST00000629380 HSP90AB3PQ58FF7 597 aa15.66■□□□□ 0.1
SYNGAP1-208ENST00000629380 TSPY26PQ9H489 355 aa15.66■□□□□ 0.1
SYNGAP1-208ENST00000629380 PLCD4Q9BRC7 762 aa15.65■□□□□ 0.1
SYNGAP1-208ENST00000629380 NCOA2Q15596 1464 aa15.65■□□□□ 0.1
SYNGAP1-208ENST00000629380 EIF2S2P20042 333 aaKnown RBP15.65■□□□□ 0.1
SYNGAP1-208ENST00000629380 TXNDC2Q86VQ3 553 aa15.65■□□□□ 0.1
SYNGAP1-208ENST00000629380 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
SYNGAP1-208ENST00000629380 FANCIQ9NVI1 1328 aa15.65■□□□□ 0.1
SYNGAP1-208ENST00000629380 FOSBP53539 338 aa15.64■□□□□ 0.1
SYNGAP1-208ENST00000629380 TTLL5Q6EMB2 1281 aa15.64■□□□□ 0.1
SYNGAP1-208ENST00000629380 PPFIBP1Q86W92 1011 aa15.64■□□□□ 0.1
SYNGAP1-208ENST00000629380 MRE11P49959 708 aa15.64■□□□□ 0.09
SYNGAP1-208ENST00000629380 CLASRPQ8N2M8 674 aaKnown RBP15.64■□□□□ 0.09
SYNGAP1-208ENST00000629380 CCDC181Q5TID7 509 aa15.64■□□□□ 0.09
SYNGAP1-208ENST00000629380 SLC52A1Q9NWF4 448 aa15.64■□□□□ 0.09
SYNGAP1-208ENST00000629380 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
SYNGAP1-208ENST00000629380 KIF6Q6ZMV9 814 aa15.64■□□□□ 0.09
SYNGAP1-208ENST00000629380 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.64■□□□□ 0.098e-7■■■■□ 22
SYNGAP1-208ENST00000629380 GNAI1P63096 354 aa15.63■□□□□ 0.09
SYNGAP1-208ENST00000629380 ERC1Q8IUD2 1116 aa15.63■□□□□ 0.09
SYNGAP1-208ENST00000629380 ANKRD62A6NC57 917 aa15.63■□□□□ 0.09
SYNGAP1-208ENST00000629380 CBFA2T2O43439 604 aa15.63■□□□□ 0.09
SYNGAP1-208ENST00000629380 C22orf23Q9BZE7 217 aa15.63■□□□□ 0.09
SYNGAP1-208ENST00000629380 DEF6Q9H4E7 631 aa15.63■□□□□ 0.09
SYNGAP1-208ENST00000629380 LRRC9Q6ZRR7 1453 aa15.63■□□□□ 0.09
SYNGAP1-208ENST00000629380 WASHC4Q2M389 1173 aa15.62■□□□□ 0.09
SYNGAP1-208ENST00000629380 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
SYNGAP1-208ENST00000629380 PANK3Q9H999 370 aa15.62■□□□□ 0.09
SYNGAP1-208ENST00000629380 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
SYNGAP1-208ENST00000629380 TSHZ2Q9NRE2 1034 aa15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 KIAA0586Q9BVV6 1533 aa15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 UBTFL1P0CB47 393 aaPredicted RBP15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 ANKRD1Q15327 319 aa15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 HFM1A2PYH4 1435 aa15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 TRIM22Q8IYM9 498 aa15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 STAMBPO95630 424 aa15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
SYNGAP1-208ENST00000629380 CCDC112Q8NEF3 446 aa15.6■□□□□ 0.09
SYNGAP1-208ENST00000629380 CCDC192P0DO97 292 aa15.6■□□□□ 0.09
SYNGAP1-208ENST00000629380 CDKL5O76039 1030 aa15.6■□□□□ 0.09
SYNGAP1-208ENST00000629380 FYB1O15117 783 aa15.6■□□□□ 0.09
SYNGAP1-208ENST00000629380 EPRSP07814 1512 aaKnown RBP15.6■□□□□ 0.09
SYNGAP1-208ENST00000629380 KIF14Q15058 1648 aa15.6■□□□□ 0.09
SYNGAP1-208ENST00000629380 JAKMIP3Q5VZ66 844 aa15.6■□□□□ 0.09
SYNGAP1-208ENST00000629380 NEBLO76041 1014 aa15.6■□□□□ 0.09
SYNGAP1-208ENST00000629380 ST20-MTHFSA0A0A6YYL1 179 aa15.59■□□□□ 0.09
SYNGAP1-208ENST00000629380 FSD1Q9BTV5 496 aa15.59■□□□□ 0.09
SYNGAP1-208ENST00000629380 TROQ12816 1431 aaPredicted RBP15.59■□□□□ 0.09
SYNGAP1-208ENST00000629380 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
SYNGAP1-208ENST00000629380 CRBNQ96SW2 442 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms