RNA–Protein interactions for RNA: ENST00000629113.1

LEMD1-210, Transcript of LEM domain containing 1, human

TSL 4

Gene LEMD1, Length 314 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD1-210	ENST00000629113	CRYBG1	Q9Y4K1	1723 aa		40.64	■■■■■ 4.1
LEMD1-210	ENST00000629113	NRAP	Q86VF7	1730 aa		40.63	■■■■■ 4.09
LEMD1-210	ENST00000629113	ONECUT3	O60422	494 aa	Predicted RBP	40.59	■■■■■ 4.09
LEMD1-210	ENST00000629113	SIN3A	Q96ST3	1273 aa		40.59	■■■■■ 4.09
LEMD1-210	ENST00000629113	COL14A1	Q05707	1796 aa	Known RBP	40.58	■■■■■ 4.09
LEMD1-210	ENST00000629113	NUTM2G	Q5VZR2	741 aa		40.58	■■■■■ 4.09
LEMD1-210	ENST00000629113	L3MBTL2	Q969R5	705 aa		40.58	■■■■■ 4.09
LEMD1-210	ENST00000629113	TOPAZ1	Q8N9V7	1692 aa		40.58	■■■■■ 4.09
LEMD1-210	ENST00000629113	ACE	P12821	1306 aa		40.58	■■■■■ 4.09
LEMD1-210	ENST00000629113	CCDC125	Q86Z20	511 aa		40.57	■■■■■ 4.09
LEMD1-210	ENST00000629113	CCDC61	Q9Y6R9	512 aa		40.57	■■■■■ 4.09
LEMD1-210	ENST00000629113	NBPF8	Q3BBV2	869 aa		40.55	■■■■■ 4.08
LEMD1-210	ENST00000629113	POLR3A	O14802	1390 aa	Predicted RBP	40.53	■■■■■ 4.08
LEMD1-210	ENST00000629113	FAM98C	Q17RN3	349 aa	Known RBP	40.53	■■■■■ 4.08
LEMD1-210	ENST00000629113	PLEKHG3	A1L390	1219 aa		40.52	■■■■■ 4.08
LEMD1-210	ENST00000629113	PRDM11	Q9NQV5	511 aa		40.52	■■■■■ 4.08
LEMD1-210	ENST00000629113	CENPJ	Q9HC77	1338 aa	Predicted RBP	40.51	■■■■■ 4.08
LEMD1-210	ENST00000629113		A0A0G2JS52	829 aa		40.51	■■■■■ 4.08
LEMD1-210	ENST00000629113	MYT1	Q01538	1121 aa		40.51	■■■■■ 4.08
LEMD1-210	ENST00000629113	KRT27	Q7Z3Y8	459 aa		40.5	■■■■■ 4.07
LEMD1-210	ENST00000629113	CHRNA2	Q15822	529 aa		40.49	■■■■■ 4.07
LEMD1-210	ENST00000629113	CABP2	Q9NPB3	220 aa		40.49	■■■■■ 4.07
LEMD1-210	ENST00000629113	BLM	P54132	1417 aa	Predicted RBP	40.49	■■■■■ 4.07
LEMD1-210	ENST00000629113	SRPK2	P78362	688 aa	Known RBP	40.48	■■■■■ 4.07
LEMD1-210	ENST00000629113	NEUROD1	Q13562	356 aa		40.48	■■■■■ 4.07
LEMD1-210	ENST00000629113	KIAA0232	Q92628	1395 aa		40.48	■■■■■ 4.07
LEMD1-210	ENST00000629113	PHRF1	Q9P1Y6	1649 aa	Known RBP	40.47	■■■■■ 4.07
LEMD1-210	ENST00000629113	DEFB132	Q7Z7B7	95 aa		40.47	■■■■■ 4.07
LEMD1-210	ENST00000629113	ZC3H6	P61129	1189 aa	Known RBP	40.46	■■■■■ 4.07
LEMD1-210	ENST00000629113	SPATA31A5	Q5VU36	1347 aa		40.44	■■■■■ 4.06
LEMD1-210	ENST00000629113	SPATA31A7	Q8IWB4	1347 aa		40.44	■■■■■ 4.06
LEMD1-210	ENST00000629113	QRICH2	Q9H0J4	1663 aa		40.44	■■■■■ 4.06
LEMD1-210	ENST00000629113	ZRANB1	Q9UGI0	708 aa		40.43	■■■■■ 4.06
LEMD1-210	ENST00000629113	PPIP5K1	Q6PFW1	1433 aa		40.42	■■■■■ 4.06
LEMD1-210	ENST00000629113	ABTB2	Q8N961	1025 aa		40.4	■■■■■ 4.06
LEMD1-210	ENST00000629113	STRN4	Q9NRL3	753 aa		40.38	■■■■■ 4.05
LEMD1-210	ENST00000629113	FAM182B	Q5T319	152 aa		40.37	■■■■■ 4.05
LEMD1-210	ENST00000629113	TRPM1	Q7Z4N2	1603 aa		40.37	■■■■■ 4.05
LEMD1-210	ENST00000629113	SF3B2	Q13435	895 aa	Known RBP	40.35	■■■■■ 4.05
LEMD1-210	ENST00000629113	CABP1	Q9NZU7	370 aa		40.33	■■■■■ 4.05
LEMD1-210	ENST00000629113	SPATA31A1	Q5TZJ5	1347 aa		40.32	■■■■■ 4.04
LEMD1-210	ENST00000629113	NRK	Q7Z2Y5	1582 aa		40.31	■■■■■ 4.04
LEMD1-210	ENST00000629113	THSD7A	Q9UPZ6	1657 aa		40.3	■■■■■ 4.04
LEMD1-210	ENST00000629113	USP19	O94966	1318 aa		40.29	■■■■■ 4.04
LEMD1-210	ENST00000629113	ROCK2	O75116	1388 aa	Known RBP	40.27	■■■■■ 4.04
LEMD1-210	ENST00000629113	CAMTA1	Q9Y6Y1	1673 aa		40.25	■■■■■ 4.03
LEMD1-210	ENST00000629113	NLRP13	Q86W25	1043 aa		40.25	■■■■■ 4.03
LEMD1-210	ENST00000629113	USP35	Q9P2H5	1018 aa		40.25	■■■■■ 4.03
LEMD1-210	ENST00000629113	EVA1C	P58658	441 aa		40.24	■■■■■ 4.03
LEMD1-210	ENST00000629113	GC	P02774	474 aa		40.23	■■■■■ 4.03
LEMD1-210	ENST00000629113	EVC2	Q86UK5	1308 aa		40.22	■■■■■ 4.03
LEMD1-210	ENST00000629113	USP6	P35125	1406 aa		40.22	■■■■■ 4.03
LEMD1-210	ENST00000629113	SSH2	Q76I76	1423 aa		40.21	■■■■■ 4.03
LEMD1-210	ENST00000629113	CPD	O75976	1380 aa		40.21	■■■■■ 4.03
LEMD1-210	ENST00000629113	LARP1	Q6PKG0	1096 aa	Known RBP	40.2	■■■■■ 4.03
LEMD1-210	ENST00000629113	SRCAP	Q6ZRS2	3230 aa		40.2	■■■■■ 4.03
LEMD1-210	ENST00000629113	LMO7	Q8WWI1	1683 aa		40.19	■■■■■ 4.02
LEMD1-210	ENST00000629113	BAG6	P46379	1132 aa		40.16	■■■■■ 4.02
LEMD1-210	ENST00000629113	NLRP6	P59044	892 aa		40.16	■■■■■ 4.02
LEMD1-210	ENST00000629113	BRD4	O60885	1362 aa	Predicted RBP	40.15	■■■■■ 4.02
LEMD1-210	ENST00000629113	ZBTB7C	A1YPR0	619 aa		40.15	■■■■■ 4.02
LEMD1-210	ENST00000629113	EN1	Q05925	392 aa	Predicted RBP	40.13	■■■■■ 4.01
LEMD1-210	ENST00000629113	RGPD1	P0DJD0	1748 aa		40.11	■■■■■ 4.01
LEMD1-210	ENST00000629113	BARGIN	Q6ZT62	677 aa		40.1	■■■■■ 4.01
LEMD1-210	ENST00000629113	PIK3C2A	O00443	1686 aa		40.09	■■■■■ 4.01
LEMD1-210	ENST00000629113	TCP11L2	Q8N4U5	519 aa		40.08	■■■■■ 4.01
LEMD1-210	ENST00000629113	SLIT3	O75094	1523 aa		40.06	■■■■■ 4
LEMD1-210	ENST00000629113	TNS1	Q9HBL0	1735 aa	Known RBP	40.06	■■■■■ 4
LEMD1-210	ENST00000629113	COL5A2	P05997	1499 aa	Predicted RBP	40.06	■■■■■ 4
LEMD1-210	ENST00000629113	TRIM37	O94972	964 aa		40.05	■■■■■ 4
LEMD1-210	ENST00000629113	AKAP12	Q02952	1782 aa		40.05	■■■■■ 4
LEMD1-210	ENST00000629113	PSD	A5PKW4	1024 aa	Predicted RBP	40.04	■■■■■ 4
LEMD1-210	ENST00000629113	TTC21B	Q7Z4L5	1316 aa		40.04	■■■■■ 4
LEMD1-210	ENST00000629113	FAM196A	Q6ZSG2	479 aa		40.03	■■■■■ 4
LEMD1-210	ENST00000629113	PDE3B	Q13370	1112 aa		40.01	■■■■■ 4
LEMD1-210	ENST00000629113	ZNF692	Q9BU19	519 aa	Predicted RBP	40.01	■■■■■ 4
LEMD1-210	ENST00000629113	CARD11	Q9BXL7	1154 aa		40.01	■■■■■ 4
LEMD1-210	ENST00000629113	AATK	Q6ZMQ8	1374 aa		39.98	■■■■□ 3.99
LEMD1-210	ENST00000629113	COL18A1	P39060	1754 aa		39.98	■■■■□ 3.99
LEMD1-210	ENST00000629113	EZH2	Q15910	746 aa	Known RBP	39.98	■■■■□ 3.99
LEMD1-210	ENST00000629113	SOX12	O15370	315 aa		39.97	■■■■□ 3.99
LEMD1-210	ENST00000629113	CPSF1	Q10570	1443 aa	Known RBP	39.97	■■■■□ 3.99
LEMD1-210	ENST00000629113	AXIN2	Q9Y2T1	843 aa		39.96	■■■■□ 3.99
LEMD1-210	ENST00000629113	THRAP3	Q9Y2W1	955 aa	Known RBP	39.96	■■■■□ 3.99
LEMD1-210	ENST00000629113	DISP2	A7MBM2	1401 aa		39.96	■■■■□ 3.99
LEMD1-210	ENST00000629113	CRB1	P82279	1406 aa		39.95	■■■■□ 3.99
LEMD1-210	ENST00000629113	TONSL	Q96HA7	1378 aa		39.94	■■■■□ 3.98
LEMD1-210	ENST00000629113	KTN1	Q86UP2	1357 aa	Known RBP	39.93	■■■■□ 3.98
LEMD1-210	ENST00000629113	APBA3	O96018	575 aa		39.92	■■■■□ 3.98
LEMD1-210	ENST00000629113	CAMKK2	Q96RR4	588 aa		39.92	■■■■□ 3.98
LEMD1-210	ENST00000629113	TTC21A	Q8NDW8	1320 aa		39.91	■■■■□ 3.98
LEMD1-210	ENST00000629113	RGPD5	Q99666	1765 aa		39.9	■■■■□ 3.98
LEMD1-210	ENST00000629113	SBNO2	Q9Y2G9	1366 aa		39.9	■■■■□ 3.98
LEMD1-210	ENST00000629113	ARHGEF25	Q86VW2	580 aa		39.9	■■■■□ 3.98
LEMD1-210	ENST00000629113	PARP4	Q9UKK3	1724 aa	Known RBP	39.89	■■■■□ 3.98
LEMD1-210	ENST00000629113	TOM1L2	Q6ZVM7	507 aa		39.89	■■■■□ 3.98
LEMD1-210	ENST00000629113	R3HDM1	Q15032	1099 aa	Known RBP	39.87	■■■■□ 3.97
LEMD1-210	ENST00000629113	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	39.87	■■■■□ 3.97
LEMD1-210	ENST00000629113	MON2	Q7Z3U7	1717 aa		39.87	■■■■□ 3.97
LEMD1-210	ENST00000629113	KCNH5	Q8NCM2	988 aa		39.85	■■■■□ 3.97

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms