RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PPIP5K1Q6PFW1 1433 aa15.85■□□□□ 0.13
DDX41-219ENST00000629036 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
DDX41-219ENST00000629036 MYOM1P52179 1685 aa15.85■□□□□ 0.13
DDX41-219ENST00000629036 USP54Q70EL1 1684 aa15.85■□□□□ 0.13
DDX41-219ENST00000629036 PLEKHG3A1L390 1219 aa15.84■□□□□ 0.13
DDX41-219ENST00000629036 TESK2Q96S53 571 aa15.84■□□□□ 0.13
DDX41-219ENST00000629036 NRAPQ86VF7 1730 aa15.84■□□□□ 0.13
DDX41-219ENST00000629036 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
DDX41-219ENST00000629036 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
DDX41-219ENST00000629036 NWD2Q9ULI1 1742 aa15.83■□□□□ 0.13
DDX41-219ENST00000629036 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
DDX41-219ENST00000629036 CABP2Q9NPB3 220 aa15.83■□□□□ 0.12
DDX41-219ENST00000629036 CCDC61Q9Y6R9 512 aa15.83■□□□□ 0.12
DDX41-219ENST00000629036 USP21Q9UK80 565 aa15.82■□□□□ 0.12
DDX41-219ENST00000629036 USP47Q96K76 1375 aa15.82■□□□□ 0.12
DDX41-219ENST00000629036 ACEP12821 1306 aa15.81■□□□□ 0.12
DDX41-219ENST00000629036 USP6P35125 1406 aa15.8■□□□□ 0.12
DDX41-219ENST00000629036 CPSF1Q10570 1443 aaKnown RBP15.8■□□□□ 0.12
DDX41-219ENST00000629036 ARHGEF10O15013 1369 aa15.8■□□□□ 0.12
DDX41-219ENST00000629036 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
DDX41-219ENST00000629036 TRPC5Q9UL62 973 aaPredicted RBP15.79■□□□□ 0.12
DDX41-219ENST00000629036 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
DDX41-219ENST00000629036 SLIT2O94813 1529 aa15.78■□□□□ 0.12
DDX41-219ENST00000629036 BRWD3Q6RI45 1802 aa15.78■□□□□ 0.12
DDX41-219ENST00000629036 COL14A1Q05707 1796 aaKnown RBP15.77■□□□□ 0.12
DDX41-219ENST00000629036 ST20-MTHFSA0A0A6YYL1 179 aa15.77■□□□□ 0.12
DDX41-219ENST00000629036 PSME1Q06323 249 aa15.77■□□□□ 0.12
DDX41-219ENST00000629036 SLIT3O75094 1523 aa15.77■□□□□ 0.11
DDX41-219ENST00000629036 BCL9LQ86UU0 1499 aa15.77■□□□□ 0.11
DDX41-219ENST00000629036 LMO7Q8WWI1 1683 aa15.76■□□□□ 0.11
DDX41-219ENST00000629036 NGDNQ8NEJ9 315 aaKnown RBP15.76■□□□□ 0.11
DDX41-219ENST00000629036 ATRNO75882 1429 aa15.76■□□□□ 0.11
DDX41-219ENST00000629036 CABP1Q9NZU7 370 aa15.75■□□□□ 0.11
DDX41-219ENST00000629036 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
DDX41-219ENST00000629036 CCDC125Q86Z20 511 aa15.74■□□□□ 0.11
DDX41-219ENST00000629036 CABLES1Q8TDN4 633 aa15.74■□□□□ 0.11
DDX41-219ENST00000629036 LRP5O75197 1615 aa15.74■□□□□ 0.11
DDX41-219ENST00000629036 COL18A1P39060 1754 aa15.74■□□□□ 0.11
DDX41-219ENST00000629036 GLI3P10071 1580 aa15.74■□□□□ 0.11
DDX41-219ENST00000629036 USP19O94966 1318 aa15.73■□□□□ 0.11
DDX41-219ENST00000629036 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
DDX41-219ENST00000629036 PUS7Q96PZ0 661 aaKnown RBP15.73■□□□□ 0.11
DDX41-219ENST00000629036 NFAT5O94916 1531 aa15.71■□□□□ 0.11
DDX41-219ENST00000629036 RGPD5Q99666 1765 aa15.7■□□□□ 0.1
DDX41-219ENST00000629036 DEFB132Q7Z7B7 95 aa15.7■□□□□ 0.1
DDX41-219ENST00000629036 A0A1W2PP64 1363 aa15.7■□□□□ 0.1
DDX41-219ENST00000629036 KIF20BQ96Q89 1820 aa15.69■□□□□ 0.1
DDX41-219ENST00000629036 LTN1O94822 1766 aa15.69■□□□□ 0.1
DDX41-219ENST00000629036 NINLQ9Y2I6 1382 aa15.68■□□□□ 0.1
DDX41-219ENST00000629036 BLMP54132 1417 aaPredicted RBP15.68■□□□□ 0.1
DDX41-219ENST00000629036 EDC4Q6P2E9 1401 aaKnown RBP15.67■□□□□ 0.1
DDX41-219ENST00000629036 KTN1Q86UP2 1357 aaKnown RBP15.66■□□□□ 0.1
DDX41-219ENST00000629036 PSDA5PKW4 1024 aaPredicted RBP15.66■□□□□ 0.1
DDX41-219ENST00000629036 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
DDX41-219ENST00000629036 LMOD2Q6P5Q4 547 aa15.66■□□□□ 0.1
DDX41-219ENST00000629036 GJD4Q96KN9 370 aaPredicted RBP15.66■□□□□ 0.1
DDX41-219ENST00000629036 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
DDX41-219ENST00000629036 WNK3Q9BYP7 1800 aa15.66■□□□□ 0.1
DDX41-219ENST00000629036 TTC21BQ7Z4L5 1316 aa15.66■□□□□ 0.1
DDX41-219ENST00000629036 CPDO75976 1380 aa15.65■□□□□ 0.1
DDX41-219ENST00000629036 CAMTA1Q9Y6Y1 1673 aa15.65■□□□□ 0.1
DDX41-219ENST00000629036 OVOS2A0A0J9YW53 1432 aa15.65■□□□□ 0.1
DDX41-219ENST00000629036 OVOS2Q6IE36 1432 aa15.65■□□□□ 0.1
DDX41-219ENST00000629036 KIAA0232Q92628 1395 aa15.64■□□□□ 0.09
DDX41-219ENST00000629036 THSD7AQ9UPZ6 1657 aa15.64■□□□□ 0.09
DDX41-219ENST00000629036 FAM83GA6ND36 823 aa15.64■□□□□ 0.09
DDX41-219ENST00000629036 SF3B2Q13435 895 aaKnown RBP15.64■□□□□ 0.09
DDX41-219ENST00000629036 NUTM2GQ5VZR2 741 aa15.64■□□□□ 0.09
DDX41-219ENST00000629036 USP31Q70CQ4 1352 aa15.63■□□□□ 0.09
DDX41-219ENST00000629036 ANKRD36BQ8N2N9 1353 aa15.63■□□□□ 0.09
DDX41-219ENST00000629036 ABTB2Q8N961 1025 aa15.63■□□□□ 0.09
DDX41-219ENST00000629036 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
DDX41-219ENST00000629036 TTC21AQ8NDW8 1320 aa15.63■□□□□ 0.09
DDX41-219ENST00000629036 ABCC6O95255 1503 aa15.63■□□□□ 0.09
DDX41-219ENST00000629036 ANKRD26Q9UPS8 1709 aa15.63■□□□□ 0.09
DDX41-219ENST00000629036 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
DDX41-219ENST00000629036 HSPA5P11021 654 aaKnown RBP15.62■□□□□ 0.09
DDX41-219ENST00000629036 TMF1P82094 1093 aa15.61■□□□□ 0.09
DDX41-219ENST00000629036 UNC5CLQ8IV45 518 aa15.61■□□□□ 0.09
DDX41-219ENST00000629036 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
DDX41-219ENST00000629036 COL5A2P05997 1499 aaPredicted RBP15.59■□□□□ 0.09
DDX41-219ENST00000629036 GCP02774 474 aa15.58■□□□□ 0.08
DDX41-219ENST00000629036 EIF4G2P78344 907 aaKnown RBP eCLIP15.58■□□□□ 0.08
DDX41-219ENST00000629036 NLRP13Q86W25 1043 aa15.58■□□□□ 0.08
DDX41-219ENST00000629036 NME9Q86XW9 330 aa15.58■□□□□ 0.08
DDX41-219ENST00000629036 TMC1Q8TDI8 760 aa15.58■□□□□ 0.08
DDX41-219ENST00000629036 C11orf95C9JLR9 678 aaPredicted RBP15.57■□□□□ 0.08
DDX41-219ENST00000629036 VPS72Q15906 364 aa15.57■□□□□ 0.08
DDX41-219ENST00000629036 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
DDX41-219ENST00000629036 NLRP6P59044 892 aa15.56■□□□□ 0.08
DDX41-219ENST00000629036 ZC3H6P61129 1189 aaKnown RBP15.56■□□□□ 0.08
DDX41-219ENST00000629036 CHRNA2Q15822 529 aa15.56■□□□□ 0.08
DDX41-219ENST00000629036 PRDM11Q9NQV5 511 aa15.56■□□□□ 0.08
DDX41-219ENST00000629036 BTG4Q9NY30 223 aa15.56■□□□□ 0.08
DDX41-219ENST00000629036 TERF2IPQ9NYB0 399 aa15.56■□□□□ 0.08
DDX41-219ENST00000629036 PEAK1Q9H792 1746 aa15.56■□□□□ 0.08
DDX41-219ENST00000629036 PARP4Q9UKK3 1724 aaKnown RBP15.56■□□□□ 0.08
DDX41-219ENST00000629036 AATKQ6ZMQ8 1374 aa15.55■□□□□ 0.08
DDX41-219ENST00000629036 HDGFL2Q7Z4V5 671 aaPredicted RBP15.55■□□□□ 0.08
DDX41-219ENST00000629036 SEPT12Q8IYM1 358 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms