RNA–Protein interactions for RNA: ENST00000628368.1

CPS1-IT1-201, CPS1 intronic transcript 1, humanhuman

BASIC

Gene CPS1-IT1, Length 2,306 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-IT1-201ENST00000628368 WDR43Q15061 677 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPS1-IT1-201ENST00000628368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPS1-IT1-201ENST00000628368 ITSN1Q15811 1721 aa7.79□□□□□ -1.16
CPS1-IT1-201ENST00000628368 MTHFSP49914 203 aa7.79□□□□□ -1.16
CPS1-IT1-201ENST00000628368 ACEP12821 1306 aa7.79□□□□□ -1.16
CPS1-IT1-201ENST00000628368 SENP3-EIF4A1A0A087X0R7 540 aa7.79□□□□□ -1.16
CPS1-IT1-201ENST00000628368 RGPD8O14715 1765 aaPredicted RBP7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 NKTRP30414 1462 aaKnown RBP7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 NALCNQ8IZF0 1738 aa7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 FMN2Q9NZ56 1722 aa7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 NWD1Q149M9 1564 aa7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 ANKARQ7Z5J8 1434 aa7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 HSPA2P54652 639 aa7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 RBM33Q96EV2 1170 aaKnown RBP7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 NME9Q86XW9 330 aa7.78□□□□□ -1.16
CPS1-IT1-201ENST00000628368 SHPRHQ149N8 1683 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 LMTK3Q96Q04 1460 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 NRKQ7Z2Y5 1582 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 TTC21BQ7Z4L5 1316 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 USP6P35125 1406 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 ADGRL3Q9HAR2 1447 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 PMFBP1Q8TBY8 1022 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 CFAP53Q96M91 514 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 ZRANB1Q9UGI0 708 aa7.77□□□□□ -1.17
CPS1-IT1-201ENST00000628368 SSH2Q76I76 1423 aa7.76□□□□□ -1.17
CPS1-IT1-201ENST00000628368 SLC4A2P04920 1241 aa7.76□□□□□ -1.17
CPS1-IT1-201ENST00000628368 PROSER2Q86WR7 435 aaPredicted RBP7.75□□□□□ -1.17
CPS1-IT1-201ENST00000628368 SALL2Q9Y467 1007 aaPredicted RBP7.75□□□□□ -1.17
CPS1-IT1-201ENST00000628368 FBLN1P23142 703 aa7.75□□□□□ -1.17
CPS1-IT1-201ENST00000628368 NGDNQ8NEJ9 315 aaKnown RBP7.75□□□□□ -1.17
CPS1-IT1-201ENST00000628368 COG3Q96JB2 828 aa7.75□□□□□ -1.17
CPS1-IT1-201ENST00000628368 POLKQ9UBT6 870 aa7.75□□□□□ -1.17
CPS1-IT1-201ENST00000628368 SMG6Q86US8 1419 aaKnown RBP7.75□□□□□ -1.17
CPS1-IT1-201ENST00000628368 COL3A1P02461 1466 aaPredicted RBP7.75□□□□□ -1.17
CPS1-IT1-201ENST00000628368 PNPLA6Q8IY17 1366 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 CCDC146Q8IYE0 955 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 MAP2P11137 1827 aaKnown RBP7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 STRCQ7RTU9 1775 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 AATKQ6ZMQ8 1374 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 PDE3BQ13370 1112 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 C14orf37Q86TY3 774 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 NUDCQ9Y266 331 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 STRCP1A6NGW2 1772 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 TTC21AQ8NDW8 1320 aa7.74□□□□□ -1.17
CPS1-IT1-201ENST00000628368 PHF8Q9UPP1 1060 aa7.73□□□□□ -1.17
CPS1-IT1-201ENST00000628368 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
CPS1-IT1-201ENST00000628368 OVOS2A0A0J9YW53 1432 aa7.73□□□□□ -1.17
CPS1-IT1-201ENST00000628368 OVOS2Q6IE36 1432 aa7.73□□□□□ -1.17
CPS1-IT1-201ENST00000628368 APAF1O14727 1248 aa7.73□□□□□ -1.17
CPS1-IT1-201ENST00000628368 MYT1Q01538 1121 aa7.73□□□□□ -1.17
CPS1-IT1-201ENST00000628368 RNF39Q9H2S5 420 aa7.73□□□□□ -1.17
CPS1-IT1-201ENST00000628368 PLSCR2Q9NRY7 297 aa7.73□□□□□ -1.17
CPS1-IT1-201ENST00000628368 C19orf44Q9H6X5 657 aa7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 EMILIN1Q9Y6C2 1016 aa7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 ZNF521Q96K83 1311 aa7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 DIAPH1O60610 1272 aaKnown RBP7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 U2AF1L5P0DN76 240 aaPredicted RBP7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 U2AF1Q01081 240 aaKnown RBP eCLIP7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 ESCO1Q5FWF5 840 aa7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 RUNDC1Q96C34 613 aa7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
CPS1-IT1-201ENST00000628368 TMEM94Q12767 1356 aa7.71□□□□□ -1.17
CPS1-IT1-201ENST00000628368 USP31Q70CQ4 1352 aa7.71□□□□□ -1.17
CPS1-IT1-201ENST00000628368 NCOA3Q9Y6Q9 1424 aa7.71□□□□□ -1.17
CPS1-IT1-201ENST00000628368 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
CPS1-IT1-201ENST00000628368 RRS1Q15050 365 aaKnown RBP7.71□□□□□ -1.18
CPS1-IT1-201ENST00000628368 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
CPS1-IT1-201ENST00000628368 PIK3C2AO00443 1686 aa7.71□□□□□ -1.18
CPS1-IT1-201ENST00000628368 U2SURPO15042 1029 aaKnown RBP7.7□□□□□ -1.18
CPS1-IT1-201ENST00000628368 CDK12Q9NYV4 1490 aaPredicted RBP7.7□□□□□ -1.18
CPS1-IT1-201ENST00000628368 ORAI2Q96SN7 254 aa7.7□□□□□ -1.18
CPS1-IT1-201ENST00000628368 TCP11L2Q8N4U5 519 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 PLEKHF1Q96S99 279 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 IQSEC2Q5JU85 1478 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 C1orf167Q5SNV9 1468 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 NEFLP07196 543 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 IL13P35225 146 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 NLRP6P59044 892 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 PSME1Q06323 249 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 GOLGA2Q08379 1002 aa7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 MARF1Q9Y4F3 1742 aaKnown RBP7.69□□□□□ -1.18
CPS1-IT1-201ENST00000628368 USP54Q70EL1 1684 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 DCCP43146 1447 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 PAK3O75914 559 aaPredicted RBP7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 ATF3P18847 181 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 ABTB2Q8N961 1025 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 XIRP1Q702N8 1843 aaKnown RBP7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 FOXO3O43524 673 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 FCHSD2O94868 740 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 SLFN5Q08AF3 891 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 NUTM2GQ5VZR2 741 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 WWC1Q8IX03 1113 aa7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 RRP7AQ9Y3A4 280 aaKnown RBP7.68□□□□□ -1.18
CPS1-IT1-201ENST00000628368 MST1RQ04912 1400 aa7.67□□□□□ -1.18
CPS1-IT1-201ENST00000628368 PEAK1Q9H792 1746 aa7.67□□□□□ -1.18
CPS1-IT1-201ENST00000628368 RNF123Q5XPI4 1314 aa7.67□□□□□ -1.18
CPS1-IT1-201ENST00000628368 CCDC27Q2M243 656 aa7.67□□□□□ -1.18
CPS1-IT1-201ENST00000628368 TRMT2AQ8IZ69 625 aaKnown RBP7.67□□□□□ -1.18
CPS1-IT1-201ENST00000628368 PNNQ9H307 717 aaKnown RBP7.67□□□□□ -1.18
CPS1-IT1-201ENST00000628368 KIF1AQ12756 1690 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms