RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 FYB1O15117 783 aa24.48■■□□□ 1.51
PTBP1-220ENST00000627714 HDGFL2Q7Z4V5 671 aaPredicted RBP24.48■■□□□ 1.51
PTBP1-220ENST00000627714 GGNBP2Q9H3C7 697 aa24.48■■□□□ 1.51
PTBP1-220ENST00000627714 UPF2Q9HAU5 1272 aaKnown RBP24.48■■□□□ 1.51
PTBP1-220ENST00000627714 U2SURPO15042 1029 aaKnown RBP24.47■■□□□ 1.51
PTBP1-220ENST00000627714 PRAM1Q96QH2 718 aa24.47■■□□□ 1.51
PTBP1-220ENST00000627714 ALKQ9UM73 1620 aa24.47■■□□□ 1.51
PTBP1-220ENST00000627714 PNPLA6Q8IY17 1366 aa24.47■■□□□ 1.51
PTBP1-220ENST00000627714 KIF20BQ96Q89 1820 aa24.47■■□□□ 1.51
PTBP1-220ENST00000627714 GSE1Q14687 1217 aa24.47■■□□□ 1.51
PTBP1-220ENST00000627714 PDZRN3Q9UPQ7 1066 aa24.47■■□□□ 1.51
PTBP1-220ENST00000627714 TNNQ9UQP3 1299 aa24.47■■□□□ 1.51
PTBP1-220ENST00000627714 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
PTBP1-220ENST00000627714 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
PTBP1-220ENST00000627714 TRIM35Q9UPQ4 493 aa24.45■■□□□ 1.5
PTBP1-220ENST00000627714 MINK1Q8N4C8 1332 aaPredicted RBP24.45■■□□□ 1.5
PTBP1-220ENST00000627714 SMC4Q9NTJ3 1288 aa24.44■■□□□ 1.5
PTBP1-220ENST00000627714 DLC1Q96QB1 1528 aa24.43■■□□□ 1.5
PTBP1-220ENST00000627714 DIAPH1O60610 1272 aaKnown RBP24.43■■□□□ 1.5
PTBP1-220ENST00000627714 EXOSC9Q06265 439 aaKnown RBP24.43■■□□□ 1.5
PTBP1-220ENST00000627714 DDX19BQ9UMR2 479 aa24.43■■□□□ 1.5
PTBP1-220ENST00000627714 TSR2Q969E8 191 aaKnown RBP24.42■■□□□ 1.5
PTBP1-220ENST00000627714 SEC24BO95487 1268 aa24.42■■□□□ 1.5
PTBP1-220ENST00000627714 HDAC1Q13547 482 aaPredicted RBP24.41■■□□□ 1.5
PTBP1-220ENST00000627714 REREQ9P2R6 1566 aa24.41■■□□□ 1.5
PTBP1-220ENST00000627714 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
PTBP1-220ENST00000627714 ATP7BP35670 1465 aa24.4■■□□□ 1.5
PTBP1-220ENST00000627714 ATF7IPQ6VMQ6 1270 aa24.39■■□□□ 1.5
PTBP1-220ENST00000627714 KIF16BQ96L93 1317 aa24.39■■□□□ 1.49
PTBP1-220ENST00000627714 TBC1D32Q96NH3 1257 aa24.39■■□□□ 1.49
PTBP1-220ENST00000627714 CDK19Q9BWU1 502 aa24.39■■□□□ 1.49
PTBP1-220ENST00000627714 TRIM27P14373 513 aa24.38■■□□□ 1.49
PTBP1-220ENST00000627714 FCHSD2O94868 740 aa24.38■■□□□ 1.49
PTBP1-220ENST00000627714 RIPK4P57078 832 aa24.38■■□□□ 1.49
PTBP1-220ENST00000627714 SSH1Q8WYL5 1049 aa24.38■■□□□ 1.49
PTBP1-220ENST00000627714 IPO8O15397 1037 aaKnown RBP24.37■■□□□ 1.49
PTBP1-220ENST00000627714 AGLP35573 1532 aa24.36■■□□□ 1.49
PTBP1-220ENST00000627714 ALDH1L2Q3SY69 923 aa24.35■■□□□ 1.49
PTBP1-220ENST00000627714 ZNF428Q96B54 188 aa24.35■■□□□ 1.49
PTBP1-220ENST00000627714 CABP1Q9NZU7 370 aa24.34■■□□□ 1.49
PTBP1-220ENST00000627714 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
PTBP1-220ENST00000627714 LRRC7Q96NW7 1537 aa24.34■■□□□ 1.49
PTBP1-220ENST00000627714 FRAT2O75474 233 aaPredicted RBP24.34■■□□□ 1.49
PTBP1-220ENST00000627714 ITPRIPQ8IWB1 547 aa24.33■■□□□ 1.49
PTBP1-220ENST00000627714 FAM135BQ49AJ0 1406 aa24.33■■□□□ 1.49
PTBP1-220ENST00000627714 PPIP5K1Q6PFW1 1433 aa24.33■■□□□ 1.49
PTBP1-220ENST00000627714 FBXO31Q5XUX0 539 aaPredicted RBP24.33■■□□□ 1.48
PTBP1-220ENST00000627714 NOB1Q9ULX3 412 aaKnown RBP24.31■■□□□ 1.48
PTBP1-220ENST00000627714 SPATA31D1Q6ZQQ2 1576 aa24.31■■□□□ 1.48
PTBP1-220ENST00000627714 SETD1AO15047 1707 aaKnown RBP24.31■■□□□ 1.48
PTBP1-220ENST00000627714 BRPF1P55201 1214 aaPredicted RBP24.3■■□□□ 1.48
PTBP1-220ENST00000627714 A2ML1A8K2U0 1454 aa24.3■■□□□ 1.48
PTBP1-220ENST00000627714 SMC5Q8IY18 1101 aa24.3■■□□□ 1.48
PTBP1-220ENST00000627714 CALD1Q05682 793 aaKnown RBP24.29■■□□□ 1.48
PTBP1-220ENST00000627714 RSPH6AQ9H0K4 717 aa24.29■■□□□ 1.48
PTBP1-220ENST00000627714 ZBTB40Q9NUA8 1239 aa24.28■■□□□ 1.48
PTBP1-220ENST00000627714 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
PTBP1-220ENST00000627714 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
PTBP1-220ENST00000627714 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
PTBP1-220ENST00000627714 TMEM57Q8N5G2 664 aa24.27■■□□□ 1.48
PTBP1-220ENST00000627714 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
PTBP1-220ENST00000627714 RIMS2Q9UQ26 1411 aa24.27■■□□□ 1.48
PTBP1-220ENST00000627714 CHMP4BQ9H444 224 aaKnown RBP24.26■■□□□ 1.47
PTBP1-220ENST00000627714 POLKQ9UBT6 870 aa24.26■■□□□ 1.47
PTBP1-220ENST00000627714 EDC4Q6P2E9 1401 aaKnown RBP24.26■■□□□ 1.47
PTBP1-220ENST00000627714 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
PTBP1-220ENST00000627714 ANTXR1Q9H6X2 564 aa24.25■■□□□ 1.47
PTBP1-220ENST00000627714 CDK12Q9NYV4 1490 aaPredicted RBP24.24■■□□□ 1.47
PTBP1-220ENST00000627714 CPSF1Q10570 1443 aaKnown RBP24.24■■□□□ 1.47
PTBP1-220ENST00000627714 NFE2L2Q16236 605 aa24.23■■□□□ 1.47
PTBP1-220ENST00000627714 MAP2P11137 1827 aaKnown RBP24.23■■□□□ 1.47
PTBP1-220ENST00000627714 TBC1D2Q9BYX2 928 aa24.23■■□□□ 1.47
PTBP1-220ENST00000627714 DIP2BQ9P265 1576 aa24.22■■□□□ 1.47
PTBP1-220ENST00000627714 AATKQ6ZMQ8 1374 aa24.22■■□□□ 1.47
PTBP1-220ENST00000627714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.21■■□□□ 1.47
PTBP1-220ENST00000627714 IL27Q8NEV9 243 aa24.21■■□□□ 1.47
PTBP1-220ENST00000627714 ARHGAP45Q92619 1136 aa24.21■■□□□ 1.47
PTBP1-220ENST00000627714 C22orf23Q9BZE7 217 aa24.2■■□□□ 1.47
PTBP1-220ENST00000627714 SLKQ9H2G2 1235 aaPredicted RBP24.2■■□□□ 1.46
PTBP1-220ENST00000627714 NUCB1Q02818 461 aa24.19■■□□□ 1.46
PTBP1-220ENST00000627714 WAPLQ7Z5K2 1190 aa24.19■■□□□ 1.46
PTBP1-220ENST00000627714 IFT57Q9NWB7 429 aa24.19■■□□□ 1.46
PTBP1-220ENST00000627714 PIK3R4Q99570 1358 aa24.19■■□□□ 1.46
PTBP1-220ENST00000627714 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
PTBP1-220ENST00000627714 GNAI1P63096 354 aa24.18■■□□□ 1.46
PTBP1-220ENST00000627714 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.18■■□□□ 1.46
PTBP1-220ENST00000627714 KNDC1Q76NI1 1749 aa24.18■■□□□ 1.46
PTBP1-220ENST00000627714 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
PTBP1-220ENST00000627714 WASLO00401 505 aaPredicted RBP24.17■■□□□ 1.46
PTBP1-220ENST00000627714 LMOD3Q0VAK6 560 aa24.17■■□□□ 1.46
PTBP1-220ENST00000627714 FAM69CQ0P6D2 419 aa24.16■■□□□ 1.46
PTBP1-220ENST00000627714 MON2Q7Z3U7 1717 aa24.16■■□□□ 1.46
PTBP1-220ENST00000627714 IL13P35225 146 aa24.15■■□□□ 1.46
PTBP1-220ENST00000627714 SIRT1Q96EB6 747 aa24.15■■□□□ 1.46
PTBP1-220ENST00000627714 VAMP4O75379 141 aa24.14■■□□□ 1.46
PTBP1-220ENST00000627714 MFAP1P55081 439 aaKnown RBP24.14■■□□□ 1.46
PTBP1-220ENST00000627714 GCC1Q96CN9 775 aa24.14■■□□□ 1.45
PTBP1-220ENST00000627714 TECPR2O15040 1411 aa24.13■■□□□ 1.45
PTBP1-220ENST00000627714 ZNF853P0CG23 659 aa24.13■■□□□ 1.45
PTBP1-220ENST00000627714 MRPL50Q8N5N7 158 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms