RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 ATP10DQ9P241 1426 aa13.04□□□□□ -0.32
SPTAN1-212ENST00000627441 GPR162Q16538 588 aa13.03□□□□□ -0.32
SPTAN1-212ENST00000627441 ANKRD30AQ9BXX3 1397 aa13.03□□□□□ -0.32
SPTAN1-212ENST00000627441 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
SPTAN1-212ENST00000627441 TECPR2O15040 1411 aa13.01□□□□□ -0.33
SPTAN1-212ENST00000627441 PEAK1Q9H792 1746 aa13□□□□□ -0.33
SPTAN1-212ENST00000627441 TRPM3Q9HCF6 1732 aaPredicted RBP13□□□□□ -0.33
SPTAN1-212ENST00000627441 RRBP1Q9P2E9 1410 aaKnown RBP13□□□□□ -0.33
SPTAN1-212ENST00000627441 LMOD2Q6P5Q4 547 aa13□□□□□ -0.33
SPTAN1-212ENST00000627441 TNS4Q8IZW8 715 aa13□□□□□ -0.33
SPTAN1-212ENST00000627441 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
SPTAN1-212ENST00000627441 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
SPTAN1-212ENST00000627441 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
SPTAN1-212ENST00000627441 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
SPTAN1-212ENST00000627441 PCNTO95613 3336 aa12.99□□□□□ -0.33
SPTAN1-212ENST00000627441 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
SPTAN1-212ENST00000627441 DNAJC5GQ8N7S2 189 aa12.98□□□□□ -0.33
SPTAN1-212ENST00000627441 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
SPTAN1-212ENST00000627441 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
SPTAN1-212ENST00000627441 PTF1AQ7RTS3 328 aa12.97□□□□□ -0.33
SPTAN1-212ENST00000627441 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
SPTAN1-212ENST00000627441 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
SPTAN1-212ENST00000627441 PCDH10Q9P2E7 1040 aa12.96□□□□□ -0.33
SPTAN1-212ENST00000627441 WDR90Q96KV7 1748 aa12.96□□□□□ -0.34
SPTAN1-212ENST00000627441 PROM2Q8N271 834 aa12.95□□□□□ -0.34
SPTAN1-212ENST00000627441 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-212ENST00000627441 ARXQ96QS3 562 aa12.95□□□□□ -0.34
SPTAN1-212ENST00000627441 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
SPTAN1-212ENST00000627441 PLEKHH1Q9ULM0 1364 aa12.94□□□□□ -0.34
SPTAN1-212ENST00000627441 BCL11BQ9C0K0 894 aaPredicted RBP12.94□□□□□ -0.34
SPTAN1-212ENST00000627441 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
SPTAN1-212ENST00000627441 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
SPTAN1-212ENST00000627441 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-212ENST00000627441 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
SPTAN1-212ENST00000627441 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
SPTAN1-212ENST00000627441 NRXN1Q9ULB1 1477 aa12.92□□□□□ -0.34
SPTAN1-212ENST00000627441 YBX3P16989 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPTAN1-212ENST00000627441 PDE3BQ13370 1112 aa12.92□□□□□ -0.34
SPTAN1-212ENST00000627441 WAPLQ7Z5K2 1190 aa12.92□□□□□ -0.34
SPTAN1-212ENST00000627441 KIF1BO60333 1816 aa12.92□□□□□ -0.34
SPTAN1-212ENST00000627441 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
SPTAN1-212ENST00000627441 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
SPTAN1-212ENST00000627441 STRN4Q9NRL3 753 aa12.91□□□□□ -0.34
SPTAN1-212ENST00000627441 ADCY9O60503 1353 aa12.91□□□□□ -0.34
SPTAN1-212ENST00000627441 PLSCR1O15162 318 aa12.9□□□□□ -0.34
SPTAN1-212ENST00000627441 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
SPTAN1-212ENST00000627441 COL24A1Q17RW2 1714 aa12.9□□□□□ -0.34
SPTAN1-212ENST00000627441 PHRF1Q9P1Y6 1649 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-212ENST00000627441 CHRNA2Q15822 529 aa12.89□□□□□ -0.35
SPTAN1-212ENST00000627441 TOPAZ1Q8N9V7 1692 aa12.89□□□□□ -0.35
SPTAN1-212ENST00000627441 PPLO60437 1756 aa12.89□□□□□ -0.35
SPTAN1-212ENST00000627441 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
SPTAN1-212ENST00000627441 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
SPTAN1-212ENST00000627441 APLP1P51693 650 aa12.88□□□□□ -0.35
SPTAN1-212ENST00000627441 HTRA3P83110 453 aa12.88□□□□□ -0.35
SPTAN1-212ENST00000627441 PSME1Q06323 249 aa12.88□□□□□ -0.35
SPTAN1-212ENST00000627441 SLC15A2Q16348 729 aa12.88□□□□□ -0.35
SPTAN1-212ENST00000627441 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
SPTAN1-212ENST00000627441 KIF3CO14782 793 aa12.87□□□□□ -0.35
SPTAN1-212ENST00000627441 STK32BQ9NY57 414 aa12.87□□□□□ -0.35
SPTAN1-212ENST00000627441 BARGINQ6ZT62 677 aa12.86□□□□□ -0.35
SPTAN1-212ENST00000627441 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
SPTAN1-212ENST00000627441 KIAA0232Q92628 1395 aa12.85□□□□□ -0.35
SPTAN1-212ENST00000627441 OVOS2A0A0G2JMS6 1433 aa12.85□□□□□ -0.35
SPTAN1-212ENST00000627441 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
SPTAN1-212ENST00000627441 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
SPTAN1-212ENST00000627441 SSH2Q76I76 1423 aa12.85□□□□□ -0.35
SPTAN1-212ENST00000627441 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
SPTAN1-212ENST00000627441 PMFBP1Q8TBY8 1022 aa12.83□□□□□ -0.36
SPTAN1-212ENST00000627441 STK26Q9P289 416 aa12.83□□□□□ -0.36
SPTAN1-212ENST00000627441 WWC3Q9ULE0 1092 aa12.83□□□□□ -0.36
SPTAN1-212ENST00000627441 AKAP12Q02952 1782 aa12.83□□□□□ -0.36
SPTAN1-212ENST00000627441 ATP7BP35670 1465 aa12.83□□□□□ -0.36
SPTAN1-212ENST00000627441 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
SPTAN1-212ENST00000627441 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
SPTAN1-212ENST00000627441 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
SPTAN1-212ENST00000627441 JMYQ8N9B5 988 aa12.82□□□□□ -0.36
SPTAN1-212ENST00000627441 WNK3Q9BYP7 1800 aa12.82□□□□□ -0.36
SPTAN1-212ENST00000627441 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
SPTAN1-212ENST00000627441 KLRG1Q96E93 195 aa12.81□□□□□ -0.36
SPTAN1-212ENST00000627441 ARHGEF28Q8N1W1 1705 aaKnown RBP12.8□□□□□ -0.36
SPTAN1-212ENST00000627441 NUP155O75694 1391 aa12.79□□□□□ -0.36
SPTAN1-212ENST00000627441 ZNF827Q17R98 1081 aa12.78□□□□□ -0.36
SPTAN1-212ENST00000627441 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
SPTAN1-212ENST00000627441 QSER1Q2KHR3 1735 aa12.78□□□□□ -0.36
SPTAN1-212ENST00000627441 GRIN3BO60391 1043 aa12.77□□□□□ -0.37
SPTAN1-212ENST00000627441 ZC3H6P61129 1189 aaKnown RBP12.77□□□□□ -0.37
SPTAN1-212ENST00000627441 VGFO15240 615 aaPredicted RBP12.76□□□□□ -0.37
SPTAN1-212ENST00000627441 DHX57Q6P158 1386 aaKnown RBP12.75□□□□□ -0.37
SPTAN1-212ENST00000627441 VPS8Q8N3P4 1428 aa12.74□□□□□ -0.37
SPTAN1-212ENST00000627441 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
SPTAN1-212ENST00000627441 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
SPTAN1-212ENST00000627441 AATKQ6ZMQ8 1374 aa12.72□□□□□ -0.37
SPTAN1-212ENST00000627441 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
SPTAN1-212ENST00000627441 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-212ENST00000627441 HSPA1AP0DMV8 641 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-212ENST00000627441 HSPA1BP0DMV9 641 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-212ENST00000627441 EVA1CP58658 441 aa12.72□□□□□ -0.37
SPTAN1-212ENST00000627441 MARCH10Q8NA82 808 aaPredicted RBP12.72□□□□□ -0.37
SPTAN1-212ENST00000627441 NHSQ6T4R5 1651 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms