RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 VPS72Q15906 364 aa13.65□□□□□ -0.22
CHD2-210ENST00000627200 CDK19Q9BWU1 502 aa13.65□□□□□ -0.22
CHD2-210ENST00000627200 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
CHD2-210ENST00000627200 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
CHD2-210ENST00000627200 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
CHD2-210ENST00000627200 SIN3AQ96ST3 1273 aa13.63□□□□□ -0.23
CHD2-210ENST00000627200 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
CHD2-210ENST00000627200 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
CHD2-210ENST00000627200 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
CHD2-210ENST00000627200 NUTM2GQ5VZR2 741 aa13.62□□□□□ -0.23
CHD2-210ENST00000627200 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
CHD2-210ENST00000627200 ACEP12821 1306 aa13.62□□□□□ -0.23
CHD2-210ENST00000627200 NRKQ7Z2Y5 1582 aa13.61□□□□□ -0.23
CHD2-210ENST00000627200 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
CHD2-210ENST00000627200 KIAA0232Q92628 1395 aa13.6□□□□□ -0.23
CHD2-210ENST00000627200 PPIP5K1Q6PFW1 1433 aa13.59□□□□□ -0.23
CHD2-210ENST00000627200 A0A0G2JS52 829 aa13.59□□□□□ -0.23
CHD2-210ENST00000627200 MYT1Q01538 1121 aa13.59□□□□□ -0.23
CHD2-210ENST00000627200 NEUROD1Q13562 356 aa13.59□□□□□ -0.23
CHD2-210ENST00000627200 CHRNA2Q15822 529 aa13.59□□□□□ -0.23
CHD2-210ENST00000627200 FAM98CQ17RN3 349 aaKnown RBP13.59□□□□□ -0.23
CHD2-210ENST00000627200 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
CHD2-210ENST00000627200 PRDM11Q9NQV5 511 aa13.59□□□□□ -0.23
CHD2-210ENST00000627200 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
CHD2-210ENST00000627200 BLMP54132 1417 aaPredicted RBP13.58□□□□□ -0.24
CHD2-210ENST00000627200 ONECUT3O60422 494 aaPredicted RBP13.58□□□□□ -0.24
CHD2-210ENST00000627200 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
CHD2-210ENST00000627200 NBPF8Q3BBV2 869 aa13.58□□□□□ -0.24
CHD2-210ENST00000627200 THSD7AQ9UPZ6 1657 aa13.57□□□□□ -0.24
CHD2-210ENST00000627200 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
CHD2-210ENST00000627200 DEFB132Q7Z7B7 95 aa13.57□□□□□ -0.24
CHD2-210ENST00000627200 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
CHD2-210ENST00000627200 KRT27Q7Z3Y8 459 aa13.56□□□□□ -0.24
CHD2-210ENST00000627200 SPATA31A5Q5VU36 1347 aa13.56□□□□□ -0.24
CHD2-210ENST00000627200 SPATA31A7Q8IWB4 1347 aa13.56□□□□□ -0.24
CHD2-210ENST00000627200 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
CHD2-210ENST00000627200 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
CHD2-210ENST00000627200 STRN4Q9NRL3 753 aa13.55□□□□□ -0.24
CHD2-210ENST00000627200 SRCAPQ6ZRS2 3230 aa13.55□□□□□ -0.24
CHD2-210ENST00000627200 ROCK2O75116 1388 aaKnown RBP13.55□□□□□ -0.24
CHD2-210ENST00000627200 LMO7Q8WWI1 1683 aa13.54□□□□□ -0.24
CHD2-210ENST00000627200 ABTB2Q8N961 1025 aa13.54□□□□□ -0.24
CHD2-210ENST00000627200 USP19O94966 1318 aa13.54□□□□□ -0.24
CHD2-210ENST00000627200 CAMTA1Q9Y6Y1 1673 aa13.53□□□□□ -0.24
CHD2-210ENST00000627200 USP6P35125 1406 aa13.53□□□□□ -0.24
CHD2-210ENST00000627200 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
CHD2-210ENST00000627200 CABP1Q9NZU7 370 aa13.52□□□□□ -0.25
CHD2-210ENST00000627200 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
CHD2-210ENST00000627200 SPATA31A1Q5TZJ5 1347 aa13.52□□□□□ -0.25
CHD2-210ENST00000627200 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
CHD2-210ENST00000627200 USP35Q9P2H5 1018 aa13.51□□□□□ -0.25
CHD2-210ENST00000627200 TNS1Q9HBL0 1735 aaKnown RBP13.5□□□□□ -0.25
CHD2-210ENST00000627200 CPDO75976 1380 aa13.5□□□□□ -0.25
CHD2-210ENST00000627200 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
CHD2-210ENST00000627200 SLIT3O75094 1523 aa13.49□□□□□ -0.25
CHD2-210ENST00000627200 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
CHD2-210ENST00000627200 SF3B2Q13435 895 aaKnown RBP13.49□□□□□ -0.25
CHD2-210ENST00000627200 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
CHD2-210ENST00000627200 AKAP12Q02952 1782 aa13.49□□□□□ -0.25
CHD2-210ENST00000627200 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
CHD2-210ENST00000627200 GCP02774 474 aa13.48□□□□□ -0.25
CHD2-210ENST00000627200 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
CHD2-210ENST00000627200 NLRP13Q86W25 1043 aa13.47□□□□□ -0.25
CHD2-210ENST00000627200 EVA1CP58658 441 aa13.46□□□□□ -0.25
CHD2-210ENST00000627200 NLRP6P59044 892 aa13.46□□□□□ -0.25
CHD2-210ENST00000627200 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
CHD2-210ENST00000627200 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
CHD2-210ENST00000627200 COL18A1P39060 1754 aa13.45□□□□□ -0.26
CHD2-210ENST00000627200 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
CHD2-210ENST00000627200 BAG6P46379 1132 aa13.44□□□□□ -0.26
CHD2-210ENST00000627200 TONSLQ96HA7 1378 aa13.44□□□□□ -0.26
CHD2-210ENST00000627200 TTC21BQ7Z4L5 1316 aa13.43□□□□□ -0.26
CHD2-210ENST00000627200 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
CHD2-210ENST00000627200 SOX12O15370 315 aa13.43□□□□□ -0.26
CHD2-210ENST00000627200 CPSF1Q10570 1443 aaKnown RBP13.43□□□□□ -0.26
CHD2-210ENST00000627200 BARGINQ6ZT62 677 aa13.43□□□□□ -0.26
CHD2-210ENST00000627200 CARD11Q9BXL7 1154 aa13.43□□□□□ -0.26
CHD2-210ENST00000627200 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
CHD2-210ENST00000627200 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 DISP2A7MBM2 1401 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 CRB1P82279 1406 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 TRIM37O94972 964 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 NFAT5O94916 1531 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 AATKQ6ZMQ8 1374 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
CHD2-210ENST00000627200 WNK3Q9BYP7 1800 aa13.41□□□□□ -0.26
CHD2-210ENST00000627200 RGPD5Q99666 1765 aa13.41□□□□□ -0.26
CHD2-210ENST00000627200 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
CHD2-210ENST00000627200 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
CHD2-210ENST00000627200 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
CHD2-210ENST00000627200 LRP5O75197 1615 aa13.39□□□□□ -0.27
CHD2-210ENST00000627200 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
CHD2-210ENST00000627200 PDE3BQ13370 1112 aa13.39□□□□□ -0.27
CHD2-210ENST00000627200 EZH2Q15910 746 aaKnown RBP13.39□□□□□ -0.27
CHD2-210ENST00000627200 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
CHD2-210ENST00000627200 RREB1Q92766 1687 aa13.38□□□□□ -0.27
CHD2-210ENST00000627200 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.271e-6■■□□□ 11.6
CHD2-210ENST00000627200 THRAP3Q9Y2W1 955 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms