RNA–Protein interactions for RNA: ENST00000627144.2

SMIM7-221, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene SMIM7, Length 2,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-221ENST00000627144 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
SMIM7-221ENST00000627144 METP08581 1390 aa13.36□□□□□ -0.27
SMIM7-221ENST00000627144 PDE3AQ14432 1141 aa13.35□□□□□ -0.27
SMIM7-221ENST00000627144 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
SMIM7-221ENST00000627144 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
SMIM7-221ENST00000627144 ANKLE2Q86XL3 938 aa13.35□□□□□ -0.27
SMIM7-221ENST00000627144 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
SMIM7-221ENST00000627144 ADAMTS13Q76LX8 1427 aa13.34□□□□□ -0.27
SMIM7-221ENST00000627144 MINK1Q8N4C8 1332 aaPredicted RBP13.34□□□□□ -0.27
SMIM7-221ENST00000627144 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
SMIM7-221ENST00000627144 PAK3O75914 559 aaPredicted RBP13.34□□□□□ -0.27
SMIM7-221ENST00000627144 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
SMIM7-221ENST00000627144 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
SMIM7-221ENST00000627144 ZNF142P52746 1687 aaPredicted RBP13.33□□□□□ -0.28
SMIM7-221ENST00000627144 NEUROD2Q15784 382 aa13.32□□□□□ -0.28
SMIM7-221ENST00000627144 U2AF1L5P0DN76 240 aaPredicted RBP13.32□□□□□ -0.28
SMIM7-221ENST00000627144 U2AF1Q01081 240 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMIM7-221ENST00000627144 FYB1O15117 783 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 HSPA2P54652 639 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 WAPLQ7Z5K2 1190 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 SKAP1Q86WV1 359 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 KIF20BQ96Q89 1820 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 HDGFL2Q7Z4V5 671 aaPredicted RBP13.31□□□□□ -0.28
SMIM7-221ENST00000627144 GGNBP2Q9H3C7 697 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 NCKAP5LQ9HCH0 1330 aa13.31□□□□□ -0.28
SMIM7-221ENST00000627144 CPS1P31327 1500 aa13.3□□□□□ -0.28
SMIM7-221ENST00000627144 TECPR2O15040 1411 aa13.3□□□□□ -0.28
SMIM7-221ENST00000627144 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
SMIM7-221ENST00000627144 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
SMIM7-221ENST00000627144 CDK19Q9BWU1 502 aa13.3□□□□□ -0.28
SMIM7-221ENST00000627144 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
SMIM7-221ENST00000627144 ATP7BP35670 1465 aa13.29□□□□□ -0.28
SMIM7-221ENST00000627144 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
SMIM7-221ENST00000627144 AAMPQ13685 434 aa13.28□□□□□ -0.28
SMIM7-221ENST00000627144 NPM2Q86SE8 214 aaKnown RBP13.28□□□□□ -0.28
SMIM7-221ENST00000627144 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
SMIM7-221ENST00000627144 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
SMIM7-221ENST00000627144 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.28
SMIM7-221ENST00000627144 PTPRUQ92729 1446 aa13.27□□□□□ -0.29
SMIM7-221ENST00000627144 CABP1Q9NZU7 370 aa13.27□□□□□ -0.29
SMIM7-221ENST00000627144 AMOTL2Q9Y2J4 779 aa13.27□□□□□ -0.29
SMIM7-221ENST00000627144 CDC42BPGQ6DT37 1551 aa13.26□□□□□ -0.29
SMIM7-221ENST00000627144 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
SMIM7-221ENST00000627144 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
SMIM7-221ENST00000627144 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
SMIM7-221ENST00000627144 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
SMIM7-221ENST00000627144 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
SMIM7-221ENST00000627144 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
SMIM7-221ENST00000627144 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
SMIM7-221ENST00000627144 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
SMIM7-221ENST00000627144 MAPK8IP3Q9UPT6 1336 aa13.24□□□□□ -0.29
SMIM7-221ENST00000627144 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
SMIM7-221ENST00000627144 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
SMIM7-221ENST00000627144 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
SMIM7-221ENST00000627144 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
SMIM7-221ENST00000627144 IGHDP01880 384 aa13.24□□□□□ -0.29
SMIM7-221ENST00000627144 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
SMIM7-221ENST00000627144 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
SMIM7-221ENST00000627144 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
SMIM7-221ENST00000627144 ANO8Q9HCE9 1232 aaPredicted RBP13.23□□□□□ -0.29
SMIM7-221ENST00000627144 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
SMIM7-221ENST00000627144 IL16Q14005 1332 aa13.23□□□□□ -0.29
SMIM7-221ENST00000627144 KCNA6P17658 529 aa13.22□□□□□ -0.29
SMIM7-221ENST00000627144 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
SMIM7-221ENST00000627144 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
SMIM7-221ENST00000627144 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
SMIM7-221ENST00000627144 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
SMIM7-221ENST00000627144 RGS3P49796 1198 aa13.21□□□□□ -0.29
SMIM7-221ENST00000627144 PMFBP1Q8TBY8 1022 aa13.21□□□□□ -0.29
SMIM7-221ENST00000627144 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.3
SMIM7-221ENST00000627144 RLBP1P12271 317 aa13.21□□□□□ -0.3
SMIM7-221ENST00000627144 LRRC7Q96NW7 1537 aa13.2□□□□□ -0.3
SMIM7-221ENST00000627144 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
SMIM7-221ENST00000627144 BCL2L13Q9BXK5 485 aa13.2□□□□□ -0.3
SMIM7-221ENST00000627144 AKAP12Q02952 1782 aa13.2□□□□□ -0.3
SMIM7-221ENST00000627144 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
SMIM7-221ENST00000627144 FCHSD2O94868 740 aa13.2□□□□□ -0.3
SMIM7-221ENST00000627144 NBR1Q14596 966 aa13.19□□□□□ -0.3
SMIM7-221ENST00000627144 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
SMIM7-221ENST00000627144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMIM7-221ENST00000627144 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
SMIM7-221ENST00000627144 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
SMIM7-221ENST00000627144 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
SMIM7-221ENST00000627144 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
SMIM7-221ENST00000627144 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
SMIM7-221ENST00000627144 RIPK4P57078 832 aa13.18□□□□□ -0.3
SMIM7-221ENST00000627144 TNNQ9UQP3 1299 aa13.18□□□□□ -0.3
SMIM7-221ENST00000627144 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
SMIM7-221ENST00000627144 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
SMIM7-221ENST00000627144 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
SMIM7-221ENST00000627144 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
SMIM7-221ENST00000627144 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
SMIM7-221ENST00000627144 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
SMIM7-221ENST00000627144 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
SMIM7-221ENST00000627144 CHD2O14647 1828 aaKnown RBP13.17□□□□□ -0.3
SMIM7-221ENST00000627144 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
SMIM7-221ENST00000627144 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
SMIM7-221ENST00000627144 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 686.9 ms