RNA–Protein interactions for RNA: ENST00000626177.2

CCDC163-202, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-202ENST00000626177 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
CCDC163-202ENST00000626177 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
CCDC163-202ENST00000626177 ATP7BP35670 1465 aa12.12□□□□□ -0.47
CCDC163-202ENST00000626177 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
CCDC163-202ENST00000626177 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
CCDC163-202ENST00000626177 DMRT2Q9Y5R5 561 aa12.1□□□□□ -0.47
CCDC163-202ENST00000626177 ZNF521Q96K83 1311 aa12.1□□□□□ -0.47
CCDC163-202ENST00000626177 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
CCDC163-202ENST00000626177 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
CCDC163-202ENST00000626177 ACEP12821 1306 aa12.09□□□□□ -0.47
CCDC163-202ENST00000626177 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
CCDC163-202ENST00000626177 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
CCDC163-202ENST00000626177 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
CCDC163-202ENST00000626177 KIF20BQ96Q89 1820 aa12.09□□□□□ -0.47
CCDC163-202ENST00000626177 ADGRB2O60241 1585 aa12.08□□□□□ -0.47
CCDC163-202ENST00000626177 ANKRD26Q9UPS8 1709 aa12.08□□□□□ -0.48
CCDC163-202ENST00000626177 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
CCDC163-202ENST00000626177 RNF123Q5XPI4 1314 aa12.08□□□□□ -0.48
CCDC163-202ENST00000626177 NKTRP30414 1462 aaKnown RBP12.08□□□□□ -0.48
CCDC163-202ENST00000626177 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
CCDC163-202ENST00000626177 PTCH1Q13635 1447 aa12.08□□□□□ -0.48
CCDC163-202ENST00000626177 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
CCDC163-202ENST00000626177 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.48
CCDC163-202ENST00000626177 CFAP53Q96M91 514 aa12.08□□□□□ -0.48
CCDC163-202ENST00000626177 DIP2AQ14689 1571 aa12.07□□□□□ -0.48
CCDC163-202ENST00000626177 EDC4Q6P2E9 1401 aaKnown RBP12.07□□□□□ -0.48
CCDC163-202ENST00000626177 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
CCDC163-202ENST00000626177 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC163-202ENST00000626177 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
CCDC163-202ENST00000626177 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
CCDC163-202ENST00000626177 SETD1BQ9UPS6 1966 aaKnown RBP12.06□□□□□ -0.48
CCDC163-202ENST00000626177 PLEKHG3A1L390 1219 aa12.06□□□□□ -0.48
CCDC163-202ENST00000626177 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
CCDC163-202ENST00000626177 RCAN3Q9UKA8 241 aa12.06□□□□□ -0.48
CCDC163-202ENST00000626177 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
CCDC163-202ENST00000626177 DUSP27Q5VZP5 1158 aa12.06□□□□□ -0.48
CCDC163-202ENST00000626177 TCP11L2Q8N4U5 519 aa12.06□□□□□ -0.48
CCDC163-202ENST00000626177 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
CCDC163-202ENST00000626177 RGPD8O14715 1765 aaPredicted RBP12.06□□□□□ -0.48
CCDC163-202ENST00000626177 AKAP12Q02952 1782 aa12.06□□□□□ -0.48
CCDC163-202ENST00000626177 MON2Q7Z3U7 1717 aa12.05□□□□□ -0.48
CCDC163-202ENST00000626177 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
CCDC163-202ENST00000626177 RRS1Q15050 365 aaKnown RBP12.05□□□□□ -0.48
CCDC163-202ENST00000626177 TTC21BQ7Z4L5 1316 aa12.05□□□□□ -0.48
CCDC163-202ENST00000626177 TOPAZ1Q8N9V7 1692 aa12.05□□□□□ -0.48
CCDC163-202ENST00000626177 SLFN5Q08AF3 891 aa12.05□□□□□ -0.48
CCDC163-202ENST00000626177 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
CCDC163-202ENST00000626177 ITSN1Q15811 1721 aa12.04□□□□□ -0.48
CCDC163-202ENST00000626177 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
CCDC163-202ENST00000626177 PLIN1O60240 522 aa12.03□□□□□ -0.48
CCDC163-202ENST00000626177 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
CCDC163-202ENST00000626177 NPHP4O75161 1426 aaPredicted RBP12.03□□□□□ -0.48
CCDC163-202ENST00000626177 PNPLA6Q8IY17 1366 aa12.03□□□□□ -0.48
CCDC163-202ENST00000626177 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
CCDC163-202ENST00000626177 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
CCDC163-202ENST00000626177 COG3Q96JB2 828 aa12.03□□□□□ -0.48
CCDC163-202ENST00000626177 RRP1P56182 461 aaKnown RBP12.02□□□□□ -0.48
CCDC163-202ENST00000626177 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.48
CCDC163-202ENST00000626177 TRMT2AQ8IZ69 625 aaKnown RBP12.02□□□□□ -0.48
CCDC163-202ENST00000626177 PLEKHF1Q96S99 279 aa12.02□□□□□ -0.48
CCDC163-202ENST00000626177 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.48
CCDC163-202ENST00000626177 USP6P35125 1406 aa12.02□□□□□ -0.49
CCDC163-202ENST00000626177 SOX12O15370 315 aa12.02□□□□□ -0.49
CCDC163-202ENST00000626177 NGDNQ8NEJ9 315 aaKnown RBP12.02□□□□□ -0.49
CCDC163-202ENST00000626177 IQSEC2Q5JU85 1478 aa12.01□□□□□ -0.49
CCDC163-202ENST00000626177 NRKQ7Z2Y5 1582 aa12.01□□□□□ -0.49
CCDC163-202ENST00000626177 HSPA2P54652 639 aa12.01□□□□□ -0.49
CCDC163-202ENST00000626177 PPP4R2Q9NY27 417 aa12.01□□□□□ -0.49
CCDC163-202ENST00000626177 SSH2Q76I76 1423 aa12□□□□□ -0.49
CCDC163-202ENST00000626177 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
CCDC163-202ENST00000626177 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
CCDC163-202ENST00000626177 HMOX1P09601 288 aa11.99□□□□□ -0.49
CCDC163-202ENST00000626177 IL13P35225 146 aa11.99□□□□□ -0.49
CCDC163-202ENST00000626177 NUTM2GQ5VZR2 741 aa11.99□□□□□ -0.49
CCDC163-202ENST00000626177 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
CCDC163-202ENST00000626177 ERICH6BQ5W0A0 696 aa11.98□□□□□ -0.49
CCDC163-202ENST00000626177 EXOC6Q8TAG9 804 aa11.98□□□□□ -0.49
CCDC163-202ENST00000626177 AATKQ6ZMQ8 1374 aa11.98□□□□□ -0.49
CCDC163-202ENST00000626177 C20orf194Q5TEA3 1177 aa11.98□□□□□ -0.49
CCDC163-202ENST00000626177 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
CCDC163-202ENST00000626177 OVOS2A0A0J9YW53 1432 aa11.97□□□□□ -0.49
CCDC163-202ENST00000626177 OVOS2Q6IE36 1432 aa11.97□□□□□ -0.49
CCDC163-202ENST00000626177 E9PSI1 815 aa11.97□□□□□ -0.49
CCDC163-202ENST00000626177 EIF5BO60841 1220 aaKnown RBP11.97□□□□□ -0.49
CCDC163-202ENST00000626177 TMPOP42166 694 aaKnown RBP11.96□□□□□ -0.49
CCDC163-202ENST00000626177 PHACTR3Q96KR7 559 aa11.96□□□□□ -0.49
CCDC163-202ENST00000626177 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
CCDC163-202ENST00000626177 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
CCDC163-202ENST00000626177 PRKAR2BP31323 418 aa11.96□□□□□ -0.49
CCDC163-202ENST00000626177 ANKARQ7Z5J8 1434 aa11.95□□□□□ -0.5
CCDC163-202ENST00000626177 BCAR3O75815 825 aa11.95□□□□□ -0.5
CCDC163-202ENST00000626177 HSP90AB2PQ58FF8 381 aa11.95□□□□□ -0.5
CCDC163-202ENST00000626177 PROSER2Q86WR7 435 aaPredicted RBP11.95□□□□□ -0.5
CCDC163-202ENST00000626177 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
CCDC163-202ENST00000626177 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
CCDC163-202ENST00000626177 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 NGEFQ8N5V2 710 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 ORAI2Q96SN7 254 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 MAPK8IP3Q9UPT6 1336 aa11.94□□□□□ -0.5
CCDC163-202ENST00000626177 CDK12Q9NYV4 1490 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms