RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 ANKRD26Q9UPS8 1709 aa17.33■□□□□ 0.37
SPTAN1-211ENST00000625980 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.37
SPTAN1-211ENST00000625980 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.37
SPTAN1-211ENST00000625980 ORAI2Q96SN7 254 aa17.33■□□□□ 0.37
SPTAN1-211ENST00000625980 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.36
SPTAN1-211ENST00000625980 HNRNPUQ00839 825 aaKnown RBP eCLIP17.33■□□□□ 0.36
SPTAN1-211ENST00000625980 MTHFSP49914 203 aa17.32■□□□□ 0.36
SPTAN1-211ENST00000625980 ATF3P18847 181 aa17.31■□□□□ 0.36
SPTAN1-211ENST00000625980 FBLN1P23142 703 aa17.31■□□□□ 0.36
SPTAN1-211ENST00000625980 C1orf167Q5SNV9 1468 aa17.31■□□□□ 0.36
SPTAN1-211ENST00000625980 XIRP1Q702N8 1843 aaKnown RBP17.3■□□□□ 0.36
SPTAN1-211ENST00000625980 COG3Q96JB2 828 aa17.3■□□□□ 0.36
SPTAN1-211ENST00000625980 MST1RQ04912 1400 aa17.29■□□□□ 0.36
SPTAN1-211ENST00000625980 DCCP43146 1447 aa17.29■□□□□ 0.36
SPTAN1-211ENST00000625980 MSH6P52701 1360 aa17.29■□□□□ 0.36
SPTAN1-211ENST00000625980 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
SPTAN1-211ENST00000625980 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
SPTAN1-211ENST00000625980 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.36
SPTAN1-211ENST00000625980 CADPS2Q86UW7 1296 aa17.27■□□□□ 0.35
SPTAN1-211ENST00000625980 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
SPTAN1-211ENST00000625980 OVOS2A0A0J9YW53 1432 aa17.26■□□□□ 0.35
SPTAN1-211ENST00000625980 OVOS2Q6IE36 1432 aa17.26■□□□□ 0.35
SPTAN1-211ENST00000625980 FOXO3O43524 673 aa17.26■□□□□ 0.35
SPTAN1-211ENST00000625980 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPTAN1-211ENST00000625980 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
SPTAN1-211ENST00000625980 PSME1Q06323 249 aa17.25■□□□□ 0.35
SPTAN1-211ENST00000625980 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
SPTAN1-211ENST00000625980 XPCQ01831 940 aaPredicted RBP17.24■□□□□ 0.35
SPTAN1-211ENST00000625980 NUTM2GQ5VZR2 741 aa17.24■□□□□ 0.35
SPTAN1-211ENST00000625980 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
SPTAN1-211ENST00000625980 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
SPTAN1-211ENST00000625980 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
SPTAN1-211ENST00000625980 EMILIN1Q9Y6C2 1016 aa17.23■□□□□ 0.35
SPTAN1-211ENST00000625980 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
SPTAN1-211ENST00000625980 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
SPTAN1-211ENST00000625980 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
SPTAN1-211ENST00000625980 BLMP54132 1417 aaPredicted RBP17.21■□□□□ 0.35
SPTAN1-211ENST00000625980 NLRP6P59044 892 aa17.21■□□□□ 0.35
SPTAN1-211ENST00000625980 ABTB2Q8N961 1025 aa17.21■□□□□ 0.35
SPTAN1-211ENST00000625980 SHPRHQ149N8 1683 aa17.21■□□□□ 0.35
SPTAN1-211ENST00000625980 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.35
SPTAN1-211ENST00000625980 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
SPTAN1-211ENST00000625980 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.34
SPTAN1-211ENST00000625980 INSRP06213 1382 aa17.2■□□□□ 0.34
SPTAN1-211ENST00000625980 SOX12O15370 315 aa17.2■□□□□ 0.34
SPTAN1-211ENST00000625980 KIF1AQ12756 1690 aa17.2■□□□□ 0.34
SPTAN1-211ENST00000625980 PNPLA6Q8IY17 1366 aa17.2■□□□□ 0.34
SPTAN1-211ENST00000625980 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
SPTAN1-211ENST00000625980 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
SPTAN1-211ENST00000625980 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
SPTAN1-211ENST00000625980 CCDC146Q8IYE0 955 aa17.18■□□□□ 0.34
SPTAN1-211ENST00000625980 SLAIN2Q9P270 581 aa17.18■□□□□ 0.34
SPTAN1-211ENST00000625980 LTBP4Q8N2S1 1624 aa17.17■□□□□ 0.34
SPTAN1-211ENST00000625980 MARF1Q9Y4F3 1742 aaKnown RBP17.17■□□□□ 0.34
SPTAN1-211ENST00000625980 BRINP3Q76B58 766 aa17.16■□□□□ 0.34
SPTAN1-211ENST00000625980 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
SPTAN1-211ENST00000625980 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
SPTAN1-211ENST00000625980 TRPM3Q9HCF6 1732 aaPredicted RBP17.15■□□□□ 0.34
SPTAN1-211ENST00000625980 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
SPTAN1-211ENST00000625980 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
SPTAN1-211ENST00000625980 MAP3K19Q56UN5 1328 aa17.14■□□□□ 0.33
SPTAN1-211ENST00000625980 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
SPTAN1-211ENST00000625980 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
SPTAN1-211ENST00000625980 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
SPTAN1-211ENST00000625980 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
SPTAN1-211ENST00000625980 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
SPTAN1-211ENST00000625980 NPHP3Q7Z494 1330 aa17.13■□□□□ 0.33
SPTAN1-211ENST00000625980 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
SPTAN1-211ENST00000625980 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
SPTAN1-211ENST00000625980 PEAK1Q9H792 1746 aa17.12■□□□□ 0.33
SPTAN1-211ENST00000625980 IL13P35225 146 aa17.12■□□□□ 0.33
SPTAN1-211ENST00000625980 PXDNQ92626 1479 aa17.1■□□□□ 0.33
SPTAN1-211ENST00000625980 APAF1O14727 1248 aa17.1■□□□□ 0.33
SPTAN1-211ENST00000625980 HSP90AB2PQ58FF8 381 aa17.1■□□□□ 0.33
SPTAN1-211ENST00000625980 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
SPTAN1-211ENST00000625980 AMPHP49418 695 aa17.08■□□□□ 0.32
SPTAN1-211ENST00000625980 EIF4A2Q14240 407 aaKnown RBP17.08■□□□□ 0.32
SPTAN1-211ENST00000625980 RUNDC1Q96C34 613 aa17.08■□□□□ 0.32
SPTAN1-211ENST00000625980 ALS2Q96Q42 1657 aa17.08■□□□□ 0.32
SPTAN1-211ENST00000625980 NFAT5O94916 1531 aa17.08■□□□□ 0.32
SPTAN1-211ENST00000625980 USP19O94966 1318 aa17.08■□□□□ 0.32
SPTAN1-211ENST00000625980 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
SPTAN1-211ENST00000625980 GCP02774 474 aa17.07■□□□□ 0.32
SPTAN1-211ENST00000625980 FLT4P35916 1363 aa17.07■□□□□ 0.32
SPTAN1-211ENST00000625980 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
SPTAN1-211ENST00000625980 SLIT3O75094 1523 aa17.06■□□□□ 0.32
SPTAN1-211ENST00000625980 KCNH5Q8NCM2 988 aa17.06■□□□□ 0.32
SPTAN1-211ENST00000625980 PLEKHF1Q96S99 279 aa17.06■□□□□ 0.32
SPTAN1-211ENST00000625980 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-211ENST00000625980 HMOX1P09601 288 aa17.05■□□□□ 0.32
SPTAN1-211ENST00000625980 HOXC9P31274 260 aa17.05■□□□□ 0.32
SPTAN1-211ENST00000625980 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
SPTAN1-211ENST00000625980 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
SPTAN1-211ENST00000625980 RSPH6AQ9H0K4 717 aa17.04■□□□□ 0.32
SPTAN1-211ENST00000625980 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
SPTAN1-211ENST00000625980 RRP7AQ9Y3A4 280 aaKnown RBP17.04■□□□□ 0.32
SPTAN1-211ENST00000625980 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
SPTAN1-211ENST00000625980 FCHSD2O94868 740 aa17.03■□□□□ 0.32
SPTAN1-211ENST00000625980 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
SPTAN1-211ENST00000625980 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms